Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009759_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:80072189:80073832:-1 gene:Zm00001d009759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-processing enzyme gamma-isozyme
Sequence

ATGGCGAGTCGTCGCCTCCTCTTTGCCGTGCAGCTCCTCGTACTGATCGCCGCAGTGGCC
GGCACACGGTGGCAGGACTTCCTCCGCCTGCCGTCGGAGTCGGAGTCGGTGGGGACCAGG
TGGGCCGTCCTCATCGCCGGCTCCAATGGCTACTACAACTACCGTCATCAGGCGGACGTG
TGCCACGCGTACCAGGTCTTGAAGAAGGGCGGGCTCAAGGACGAGAACATCGTCGTCTTC
ATGTACGACGACATCGCCGACAGCCCCGACAACCCCAGGCCGGGCGTCATCATCAACCAC
CCATCCGGCGGAGACGTGTACGCGGGGGTCCCCAAGGACTACACGGGCAAGGACGTGAAC
GCCAACAACTTCCTCGCCGCCTTGCTGGGCAACAGGTCCGCCGTCACCGGCGGCGGCAGC
GGCAAGGTGGTCGCCAGCGGGCCGGCCGACCACGTCTTCGTCTACTACAGCGACCACGGC
GGGCCTGGGGTGCTCGGGATGCCGTCGTCGGACGACTACCTGTACGCCAAGGACCTGGTG
GACGCTCTCAGGAAGAAGCACGCCGCGGGGGGCTACCGGAGCCTGGTGTTCTACCTGGAG
GCGTGCGAGTCCGGGAGCATCTTCGAGGGGCTCCTGCCGCCCGACATCGCCGTGTACGCC
ACCACGGCGGCGAACGCGGAGGAGAGCAGCTGGGGCACCTACTGCCCCGGCGACGACCCG
GGCCCGCCGCCCGAGTTCGACACCTGCCTCGGGGACCTCTACAGCGTCGCGTGGATGGAG
GACAGCGACGCGCGCCGCGACCGCCGCGCCGAGACGCTGAGGCAGCAGTACCTGGCGGTG
AAGGACCGGACGTCGGCGCACGGCACCTACAGCCTCGGCTCCCACGCCATGGAGTACGGC
GACGTGCAGGGCCTCGGCGCGCAGAGCCTGTACACGTTCATGGGCAGCGACGACGCCACC
GCCGCGAGCTTATCCGGCCGTGGCCGTGGGCAGCCAGCCGTGAGCCAGCGCGACGCTGAC
CTCGTCTACTTCTGGCGGAGGTACCGCAGGGCGGCGGAGAGGACGCCCGAGAAGGCCGAG
GCCCGGACGCGGCTGCTGCGGGCGGTGTCCCGCCGGTCCCGCGTCGACAGCATCATGGAG
CTCATCGGAGGCCTCCTGTTCGGCTCGGAGGGAGGTCCCAGGGTGCTCGGTGCCGTGCGG
CCGGCGGGACAGCCCCTGGCCGACGACTGGGACTGCCTCAAGTCCTTGGTGCGTGCGTAC
GAGCGCAGCTGCGGGCCGCTCGGGCAGTACGGGATGAAGCACATGCGTGGCTTCGCCAAC
ATCTGCAATGCCGGCGTCGGGGAGGACGGCATGGCCAAGGTGGCGTCCGAGGCCTGCGCC
GCCGTCGCCCGTTCTGACGACTGA

Peptide Sequence

PEP ID

Zm00001d009759_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:80072189:80073832:-1 gene:Zm00001d009759 transcript:Zm00001d009759_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-processing enzyme gamma-isozyme
Sequence

MASRRLLFAVQLLVLIAAVAGTRWQDFLRLPSESESVGTRWAVLIAGSNGYYNYRHQADV
CHAYQVLKKGGLKDENIVVFMYDDIADSPDNPRPGVIINHPSGGDVYAGVPKDYTGKDVN
ANNFLAALLGNRSAVTGGGSGKVVASGPADHVFVYYSDHGGPGVLGMPSSDDYLYAKDLV
DALRKKHAAGGYRSLVFYLEACESGSIFEGLLPPDIAVYATTAANAEESSWGTYCPGDDP
GPPPEFDTCLGDLYSVAWMEDSDARRDRRAETLRQQYLAVKDRTSAHGTYSLGSHAMEYG
DVQGLGAQSLYTFMGSDDATAASLSGRGRGQPAVSQRDADLVYFWRRYRRAAERTPEKAE
ARTRLLRAVSRRSRVDSIMELIGGLLFGSEGGPRVLGAVRPAGQPLADDWDCLKSLVRAY
ERSCGPLGQYGMKHMRGFANICNAGVGEDGMAKVASEACAAVARSDD

Transcript Sequence

Transcript ID

Zm00001d009759_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:80072189:80073832:-1 gene:Zm00001d009759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-processing enzyme gamma-isozyme
Sequence

GTTGTAACTTGGTACCCAGCCATGGCGAGTCGTCGCCTCCTCTTTGCCGTGCAGCTCCTC
GTACTGATCGCCGCAGTGGCCGGCACACGGTGGCAGGACTTCCTCCGCCTGCCGTCGGAG
TCGGAGTCGGTGGGGACCAGGTGGGCCGTCCTCATCGCCGGCTCCAATGGCTACTACAAC
TACCGTCATCAGGCGGACGTGTGCCACGCGTACCAGGTCTTGAAGAAGGGCGGGCTCAAG
GACGAGAACATCGTCGTCTTCATGTACGACGACATCGCCGACAGCCCCGACAACCCCAGG
CCGGGCGTCATCATCAACCACCCATCCGGCGGAGACGTGTACGCGGGGGTCCCCAAGGAC
TACACGGGCAAGGACGTGAACGCCAACAACTTCCTCGCCGCCTTGCTGGGCAACAGGTCC
GCCGTCACCGGCGGCGGCAGCGGCAAGGTGGTCGCCAGCGGGCCGGCCGACCACGTCTTC
GTCTACTACAGCGACCACGGCGGGCCTGGGGTGCTCGGGATGCCGTCGTCGGACGACTAC
CTGTACGCCAAGGACCTGGTGGACGCTCTCAGGAAGAAGCACGCCGCGGGGGGCTACCGG
AGCCTGGTGTTCTACCTGGAGGCGTGCGAGTCCGGGAGCATCTTCGAGGGGCTCCTGCCG
CCCGACATCGCCGTGTACGCCACCACGGCGGCGAACGCGGAGGAGAGCAGCTGGGGCACC
TACTGCCCCGGCGACGACCCGGGCCCGCCGCCCGAGTTCGACACCTGCCTCGGGGACCTC
TACAGCGTCGCGTGGATGGAGGACAGCGACGCGCGCCGCGACCGCCGCGCCGAGACGCTG
AGGCAGCAGTACCTGGCGGTGAAGGACCGGACGTCGGCGCACGGCACCTACAGCCTCGGC
TCCCACGCCATGGAGTACGGCGACGTGCAGGGCCTCGGCGCGCAGAGCCTGTACACGTTC
ATGGGCAGCGACGACGCCACCGCCGCGAGCTTATCCGGCCGTGGCCGTGGGCAGCCAGCC
GTGAGCCAGCGCGACGCTGACCTCGTCTACTTCTGGCGGAGGTACCGCAGGGCGGCGGAG
AGGACGCCCGAGAAGGCCGAGGCCCGGACGCGGCTGCTGCGGGCGGTGTCCCGCCGGTCC
CGCGTCGACAGCATCATGGAGCTCATCGGAGGCCTCCTGTTCGGCTCGGAGGGAGGTCCC
AGGGTGCTCGGTGCCGTGCGGCCGGCGGGACAGCCCCTGGCCGACGACTGGGACTGCCTC
AAGTCCTTGGTGCGTGCGTACGAGCGCAGCTGCGGGCCGCTCGGGCAGTACGGGATGAAG
CACATGCGTGGCTTCGCCAACATCTGCAATGCCGGCGTCGGGGAGGACGGCATGGCCAAG
GTGGCGTCCGAGGCCTGCGCCGCCGTCGCCCGTTCTGACGACTGAACAACCCGTCGCCTT
GTCTTTGTAAAATTGTCTTTGTAAAATTGTTGCTATTTTTTTTGTAAAGAAGAGACTGAA
CTGTAACAGCAAACATCAGGCTAACAAAACAGGTGTCGTGGATAAGATCTC