Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009990_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:93603801:93617450:1 gene:Zm00001d009990 gene_biotype:protein_coding transcript_biotype:protein_coding description:Superoxide dismutase

Sequence

ATGGCTCTCCGCACCCTGGCATCGAAGAACGCCCTATCCTTCGCGCTCGGCGGCGCGGCC
CGGCCGTCGGCGGCGTCCGCGAGGGGGGTGACGACGGTCGCGCTCCCCGACCTCTCCTAC
GACTTCGGCGCGCTGGAGCCGGCCATCTCGGGGGAGATCATGCGCCTGCACCACCAGAAG
CACCACGCCACCTACGTCGCCAACTACAACAAGGCGCTGGAGCAGCTCGACGCTGCCGTC
GCCAAGGGCGACGCCTCCGCTGTCGTCCAGCTCCAGGGCGCCATCAAGTTCAACGGCGGC
GGTCATGTGAACCATTCAATCTTTTGGAAGAACCTCAAGCCTATTAGCGAAGGTGGTGGG
GAGCCGCCACATGGGAAACTTGGCTGGGCCATCGATGAGGATTTTGGTTCATTTGAGGCA
CTTGTAAAGAGGATGAATGCAGAAGGCGCTGCTTTACAAGGATCTGGATGGGTGTGGTTA
GCTTTGGATAAAGAGGCAAAAAAGCTTTCAGTTGAAACTACAGCTAATCAGGATCCTCTG
GTGACTAAAGGTGCAAGCTTGGTTCCGCTGTTGGGGATTGATGTCTGGGAGCATGCGTAC
TACCTGCAGTACAAGAATGTTAGGCCGGATTACCTGAACAACATCTGGAAGGTGATGAAC
TGGAAATATGCTGGAGAGGTGTACGAAAATGTTCTTGCTTGA

Peptide Sequence

PEP ID

Zm00001d009990_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:93603801:93617450:1 gene:Zm00001d009990 transcript:Zm00001d009990_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Superoxide dismutase

Sequence

MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPAISGEIMRLHHQK
HHATYVANYNKALEQLDAAVAKGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGG
EPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKLSVETTANQDPL
VTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYENVLA

Transcript Sequence

Transcript ID

Zm00001d009990_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:93603801:93617450:1 gene:Zm00001d009990 gene_biotype:protein_coding transcript_biotype:protein_coding description:Superoxide dismutase

Sequence

ATCTAGTCTAGTACACGAATCACGAACGCGTCCACCTGCGCGCATCGCCACGCAGGTTCT
CTCCACCAAACCTTAACCTCCCCTTCCAGAAACCCTCCAAGAGGCAGCTCAAAGGAATAG
TGAGCCGCCCCGCCGCTCCTCAGCCATCCTCTCCATCTCGGTGTCACACACTCCGCATAC
GCACCTACGAGAGTCGAGTGACAGCGAGCGAGCGAGCGAGCGAAGCCATGGCTCTCCGCA
CCCTGGCATCGAAGAACGCCCTATCCTTCGCGCTCGGCGGCGCGGCCCGGCCGTCGGCGG
CGTCCGCGAGGGGGGTGACGACGGTCGCGCTCCCCGACCTCTCCTACGACTTCGGCGCGC
TGGAGCCGGCCATCTCGGGGGAGATCATGCGCCTGCACCACCAGAAGCACCACGCCACCT
ACGTCGCCAACTACAACAAGGCGCTGGAGCAGCTCGACGCTGCCGTCGCCAAGGGCGACG
CCTCCGCTGTCGTCCAGCTCCAGGGCGCCATCAAGTTCAACGGCGGCGGTCATGTGAACC
ATTCAATCTTTTGGAAGAACCTCAAGCCTATTAGCGAAGGTGGTGGGGAGCCGCCACATG
GGAAACTTGGCTGGGCCATCGATGAGGATTTTGGTTCATTTGAGGCACTTGTAAAGAGGA
TGAATGCAGAAGGCGCTGCTTTACAAGGATCTGGATGGGTGTGGTTAGCTTTGGATAAAG
AGGCAAAAAAGCTTTCAGTTGAAACTACAGCTAATCAGGATCCTCTGGTGACTAAAGGTG
CAAGCTTGGTTCCGCTGTTGGGGATTGATGTCTGGGAGCATGCGTACTACCTGCAGTACA
AGAATGTTAGGCCGGATTACCTGAACAACATCTGGAAGGTGATGAACTGGAAATATGCTG
GAGAGGTGTACGAAAATGTTCTTGCTTGAATTGTCTTAATGGACAATACTCATCTGCGCG
GGTTTGTTTTCGGCTGTTTGACCATGTGAAATAAAGATGGACTTGTGTACCTGCTGGACC
AAGTGTACATTTCGCTAAGATAGACTAACGCACAATGGCCTGCCGATTTTGTCCATCCTG
TATTCCTGCTTGCGTGCCACTCCACTTTCTGCTGCTCGTAGTGGCAGGCACATAGTATGT
GCTTAACGTTAGACTACGGCACGGCCCTTTCAGAGTTCGAGCATGGTGATGCCCAAAAGA
ACCATTTCTACTCTTGTCTCCATTAATAAAATCTGCCGAGGTGCCGATGTTTGCTTGAAT
TTGTTGCCATGCGTTTCCAGTTTTTGGCCTTCACACTTGTTGCAGCAAAATCTTGCAAAT
CATCTTCATTAGGCATCATGTTTGTGTTGAGC