Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009811_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:8:82523797:82526165:1 gene:Zm00001d009811 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 4A
Sequence

ATGAAGAGAAAGGTGCATTCAGGAAAATCCCGCTCATGGTGGTGGAACAGTCATATTAGT
CCACAAAATTCTAAGTGTCTCTCTGAAAATCTAGAAGAAATGGAGAAACAGGTGAAACAA
ATGTTGGGGCTCATTGGCGATGGAGAGTTCTCTACAGAAAAAGCTGAGGTGTTCTATGAG
AAGCGACCTTTACTTATTTCTCATGTGGAGAACTTCTATCGTATGTATCGTGCTCTTGCT
GCACGATATGACAGTGTAACTGAACAACTGCGCAAAAACATTCCATCATCTCTTCAATCA
TATGGCTCATTTGGTGTCTCTGAATCAGATTCTGAGACACAACGTTCGTCATCTCCAGAG
TCTGATGTCCAAGAAAATATGCCACGGCAAAAGCAAAAGCATGGACCAGATTTCCTTGAC
ATCTCTGCTGGCTCTGGTGTTGGCTGTGATGTATCAAAGAAGGGTAGTGAAAGGTCTTCA
TCATTTTCAGTTTCTGATTCAGAGCTTGATGAGGCCAAAGAGGAAAATGGAAGTATTTTT
TATGCCCTGAGCCAAAAAATTGTTGAGCTAGAAGATGCGCTTCAAGAAGCAAGGAAAGAA
CTTGATGCTTTAGAAGAAAAGCATGCACATTGCCAGAATGATTTGAGTACGAACTCAAAA
GTTGCTGAACATGAAGAAAAACTGCATACTTCAGATGTGGAATCCGACAACCTTAAGAAG
GATCCAGAAGAAACGGATTCTGCTTTAGAGAGCTCAACAGAAGTCAACAGCCAAAAGGAA
GCATTGGAAGCTGTGCTGTTTGAGCGCAAAAATGAAATCGAAATTCTGAAAGGTGCAATG
GCCTCAGCTGCTAAGCAATTTGACGTTGAATTGGAACATCGTGATCTTGAAATTGATAAG
TGCAAGCATGAACTTGGAGTACTCTCAGAGAAGTATTTGCATGATAAGTCTACTCTTGAG
GATGAGCTTAGAAAGCTCCATGGAGTCATCAAGAATATGGAAGGTGACCTAGAAAAAAAT
TCACAGGAGAAAATGCAGCTCAAGTCTCGGATTAAAGAACTTGAGCAGGCAGCTCACAGC
TTAGAACGTTCAACTTCCGAGATAGTTAAGCTACAAGAAGTAATAAGGAATACACAAGCG
GAATTAGAAAAGGTTACAGAGGATAAAATTGTGCTCAAAGAACGCGCTAACGAATTTGAG
CAACTTTTAAGGGCCCTTAAGGTCTCAGGTACAGAGGTTGCAAAGCTACCAGAAACTATC
AAGAACCTGGAAGCTCAGCTAGAAAGAGCCTTAGAAGAGAAATCAATACTTCAAGACCAG
ATCAAGCAGCTGGAGCAGGTTATGTCTGAATCTTTGGAGAAACATTCACATGAGCAGTCC
TCTCTTGCTGCTGACCTTTTGAAGTTATCTGAAGCGAACACTTCACTTGGAGGCAAATTA
TCCTCTGTGGCGGCAGAGCTTGTGCAAGTTTATGCTGATAAGGAAGAAGAATCTCTTGAT
AATGAGAAGCAAATTTCTGTCCTCAATCAAGATATTGCCGATCTGAGGAGAAAGCTTGAA
TTGTTATCATCTGAGAAAGCCGCAGTTGATGATGAGTTGGCCAAACTGCTAGCTGATATT
ACGACTCGTGACGAAAAGACGAAGCGAATGGATGACCACCTAAATCAGCTTCAGTTTGAG
CATGCCAAGCTGATGGCAGAATTTGACACCGCACACAGGTCCTTGTCAGAGCTGTGTGCA
CAGGTTTCTGAGCTGGAAGAAGAGGTAGAGAAGCAGAAGCTTGTAATATCCGAGACTGCA
GAGGGAAAACGAGAGGCTATCAGGCAGCTGTGCTTCTCCATTGAACACTACCGCAGCGGG
TATCAGCAGCTGAGGCAGCTGTTGCAAGGCCACAGGAGGCCGTTGGTGATGGCAACCTGA

Peptide Sequence

PEP ID

Zm00001d009811_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:8:82523797:82526165:1 gene:Zm00001d009811 transcript:Zm00001d009811_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 4A
Sequence

MKRKVHSGKSRSWWWNSHISPQNSKCLSENLEEMEKQVKQMLGLIGDGEFSTEKAEVFYE
KRPLLISHVENFYRMYRALAARYDSVTEQLRKNIPSSLQSYGSFGVSESDSETQRSSSPE
SDVQENMPRQKQKHGPDFLDISAGSGVGCDVSKKGSERSSSFSVSDSELDEAKEENGSIF
YALSQKIVELEDALQEARKELDALEEKHAHCQNDLSTNSKVAEHEEKLHTSDVESDNLKK
DPEETDSALESSTEVNSQKEALEAVLFERKNEIEILKGAMASAAKQFDVELEHRDLEIDK
CKHELGVLSEKYLHDKSTLEDELRKLHGVIKNMEGDLEKNSQEKMQLKSRIKELEQAAHS
LERSTSEIVKLQEVIRNTQAELEKVTEDKIVLKERANEFEQLLRALKVSGTEVAKLPETI
KNLEAQLERALEEKSILQDQIKQLEQVMSESLEKHSHEQSSLAADLLKLSEANTSLGGKL
SSVAAELVQVYADKEEESLDNEKQISVLNQDIADLRRKLELLSSEKAAVDDELAKLLADI
TTRDEKTKRMDDHLNQLQFEHAKLMAEFDTAHRSLSELCAQVSELEEEVEKQKLVISETA
EGKREAIRQLCFSIEHYRSGYQQLRQLLQGHRRPLVMAT

Transcript Sequence

Transcript ID

Zm00001d009811_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:82523797:82526165:1 gene:Zm00001d009811 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 4A
Sequence

TTTTGAATCTCAATTAGCTCTGCATATCAGAGGAGATTTTCTTATATTTTGGTGAAGATG
AAGAGAAAGGTGCATTCAGGAAAATCCCGCTCATGGTGGTGGAACAGTCATATTAGTCCA
CAAAATTCTAAGTGTCTCTCTGAAAATCTAGAAGAAATGGAGAAACAGGTGAAACAAATG
TTGGGGCTCATTGGCGATGGAGAGTTCTCTACAGAAAAAGCTGAGGTGTTCTATGAGAAG
CGACCTTTACTTATTTCTCATGTGGAGAACTTCTATCGTATGTATCGTGCTCTTGCTGCA
CGATATGACAGTGTAACTGAACAACTGCGCAAAAACATTCCATCATCTCTTCAATCATAT
GGCTCATTTGGTGTCTCTGAATCAGATTCTGAGACACAACGTTCGTCATCTCCAGAGTCT
GATGTCCAAGAAAATATGCCACGGCAAAAGCAAAAGCATGGACCAGATTTCCTTGACATC
TCTGCTGGCTCTGGTGTTGGCTGTGATGTATCAAAGAAGGGTAGTGAAAGGTCTTCATCA
TTTTCAGTTTCTGATTCAGAGCTTGATGAGGCCAAAGAGGAAAATGGAAGTATTTTTTAT
GCCCTGAGCCAAAAAATTGTTGAGCTAGAAGATGCGCTTCAAGAAGCAAGGAAAGAACTT
GATGCTTTAGAAGAAAAGCATGCACATTGCCAGAATGATTTGAGTACGAACTCAAAAGTT
GCTGAACATGAAGAAAAACTGCATACTTCAGATGTGGAATCCGACAACCTTAAGAAGGAT
CCAGAAGAAACGGATTCTGCTTTAGAGAGCTCAACAGAAGTCAACAGCCAAAAGGAAGCA
TTGGAAGCTGTGCTGTTTGAGCGCAAAAATGAAATCGAAATTCTGAAAGGTGCAATGGCC
TCAGCTGCTAAGCAATTTGACGTTGAATTGGAACATCGTGATCTTGAAATTGATAAGTGC
AAGCATGAACTTGGAGTACTCTCAGAGAAGTATTTGCATGATAAGTCTACTCTTGAGGAT
GAGCTTAGAAAGCTCCATGGAGTCATCAAGAATATGGAAGGTGACCTAGAAAAAAATTCA
CAGGAGAAAATGCAGCTCAAGTCTCGGATTAAAGAACTTGAGCAGGCAGCTCACAGCTTA
GAACGTTCAACTTCCGAGATAGTTAAGCTACAAGAAGTAATAAGGAATACACAAGCGGAA
TTAGAAAAGGTTACAGAGGATAAAATTGTGCTCAAAGAACGCGCTAACGAATTTGAGCAA
CTTTTAAGGGCCCTTAAGGTCTCAGGTACAGAGGTTGCAAAGCTACCAGAAACTATCAAG
AACCTGGAAGCTCAGCTAGAAAGAGCCTTAGAAGAGAAATCAATACTTCAAGACCAGATC
AAGCAGCTGGAGCAGGTTATGTCTGAATCTTTGGAGAAACATTCACATGAGCAGTCCTCT
CTTGCTGCTGACCTTTTGAAGTTATCTGAAGCGAACACTTCACTTGGAGGCAAATTATCC
TCTGTGGCGGCAGAGCTTGTGCAAGTTTATGCTGATAAGGAAGAAGAATCTCTTGATAAT
GAGAAGCAAATTTCTGTCCTCAATCAAGATATTGCCGATCTGAGGAGAAAGCTTGAATTG
TTATCATCTGAGAAAGCCGCAGTTGATGATGAGTTGGCCAAACTGCTAGCTGATATTACG
ACTCGTGACGAAAAGACGAAGCGAATGGATGACCACCTAAATCAGCTTCAGTTTGAGCAT
GCCAAGCTGATGGCAGAATTTGACACCGCACACAGGTCCTTGTCAGAGCTGTGTGCACAG
GTTTCTGAGCTGGAAGAAGAGGTAGAGAAGCAGAAGCTTGTAATATCCGAGACTGCAGAG
GGAAAACGAGAGGCTATCAGGCAGCTGTGCTTCTCCATTGAACACTACCGCAGCGGGTAT
CAGCAGCTGAGGCAGCTGTTGCAAGGCCACAGGAGGCCGTTGGTGATGGCAACCTGATAA
AGTGAACAATGCTGGTTTGCCAATGAACTGCACAGTTCTGGGTCTGTTCTGTTTTTAGCC
TTGTTCTTTCACAACATGTGCCGTGCAGCCTGGTATTAAGAATTCTGTGGTATGTGTGTA
GAATGCAATGGGATGGGATATTCATGTCGTTCATTTACACTCCTGTCTTTTGTTCTTGTT
GTCTACTGTTGAATGTTATGATATGCTTGAACCTTCATCTTTT