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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009929_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:90224127:90225398:1 gene:Zm00001d009929 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-propeller domain of methanol dehydrogenase type%3B Beta-propeller domains of methanol dehydrogenase type

Sequence

ATGGAGACCCTCCTCTCCCCCTCCACATTGTTCACGCTACCACTCCGTGGCTCCAGCAGG
AGACCGTCTCTGGCTGCTAGCGTCTCGTCCAGGCCCACCGTGTCCTGCTCCAGCGCGCTC
AAGAGGCCACAGGCCGGCGCCGTCGCTGCCTCCTCCCATGGAGACGGCGTCGGCAGGAAC
TGGATGTCGTTCCTGCACCACGGCCTGGCGGCGGCCGCGCTGTCGCTGGCCATCGGCCTG
ACCCCGGCGCCCGCGCCGGCGGTGGCGTCGGAGTTCGACGTGCTGAACGACGGGGCCCCC
GTGGACTCCTACGTGGTGGACGACGCCGGCGTGCTGAGCCGCGTCACCAAGTCCGACGTC
AAGCGGCTTGCCCGCGACCTCGAGGCCCGCAAGAACATCCGCCTCAACTTCATCACCGTC
CGCAAGCTCACGAGCAAGGCTGACGCGTTCGAGTACGCGGACCAAGTCCTGGAGAAGTGG
TACCCCACGATTGAGGAGGGCAACAACAAGGGCATCGTGGTGCTCGTCACAAGCCAGAAG
GAGGGCGCCGTCACCGGGGGGCCCGCCTTCATCCAGGCCGTCGGCGACCAGATTCTCGAC
GCCACCGTGTCTGAGAACCTCCCAGTCCTCGCGACCGACGAGAAGTACAACGAGGCGATC
TTGAGCACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACACTGGTGGCCCG
TCGTTCAAGGAGAACAAGCGGGAGTCCAACTTCAAGACCAAGGAGGAGACGGAGGAGAAG
CGCGGGCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCGTCGTCGTGCCCATG
GCGCAGTACTACGCCTACGTGTCCAAGAAGTGA

Peptide Sequence

PEP ID

Zm00001d009929_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:90224127:90225398:1 gene:Zm00001d009929 transcript:Zm00001d009929_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-propeller domain of methanol dehydrogenase type%3B Beta-propeller domains of methanol dehydrogenase type

Sequence

METLLSPSTLFTLPLRGSSRRPSLAASVSSRPTVSCSSALKRPQAGAVAASSHGDGVGRN
WMSFLHHGLAAAALSLAIGLTPAPAPAVASEFDVLNDGAPVDSYVVDDAGVLSRVTKSDV
KRLARDLEARKNIRLNFITVRKLTSKADAFEYADQVLEKWYPTIEEGNNKGIVVLVTSQK
EGAVTGGPAFIQAVGDQILDATVSENLPVLATDEKYNEAILSTAKRLAAAIDGLPDTGGP
SFKENKRESNFKTKEETEEKRGQFTLVVGGLLVIAVVVPMAQYYAYVSKK

Transcript Sequence

Transcript ID

Zm00001d009929_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:90224127:90225398:1 gene:Zm00001d009929 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-propeller domain of methanol dehydrogenase type%3B Beta-propeller domains of methanol dehydrogenase type

Sequence

AGCGCCCTCACAATGCGAGCGTGATTCCTCCCCTCCATCCCGGCTCGAGCTCCCCGCGGC
AGCAATGGAGACCCTCCTCTCCCCCTCCACATTGTTCACGCTACCACTCCGTGGCTCCAG
CAGGAGACCGTCTCTGGCTGCTAGCGTCTCGTCCAGGCCCACCGTGTCCTGCTCCAGCGC
GCTCAAGAGGCCACAGGCCGGCGCCGTCGCTGCCTCCTCCCATGGAGACGGCGTCGGCAG
GAACTGGATGTCGTTCCTGCACCACGGCCTGGCGGCGGCCGCGCTGTCGCTGGCCATCGG
CCTGACCCCGGCGCCCGCGCCGGCGGTGGCGTCGGAGTTCGACGTGCTGAACGACGGGGC
CCCCGTGGACTCCTACGTGGTGGACGACGCCGGCGTGCTGAGCCGCGTCACCAAGTCCGA
CGTCAAGCGGCTTGCCCGCGACCTCGAGGCCCGCAAGAACATCCGCCTCAACTTCATCAC
CGTCCGCAAGCTCACGAGCAAGGCTGACGCGTTCGAGTACGCGGACCAAGTCCTGGAGAA
GTGGTACCCCACGATTGAGGAGGGCAACAACAAGGGCATCGTGGTGCTCGTCACAAGCCA
GAAGGAGGGCGCCGTCACCGGGGGGCCCGCCTTCATCCAGGCCGTCGGCGACCAGATTCT
CGACGCCACCGTGTCTGAGAACCTCCCAGTCCTCGCGACCGACGAGAAGTACAACGAGGC
GATCTTGAGCACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACACTGGTGG
CCCGTCGTTCAAGGAGAACAAGCGGGAGTCCAACTTCAAGACCAAGGAGGAGACGGAGGA
GAAGCGCGGGCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCGTCGTCGTGCC
CATGGCGCAGTACTACGCCTACGTGTCCAAGAAGTGAGCGAACCATGAATATGGCGTGCT
GTGTACAGTAAATCAGTAATGTTATACCGAAGAGGGTTTTTTTTTTAATCTCCCAGGTTG
AAGTTCTTCGATCTGTTGGAATTCATAGAAATGGACGGAAAAAAATGATTATTATGCTT