Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009936_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:90588929:90590148:1 gene:Zm00001d009936 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic endochitinase A

Sequence

ATGTCGACACCAGGAGCCCCGAGCCTGGCCACGACAGCGGCGGCTGTCCTGTGCGTCCTG
GCCGCGGCGCTCGCGGTCACGGTCGCGAGCGGCCAGCAGTGCGGGCAGCAGGCCGGCGGC
GCAACGTGCCGCGACTGCCTCTGCTGCAGCCGCTTCGGCTTTTGCGGCGACACCTCCGAG
TACTGCGGCGCCGGGTGCCAGAGCCAGTGCACCGGCTGCGGCCCGCGTCCCGCGGGCCCC
GGCGTGGCATCCGTCGTGCCGAGAGACCTCTTCGAGCGGCTGCTCCTCCACCGCAACGAC
GCGGCGTGCCCTGCGCGCGGGTTCTACACCTACGACGCGTTCCTGGCCGCCGCGGCCGCG
TTCCCGGCCTTCGGCACGACGGGCGGCGACGAGCAGCGGAAACGGGAGGTCGCGGCGTTC
CTGGGCCAGACCTCCCACGAGACCACGGGCGGGTGGCCGACCGCGCCCGACGGGCCCTTC
TCGTGGGGTTACTGCTTCAAGCAGGAGCGCAACCCGCCGTCGGACTACTGCGAGCCGCGG
CCGCAGTGGCCGTGCGCGCCCGGCAAGAAGTACTTCGGCCGCGGCCCCATCCAGATCTCC
TTCAACTACAACTACGGCCCGGCGGGGCGAGCCATCGGCGTGGACCTCCTCAACAACCCG
GACCTCGTCGCGACGGACCCCGTGATATCCTTCAAGACAGCGCTGTGGTTCTGGATGAAC
GCGCGGGACAACAAGCCGTCGTGCCACGCCGTGATCACGGGGCAGTGGACGCCCACGGCT
GCGGACAGGGCGGCCGGCCGGGGCGCGCCAGGGTACGGCGTGATCACCAACATCATCAAC
GGTGGGATCGAGTGCGGGCACGGGACGGACCCCCGGGTCACCGACCGGATTGGCTTCTAC
AAGCGCTACTGCGATGTCTTCCGCATCGGCTACGGGAGCAATCTCGATTGCGACGGCCAG
AGGCCCTTCAATAGCGGACTGGCGGTTGAGGTGGCGGCGCAGTGA

Peptide Sequence

PEP ID

Zm00001d009936_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:90588929:90590148:1 gene:Zm00001d009936 transcript:Zm00001d009936_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic endochitinase A

Sequence

MSTPGAPSLATTAAAVLCVLAAALAVTVASGQQCGQQAGGATCRDCLCCSRFGFCGDTSE
YCGAGCQSQCTGCGPRPAGPGVASVVPRDLFERLLLHRNDAACPARGFYTYDAFLAAAAA
FPAFGTTGGDEQRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQERNPPSDYCEPR
PQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMN
ARDNKPSCHAVITGQWTPTAADRAAGRGAPGYGVITNIINGGIECGHGTDPRVTDRIGFY
KRYCDVFRIGYGSNLDCDGQRPFNSGLAVEVAAQ

Transcript Sequence

Transcript ID

Zm00001d009936_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:90588929:90590148:1 gene:Zm00001d009936 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic endochitinase A

Sequence

AAAGACCAAAGGATGTCGACACCAGGAGCCCCGAGCCTGGCCACGACAGCGGCGGCTGTC
CTGTGCGTCCTGGCCGCGGCGCTCGCGGTCACGGTCGCGAGCGGCCAGCAGTGCGGGCAG
CAGGCCGGCGGCGCAACGTGCCGCGACTGCCTCTGCTGCAGCCGCTTCGGCTTTTGCGGC
GACACCTCCGAGTACTGCGGCGCCGGGTGCCAGAGCCAGTGCACCGGCTGCGGCCCGCGT
CCCGCGGGCCCCGGCGTGGCATCCGTCGTGCCGAGAGACCTCTTCGAGCGGCTGCTCCTC
CACCGCAACGACGCGGCGTGCCCTGCGCGCGGGTTCTACACCTACGACGCGTTCCTGGCC
GCCGCGGCCGCGTTCCCGGCCTTCGGCACGACGGGCGGCGACGAGCAGCGGAAACGGGAG
GTCGCGGCGTTCCTGGGCCAGACCTCCCACGAGACCACGGGCGGGTGGCCGACCGCGCCC
GACGGGCCCTTCTCGTGGGGTTACTGCTTCAAGCAGGAGCGCAACCCGCCGTCGGACTAC
TGCGAGCCGCGGCCGCAGTGGCCGTGCGCGCCCGGCAAGAAGTACTTCGGCCGCGGCCCC
ATCCAGATCTCCTTCAACTACAACTACGGCCCGGCGGGGCGAGCCATCGGCGTGGACCTC
CTCAACAACCCGGACCTCGTCGCGACGGACCCCGTGATATCCTTCAAGACAGCGCTGTGG
TTCTGGATGAACGCGCGGGACAACAAGCCGTCGTGCCACGCCGTGATCACGGGGCAGTGG
ACGCCCACGGCTGCGGACAGGGCGGCCGGCCGGGGCGCGCCAGGGTACGGCGTGATCACC
AACATCATCAACGGTGGGATCGAGTGCGGGCACGGGACGGACCCCCGGGTCACCGACCGG
ATTGGCTTCTACAAGCGCTACTGCGATGTCTTCCGCATCGGCTACGGGAGCAATCTCGAT
TGCGACGGCCAGAGGCCCTTCAATAGCGGACTGGCGGTTGAGGTGGCGGCGCAGTGAAAA
CGTGTGTGTGTGTGTGTGACTGTGTGTTGCTTCGTCGGTTTGAATAAATTTCATGTAAAA
ACCGGTGCTTCATCCGAAAATAAGGCACTTTACTTATGCAAA