Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009779_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:80645871:80652759:1 gene:Zm00001d009779 gene_biotype:protein_coding transcript_biotype:protein_coding description:dihydrolipoyl dehydrogenases
Sequence

ATGGGGTCCACAGCGGCCGTCTCCGTCTCCGCCTCGGCGATCGCGTCCCGCGGCTGCGCC
AGATCCGAGGCTGCGCGGCGGCCAGGTGGAATCCGGGTCTGCGGACTCCGGAGCGAGGCC
CTCACGTGTCACTCGCTTCGGATCTCGCAGGCGCCCGCGAGGCTGATGGTGACGAGGCCG
CCGCCGCCGGCGGCGGCGACCAATGGCGCGGCGGCGGGGAGCTGCGGGTTCGACTACGAT
CTCGTCATCATCGGCGCGGGCGTCGGGGGTCACGGCGCCGCGCTGCACGCCGTTGAAGAG
GGCTTAAAAACAGCAATAATTGAGGGAGATGTTGTGGGTGGGACTTGTGTAAACAGAGGC
TGTGTCCCATCGAAAGCGCTTCTTGCTGTCAGCGGTCGAATGCGGGAGCTTCATGATGAA
CATCATATGAAGTCTTTGGGTCTACAGGTTTCCTCTCCTGGATATGACAGACAAGCTGTT
GCTGATCATGCAAACAATCTTGCCTCGAAAATCCGTATCAACTTGACTAACTCAATGAAA
GCTCTAGGAGTGGATATATTGACAGGTGTTGGCACTATTGTGGGAAAGCAAAAGGTACGA
TATGGAAAAGCTGGTTTCCCAGATAAAGAAATCACTGCCAGGAACATCATAATCGCCACT
GGTTCAGTTCCTTTTGTTCCGAAAGGGATTGAGATTGATGGGAAAACTGTATTTACTAGT
GATCATGCACTGAAACTTGAGTCAGTTCCAGACTGGATAGCTATTGTTGGAAGTGGTTAC
ATTGGACTTGAGTTCAGTGATGTATACACAGCTCTTGGAAGTGAGGTTACTTTTGTTGAA
GCTCTTGACCAGCTGATGCCTGGATTTGATCCTGAAATTGCAAAATTAGCCCAGAGAGTT
CTTATCAATCCTCGGAAAATTGACTATCACACTGGTGTTTTTGCAAGCAAGATTACTCCT
GCAAAGGATGGAAAACCTGTGCTCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAA
GAAACCCTTGAGGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGG
CTTGGCTTGGAAAACATCAATGTTGTTACACAACGTGGTTTTGTGCCTGTTGATGAACGG
ATGCGAGTCATGGATGCAGGTGGCAATGTGGTACCCAATTTATATTGCATTGGAGATGCC
AATGGCAAGCTCATGCTTGCCCATGCTGCCAGTGCACAAGGAATTTCAGTTGTTGAACAA
ATCTCTGGAAAGGATCACATCCTAAATCATTTAAGCATCCCAGCAGCATGTTTCACCCAT
CCAGAGATTAGTATGGTTGGATTGACAGAGCCACAAGCCAGAGAGAAGGCAGATAAAGAA
GGATTTGAGGTAAATGTTGTGAAGACTAGCTTTAAGGCTAACACTAAAGCTTTGGCAGAA
AATGAAGGAGATGGGATTGCTAAGTTGATTTACCGACCTGACACGGGTGAAATTCTTGGG
GTTCACATTTTGGGTTTGCATGCTGCTGATCTCATTCACGAGGCATCAAATGCCATCGCC
CTAGGAACTCGTGTGCAAGACATCAAGTTTGCTGTTCACGCACACCCTACATTGTCTGAG
GTCCTGGATGAACTCTTCAAAGCAGCCAAGGTCCTAGAGAAAGGCCGGATAGCAAGCCAA
GGCAGCCACCCCAACCACTCCTGA

Peptide Sequence

PEP ID

Zm00001d009779_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:80645871:80652759:1 gene:Zm00001d009779 transcript:Zm00001d009779_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:dihydrolipoyl dehydrogenases
Sequence

MGSTAAVSVSASAIASRGCARSEAARRPGGIRVCGLRSEALTCHSLRISQAPARLMVTRP
PPPAAATNGAAAGSCGFDYDLVIIGAGVGGHGAALHAVEEGLKTAIIEGDVVGGTCVNRG
CVPSKALLAVSGRMRELHDEHHMKSLGLQVSSPGYDRQAVADHANNLASKIRINLTNSMK
ALGVDILTGVGTIVGKQKVRYGKAGFPDKEITARNIIIATGSVPFVPKGIEIDGKTVFTS
DHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIAKLAQRV
LINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETLEVDAALIATGRAPFTKG
LGLENINVVTQRGFVPVDERMRVMDAGGNVVPNLYCIGDANGKLMLAHAASAQGISVVEQ
ISGKDHILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEVNVVKTSFKANTKALAE
NEGDGIAKLIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDIKFAVHAHPTLSE
VLDELFKAAKVLEKGRIASQGSHPNHS

Transcript Sequence

Transcript ID

Zm00001d009779_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:80645871:80652759:1 gene:Zm00001d009779 gene_biotype:protein_coding transcript_biotype:protein_coding description:dihydrolipoyl dehydrogenases
Sequence

GCCTCCTCATCGACTTATACGCCTCCTTCTCTTAACTCGACGCACTAGCCTCAGCCAATT
GTCGCATTTCGTCGCTATGGGGTCCACAGCGGCCGTCTCCGTCTCCGCCTCGGCGATCGC
GTCCCGCGGCTGCGCCAGATCCGAGGCTGCGCGGCGGCCAGGTGGAATCCGGGTCTGCGG
ACTCCGGAGCGAGGCCCTCACGTGTCACTCGCTTCGGATCTCGCAGGCGCCCGCGAGGCT
GATGGTGACGAGGCCGCCGCCGCCGGCGGCGGCGACCAATGGCGCGGCGGCGGGGAGCTG
CGGGTTCGACTACGATCTCGTCATCATCGGCGCGGGCGTCGGGGGTCACGGCGCCGCGCT
GCACGCCGTTGAAGAGGGCTTAAAAACAGCAATAATTGAGGGAGATGTTGTGGGTGGGAC
TTGTGTAAACAGAGGCTGTGTCCCATCGAAAGCGCTTCTTGCTGTCAGCGGTCGAATGCG
GGAGCTTCATGATGAACATCATATGAAGTCTTTGGGTCTACAGGTTTCCTCTCCTGGATA
TGACAGACAAGCTGTTGCTGATCATGCAAACAATCTTGCCTCGAAAATCCGTATCAACTT
GACTAACTCAATGAAAGCTCTAGGAGTGGATATATTGACAGGTGTTGGCACTATTGTGGG
AAAGCAAAAGGTACGATATGGAAAAGCTGGTTTCCCAGATAAAGAAATCACTGCCAGGAA
CATCATAATCGCCACTGGTTCAGTTCCTTTTGTTCCGAAAGGGATTGAGATTGATGGGAA
AACTGTATTTACTAGTGATCATGCACTGAAACTTGAGTCAGTTCCAGACTGGATAGCTAT
TGTTGGAAGTGGTTACATTGGACTTGAGTTCAGTGATGTATACACAGCTCTTGGAAGTGA
GGTTACTTTTGTTGAAGCTCTTGACCAGCTGATGCCTGGATTTGATCCTGAAATTGCAAA
ATTAGCCCAGAGAGTTCTTATCAATCCTCGGAAAATTGACTATCACACTGGTGTTTTTGC
AAGCAAGATTACTCCTGCAAAGGATGGAAAACCTGTGCTCATCGAGCTTATTGATGCAAA
GACAAAGGAGCACAAAGAAACCCTTGAGGTTGACGCAGCCCTTATAGCTACAGGAAGGGC
GCCATTCACCAAAGGGCTTGGCTTGGAAAACATCAATGTTGTTACACAACGTGGTTTTGT
GCCTGTTGATGAACGGATGCGAGTCATGGATGCAGGTGGCAATGTGGTACCCAATTTATA
TTGCATTGGAGATGCCAATGGCAAGCTCATGCTTGCCCATGCTGCCAGTGCACAAGGAAT
TTCAGTTGTTGAACAAATCTCTGGAAAGGATCACATCCTAAATCATTTAAGCATCCCAGC
AGCATGTTTCACCCATCCAGAGATTAGTATGGTTGGATTGACAGAGCCACAAGCCAGAGA
GAAGGCAGATAAAGAAGGATTTGAGGTAAATGTTGTGAAGACTAGCTTTAAGGCTAACAC
TAAAGCTTTGGCAGAAAATGAAGGAGATGGGATTGCTAAGTTGATTTACCGACCTGACAC
GGGTGAAATTCTTGGGGTTCACATTTTGGGTTTGCATGCTGCTGATCTCATTCACGAGGC
ATCAAATGCCATCGCCCTAGGAACTCGTGTGCAAGACATCAAGTTTGCTGTTCACGCACA
CCCTACATTGTCTGAGGTCCTGGATGAACTCTTCAAAGCAGCCAAGGTCCTAGAGAAAGG
CCGGATAGCAAGCCAAGGCAGCCACCCCAACCACTCCTGAAGGTCCTCAGCTTCGTCACG
ACCCTGTTTTCTTCCCCAAAACGAGATTGACAACGGTAACGGGGAGGGTGTTGTTGTAGG
CAGTTGCTGTAGGTTACAAATTTGAGGAAGAAATTCATCAGTGAATACAAGCACACAAAT
GTTTCTTTTTTTGGTCCAGATTGTTAAAAGGGTCTTTTTTTTTGACGGTGGGGTGGGTTT
TTGTTGGCTTCGTTATTTGCATATTTGTTGTTGGTTGCCCTGTAAGATGAAGTGCCGAGG
CTAGCTCAGCTAGTTTGAAATAATTCATGTTTCAAAACT