Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d010116_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:99888781:99890778:-1 gene:Zm00001d010116 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

ATGACGCTGCGGATGGAGCCGCCGGTGCCGCCGCCGCGGCGGTCGGTGTCGACGACCTGC
GACCTTCACCCTGAGGAGACCTTCACGGGCTTCTGCGCCGCCTGCCTCCGCGAGCGCCTC
ACCGGGCTCGAGGCCAACGCCGCCGCGGCCGCCGCGCCGGGCCGCAAGTCCACCTCCGCT
ATCCGCTCGCTCTTTTCCCGGCCGTTCGCCGCTGCCGCCGGCGGAGGGCCCTCGGGCTCC
GGTGCCGCCGCGCTGCCGGACCTCCGCCGGTGCAAGTCTTTCTCCTGCGGGAGCGGGGGC
GACGCGCTGGCAGCCGCCGGCGGGGCGTACGAGCCGCAGCGGCGGTCGTGCGACGTGCGC
GGGCGGAGCACTCTCTGGGCGCTCTTCCACCAGGACGACCGCGAGAGGGTCCGCGACGGC
ACAGCGTTCGTCGCCTTCCCGGCCTCGTCCTCCACCGCCGCGGCCGCGCTCGCCGCCGAG
GTCCTTGCGCCGCCGCCCCCTCCGCCGGCCTGCGTCGCTGAGATGTTCTTGGAGGAGGAG
ATTGCTGTCGCCGAGGATTCCGACGAGATTGTTCCGGTGATGGAGCCCGTCTTGGTGGCC
GACACCTCTGAGGAGATGGAGACGGGGGTGAATGCGGCGCGGGATGTTAGGGCCATGAAG
GATCACATAGATCTCGAGTCTTCGCAGTCGCAGCAGCCCAAGAAGCCGCCGCCCAAGGAG
ATGGAGATCGCCGGGAGCTTCTGGCTTGCTGCCTCGGTGTTCAGCAAGAAGTGGCAGAAC
TGGAGGCGCAAGCAGAAGCTCAAGAAGCAGGAGGCCGCGGGCAGCAAGGCTGCTGCGGCG
GCAATGCCCCCACCGGAGAAGCCCTCCAAGCCATCGTTCCTCCGGCGCAGCCGCTTCCGC
CGTGGTGAAGCCGGCTCTGAGTTCGCCGGCGGGCGGCGCTCGTGTGACACCGATCTAAGA
TTCTCCCTCGACGCCGGGCGCATGTCCGTCGACGGCATGGGCTTCGCCTGGGACCAACCC
CGTGCGTCGTGGGACGGCTATCTGTTCGGCGCCGGCGCCGGCGCCGGCATTGCCCTCGGC
CGCGCGCCGCCGCCGCTCTCCCGCCTGCCTCCCATCCTCTCGGCTATGGAGGACTCCCCC
GCCGGCATCGTGGAGCGCTCCGACGGTCAAATCCCCGTGGAGGATGACTCCCAGCCGGAG
CCCGACCCCGACGCGAACGTCCCTGGGGGCTCGGCCCAGACGCGAGACTACTACATGGAC
ACGTCGAGCCGGAGGCGCCGGAGCCTTGACAGGTCCAGCTCTGTGCGGAGGTCCTTCGAA
GTCACCGACCCAAAGCCAGTGGCAGTGCCAGTACCAGTACCTGTTCCAGCGACCGCACCG
GCCGCCATGGTCAACGGCAAGGAATCCCCTCTAATGGGCAGCTCGGAGTTCTACCACTTC
CACCACGCCGAAGACCTGTTCGACCACCGGTTCAGCACCAACTCACTCGTCGAGGACTTC
TCCGCCAGCCTGGACGCCGCCTTCCCCGGCCCCGCGAAGAAGCCGCCGCGGCGGTGGCGC
AAGGCGTGGAGCCTCTGGGGCCTGATCCACCGCCGCGCCGCGGGGCGCGGGAACGGCGCG
GACCGCGCGTTCTCGGAGCCGTGGCCGGAGCTGCGCGTCCGCGGGCACAGCGGCAGGATG
CAGCGGTGCAACAGCAACGCGTGCGCGCGGAGCTCCTTCAGCAGCAACAGCGGCGGCGGG
CTGGGCAGCTCGAGGCGCAGCTACGTCGTGGACGCCCACGGCCACGCGAAGCGGAGGCGC
GAGGAGGGCGCGGCGCTGGAGCGGAACCGCAGCGCGCGGCACTCGCCGGGGCCGGGCACC
GCCGACAGCGGCATGCTCCGGTTGTACCTCACGCCGGTTCGGAGCGCCAGCGGCCGCCGG
ACCGCCGTCTTCCCTGTGAAAGGCAGGCGGCCGCTGAGGTCGCCGTCGTTGGCGCGGACG
ATGCTGGGGCTGTACTGA

Peptide Sequence

PEP ID

Zm00001d010116_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:99888781:99890778:-1 gene:Zm00001d010116 transcript:Zm00001d010116_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

MTLRMEPPVPPPRRSVSTTCDLHPEETFTGFCAACLRERLTGLEANAAAAAAPGRKSTSA
IRSLFSRPFAAAAGGGPSGSGAAALPDLRRCKSFSCGSGGDALAAAGGAYEPQRRSCDVR
GRSTLWALFHQDDRERVRDGTAFVAFPASSSTAAAALAAEVLAPPPPPPACVAEMFLEEE
IAVAEDSDEIVPVMEPVLVADTSEEMETGVNAARDVRAMKDHIDLESSQSQQPKKPPPKE
MEIAGSFWLAASVFSKKWQNWRRKQKLKKQEAAGSKAAAAAMPPPEKPSKPSFLRRSRFR
RGEAGSEFAGGRRSCDTDLRFSLDAGRMSVDGMGFAWDQPRASWDGYLFGAGAGAGIALG
RAPPPLSRLPPILSAMEDSPAGIVERSDGQIPVEDDSQPEPDPDANVPGGSAQTRDYYMD
TSSRRRRSLDRSSSVRRSFEVTDPKPVAVPVPVPVPATAPAAMVNGKESPLMGSSEFYHF
HHAEDLFDHRFSTNSLVEDFSASLDAAFPGPAKKPPRRWRKAWSLWGLIHRRAAGRGNGA
DRAFSEPWPELRVRGHSGRMQRCNSNACARSSFSSNSGGGLGSSRRSYVVDAHGHAKRRR
EEGAALERNRSARHSPGPGTADSGMLRLYLTPVRSASGRRTAVFPVKGRRPLRSPSLART
MLGLY

Transcript Sequence

Transcript ID

Zm00001d010116_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:99888781:99890778:-1 gene:Zm00001d010116 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

ATGACGCTGCGGATGGAGCCGCCGGTGCCGCCGCCGCGGCGGTCGGTGTCGACGACCTGC
GACCTTCACCCTGAGGAGACCTTCACGGGCTTCTGCGCCGCCTGCCTCCGCGAGCGCCTC
ACCGGGCTCGAGGCCAACGCCGCCGCGGCCGCCGCGCCGGGCCGCAAGTCCACCTCCGCT
ATCCGCTCGCTCTTTTCCCGGCCGTTCGCCGCTGCCGCCGGCGGAGGGCCCTCGGGCTCC
GGTGCCGCCGCGCTGCCGGACCTCCGCCGGTGCAAGTCTTTCTCCTGCGGGAGCGGGGGC
GACGCGCTGGCAGCCGCCGGCGGGGCGTACGAGCCGCAGCGGCGGTCGTGCGACGTGCGC
GGGCGGAGCACTCTCTGGGCGCTCTTCCACCAGGACGACCGCGAGAGGGTCCGCGACGGC
ACAGCGTTCGTCGCCTTCCCGGCCTCGTCCTCCACCGCCGCGGCCGCGCTCGCCGCCGAG
GTCCTTGCGCCGCCGCCCCCTCCGCCGGCCTGCGTCGCTGAGATGTTCTTGGAGGAGGAG
ATTGCTGTCGCCGAGGATTCCGACGAGATTGTTCCGGTGATGGAGCCCGTCTTGGTGGCC
GACACCTCTGAGGAGATGGAGACGGGGGTGAATGCGGCGCGGGATGTTAGGGCCATGAAG
GATCACATAGATCTCGAGTCTTCGCAGTCGCAGCAGCCCAAGAAGCCGCCGCCCAAGGAG
ATGGAGATCGCCGGGAGCTTCTGGCTTGCTGCCTCGGTGTTCAGCAAGAAGTGGCAGAAC
TGGAGGCGCAAGCAGAAGCTCAAGAAGCAGGAGGCCGCGGGCAGCAAGGCTGCTGCGGCG
GCAATGCCCCCACCGGAGAAGCCCTCCAAGCCATCGTTCCTCCGGCGCAGCCGCTTCCGC
CGTGGTGAAGCCGGCTCTGAGTTCGCCGGCGGGCGGCGCTCGTGTGACACCGATCTAAGA
TTCTCCCTCGACGCCGGGCGCATGTCCGTCGACGGCATGGGCTTCGCCTGGGACCAACCC
CGTGCGTCGTGGGACGGCTATCTGTTCGGCGCCGGCGCCGGCGCCGGCATTGCCCTCGGC
CGCGCGCCGCCGCCGCTCTCCCGCCTGCCTCCCATCCTCTCGGCTATGGAGGACTCCCCC
GCCGGCATCGTGGAGCGCTCCGACGGTCAAATCCCCGTGGAGGATGACTCCCAGCCGGAG
CCCGACCCCGACGCGAACGTCCCTGGGGGCTCGGCCCAGACGCGAGACTACTACATGGAC
ACGTCGAGCCGGAGGCGCCGGAGCCTTGACAGGTCCAGCTCTGTGCGGAGGTCCTTCGAA
GTCACCGACCCAAAGCCAGTGGCAGTGCCAGTACCAGTACCTGTTCCAGCGACCGCACCG
GCCGCCATGGTCAACGGCAAGGAATCCCCTCTAATGGGCAGCTCGGAGTTCTACCACTTC
CACCACGCCGAAGACCTGTTCGACCACCGGTTCAGCACCAACTCACTCGTCGAGGACTTC
TCCGCCAGCCTGGACGCCGCCTTCCCCGGCCCCGCGAAGAAGCCGCCGCGGCGGTGGCGC
AAGGCGTGGAGCCTCTGGGGCCTGATCCACCGCCGCGCCGCGGGGCGCGGGAACGGCGCG
GACCGCGCGTTCTCGGAGCCGTGGCCGGAGCTGCGCGTCCGCGGGCACAGCGGCAGGATG
CAGCGGTGCAACAGCAACGCGTGCGCGCGGAGCTCCTTCAGCAGCAACAGCGGCGGCGGG
CTGGGCAGCTCGAGGCGCAGCTACGTCGTGGACGCCCACGGCCACGCGAAGCGGAGGCGC
GAGGAGGGCGCGGCGCTGGAGCGGAACCGCAGCGCGCGGCACTCGCCGGGGCCGGGCACC
GCCGACAGCGGCATGCTCCGGTTGTACCTCACGCCGGTTCGGAGCGCCAGCGGCCGCCGG
ACCGCCGTCTTCCCTGTGAAAGGCAGGCGGCCGCTGAGGTCGCCGTCGTTGGCGCGGACG
ATGCTGGGGCTGTACTGA