Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d010109_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:8:99417653:99423706:-1 gene:Zm00001d010109 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	ATGGCTTCAATGGCAATCATTAGGAGAAGGAAGTATTTCTTGGATCATGTTAACACACCT ACCATTTCATCGTCTGCTTTCTTTACATTCCAACATGGAAGACTCGGTTTGGAGGTTGAG CCAAGAACAGAACAGCGATTTCTCGAGCATAGTTCTGGGGATTCCAAATGCGAGAAGGAG CAACACAATATGAATTTGATAAAAAAGGATCTACTAGGTCTTGGTAATGGGTTTTGGCAA CGTCCATCTTATGTGATTTCTCTTTCTCATGGTGGATTTGGAAGGAATGAATTTAGATTG CCTCTGAGCCTGGGAGCTAGATCTTTGCTGCAGTCGGTCCGCACAGCATCAACTGCAACA GCAAGGCAGCCTAAGATGGATACAGATGATGAACAGAGCGAGGACCACAAGCAAAATAAA AGGAAAAAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTCAGCACTGCA AAAGCTAAGGCTAAAGCTAAACAGGTACAAGAATCTCTGAAGGTTGGCCAATCAATTATA CAGAAATTTTGGGCAAGAGTCCTGGGTGTGGGCCCTGCTCTTCGTGCTGTTGCTTCAATG AGCAGGGCTGATTGGGCAGCAAAACTTAAGCATTGGAAGGATGAATTCGTTTGTACACTG CAGCATTACTGGTTAGGGACAAAACTACTCTGGGCAGATGTTAGGATCTCATCAAGATTG CTGGTGAAACTTGCTGGGGGGAAGAGCCTTTCAAGAAGAGAGAGGCAACAGCTGACACGC ACAACAGCAGATATCTTCAGGCTGGTTCCGTTTGCTGTGTTCATCATTGTTCCATTCATG GAATTCTTACTGCCAGTCTTCCTCAAGTTATTTCCAAACATGCTTCCATCAACTTTCCAG GACAAAATGAAGGAAGAGGAAGCATTAAAAAGGAAATTGAAAGCAAGGATGGAGTATGCA AAATTTTTGCAAGATACCGCAAAAGAAATGGCAAAGGAAGTTCAAACATCTCGTAGCGGA GAAACAAAACAAACAGCTGAAGATCTGGACGAATTTTTGAATAAGGTTAGGAGAGGTGGA CGTGTCTCTAATGATGAAATCTTGAATTTTGCAAAGCTATTCAATGATGAACTTACTCTG GATAACATGAACAGACCACGCTTGGTAAATATGTGCAAATATATGGGTATCCGGCCTTTT GGTACAGATCACTACATGAGGTTCATGCTTCGCAAAAAACTTCAGGACATTAAGAATGAT GATAAACTGATTCAAGCTGAGGGAGTTGAATCTCTCTCTGAAGAAGAGCTCCGGCAAGCC TGCCGGGAACGTGGTCATCTAGGCCTGCTGTCAACTGAAGAGATGTGCCAGCAGCTCCGA GACTGGTTGGACCTATCACTTAATCATGCTGTGCCATCTTCACTTCTCATACTTTCAAGA GCCTTTACTGTGTCTGGGAGAATGAAGCCAGAGGAGGCTGTTGTAGCAACACTATCTTCT TTACCAGACGAAGTTGTGGATACAATTGGGACAGTATTGCCATCTGAAGATTCAGTTTCT GAAAGGAGGAGAAAATTAGAATTCCTTGAGATGCAGGAAGAACTTATCAAG

Peptide Sequence

PEP ID	Zm00001d010109_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:8:99417653:99423706:-1 gene:Zm00001d010109 transcript:Zm00001d010109_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	MASMAIIRRRKYFLDHVNTPTISSSAFFTFQHGRLGLEVEPRTEQRFLEHSSGDSKCEKE QHNMNLIKKDLLGLGNGFWQRPSYVISLSHGGFGRNEFRLPLSLGARSLLQSVRTASTAT ARQPKMDTDDEQSEDHKQNKRKKEASPEECDQAVEGLSTAKAKAKAKQVQESLKVGQSII QKFWARVLGVGPALRAVASMSRADWAAKLKHWKDEFVCTLQHYWLGTKLLWADVRISSRL LVKLAGGKSLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFPNMLPSTFQ DKMKEEEALKRKLKARMEYAKFLQDTAKEMAKEVQTSRSGETKQTAEDLDEFLNKVRRGG RVSNDEILNFAKLFNDELTLDNMNRPRLVNMCKYMGIRPFGTDHYMRFMLRKKLQDIKND DKLIQAEGVESLSEEELRQACRERGHLGLLSTEEMCQQLRDWLDLSLNHAVPSSLLILSR AFTVSGRMKPEEAVVATLSSLPDEVVDTIGTVLPSEDSVSERRRKLEFLEMQEELIK

Transcript Sequence

Transcript ID	Zm00001d010109_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:99417653:99423706:-1 gene:Zm00001d010109 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence	CTCTCTCTCTCGGGCCGTGGCGTCGAGTGGGCGACCGCCGCCACCCCCGTGCCGTGCGCT CTCTCTCTCTCTCTCGTGTCGACGGGTGGGTGGGCGACCGTAGGCCGCCGCCGCCGCCTA GGCCAGGTGCCCAGGTCGACCTTCAACAGCGACGAGCATCCACCAGACGCAATCAAGTAT GGCTTCAATGGCAATCATTAGGAGAAGGAAGTATTTCTTGGATCATGTTAACACACCTAC CATTTCATCGTCTGCTTTCTTTACATTCCAACATGGAAGACTCGGTTTGGAGGTTGAGCC AAGAACAGAACAGCGATTTCTCGAGCATAGTTCTGGGGATTCCAAATGCGAGAAGGAGCA ACACAATATGAATTTGATAAAAAAGGATCTACTAGGTCTTGGTAATGGGTTTTGGCAACG TCCATCTTATGTGATTTCTCTTTCTCATGGTGGATTTGGAAGGAATGAATTTAGATTGCC TCTGAGCCTGGGAGCTAGATCTTTGCTGCAGTCGGTCCGCACAGCATCAACTGCAACAGC AAGGCAGCCTAAGATGGATACAGATGATGAACAGAGCGAGGACCACAAGCAAAATAAAAG GAAAAAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTCAGCACTGCAAA AGCTAAGGCTAAAGCTAAACAGGTACAAGAATCTCTGAAGGTTGGCCAATCAATTATACA GAAATTTTGGGCAAGAGTCCTGGGTGTGGGCCCTGCTCTTCGTGCTGTTGCTTCAATGAG CAGGGCTGATTGGGCAGCAAAACTTAAGCATTGGAAGGATGAATTCGTTTGTACACTGCA GCATTACTGGTTAGGGACAAAACTACTCTGGGCAGATGTTAGGATCTCATCAAGATTGCT GGTGAAACTTGCTGGGGGGAAGAGCCTTTCAAGAAGAGAGAGGCAACAGCTGACACGCAC AACAGCAGATATCTTCAGGCTGGTTCCGTTTGCTGTGTTCATCATTGTTCCATTCATGGA ATTCTTACTGCCAGTCTTCCTCAAGTTATTTCCAAACATGCTTCCATCAACTTTCCAGGA CAAAATGAAGGAAGAGGAAGCATTAAAAAGGAAATTGAAAGCAAGGATGGAGTATGCAAA ATTTTTGCAAGATACCGCAAAAGAAATGGCAAAGGAAGTTCAAACATCTCGTAGCGGAGA AACAAAACAAACAGCTGAAGATCTGGACGAATTTTTGAATAAGGTTAGGAGAGGTGGACG TGTCTCTAATGATGAAATCTTGAATTTTGCAAAGCTATTCAATGATGAACTTACTCTGGA TAACATGAACAGACCACGCTTGGTAAATATGTGCAAATATATGGGTATCCGGCCTTTTGG TACAGATCACTACATGAGGTTCATGCTTCGCAAAAAACTTCAGGACATTAAGAATGATGA TAAACTGATTCAAGCTGAGGGAGTTGAATCTCTCTCTGAAGAAGAGCTCCGGCAAGCCTG CCGGGAACGTGGTCATCTAGGCCTGCTGTCAACTGAAGAGATGTGCCAGCAGCTCCGAGA CTGGTTGGACCTATCACTTAATCATGCTGTGCCATCTTCACTTCTCATACTTTCAAGAGC CTTTACTGTGTCTGGGAGAATGAAGCCAGAGGAGGCTGTTGTAGCAACACTATCTTCTTT ACCAGACGAAGTTGTGGATACAATTGGGACAGTATTGCCATCTGAAGATTCAGTTTCTGA AAGGAGGAGAAAATTAGAATTCCTTGAGATGCAGGAAGAACTTATCAAGG