Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009743_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:79019679:79021421:1 gene:Zm00001d009743 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCCACCACCGCCGCCATCCACCTGCGCCCGCTCCGTTCCGTCGCCGTCTCCTCCGCG AGGTCACGCTCGCTCCTCCACCTCCTCGCCCGGCCCCTCTCCTCTTCCCAATCGTCCTAC GCCTACCGCCCTTCCCCTACAGCGCCCGCCGCCGCCGCCCCCAACCATGTCCACCACCCT CCCCATCACCACCAGTCGGTGCCTCCCCCAGGACCCCCTCCACAGTGGTCCGCGCAGGGA CATCCGCCTCCGCCGCCCCGTGGCTATGGGCCTCCACCGCCGCAGCACCAGCATGTGCCG CCTCCGCCACCACGCGGCTACGGACCTCCACCACCGCCTCCACACGGCCACGTACCTCCG CCGCCTCCGCCGCGACACGGCCACGGGCCTCCACCACCGGGCCAGCACGTACTGCCGCCC CTGCTACCACACGGCCACGGACCTCCGCCACCGGGCCAGCACATGCCACCGCCACACGGC CACGGGCCTCCACCACCGGGCCAGCGCGTACCGCCGCCTCCGCCGCCACACGGCCACGGT CCTCCGCCACCGGGCCAGCACCTACCGCCGCCTCCACCACCACACGGCCACGGTCCTCCA CCCCCGCACCAGCAGGCACCGCCGCCGCCTGATCCTGTGGCGGGGCCTGGGGAGCTGATG GGACTGTGCCGGGAGGGGCGGGTAAAGGATGCCGTGGAGCTTCTCTCCAAGGGTGCGCGC ACCGACCTGGACACCTTCTACGAGCTCGCGGCCACCTGCTCCAACCCTAAGCTGCTGGAG GAGCTCAGGAAGGTGCACGACTTCTTCCTCCGCTCGCCCTTCCGCGGCGACCTCCGGGTC AACAACATGCTGCTCGCGATGTATGCCAAGTGCGCAGCCATGCCACATGCCCGCAGGACG TTTGACAATATGCCTGACCGCGACATGGACTCGTGGCACATCATGATCGACGGCTACTCT GTCAATGGACTTGGGGACGAGGCGCTGCGTCTGTTCGAGCTGATGAAGGAGTGTATGGCA CCCACAAGTCAGACCTACCTGCTTGTGCTCAATGCCTGTGCCAACTCAGAGGCCATCGAG GAGGCGCTCCTTTACTTTGATGCCATGTCCAGGGACCATGGCATTGAGCCTGGTGTGGAG CACTATGTTGGGATCATTGAGGTCTTGGGGAAGTCAGGGCATCTCAACGAGGCTCTGGAG TTCATTGAGAAGCTGCCTTTCGAGCCCAATGCCATGGTGTGGGAGTCACTCTTGAACCTG GCCCGGATGAATGGAGACATTGACCTTGAGGACCGGGCAGAGGAGTTGTTGGTGTCGCTT GATCCATCCAAGGCAAATCCTAAGAAGCTCCCAACCCCACCTCCCAAGAGGCGCCTGGGA ATTAACATGCTTGATGGGAGGAACAAGCTAGTAGAGTACAGGCTGCCACCAAAGATTGAA AAGAAGGTGGTCAATGAGCAGAGGTATGTCCCAGACACAAGATATGTGCTCCATGACATT GACCAGGAGGCCAAGGAACAGGCATTGCTGTACCACAGTGAGAGGCTGGCAATTGCTTAT GGTCTGATTAGCACTCCAGCAAGAACTCCACTTCGTATCATTAAGAACCTGAGGATATGT GGTGACTGCCACAACGCCATCAAGATCATGTCAAGGATCGTTGGGAGAGAGCTTATTGTG AGGGACAACAAGAGGTTCCACCACTTCAAAGATGGAAAGTGCTCCTGTGGAGATTATTGG TGA

Peptide Sequence

PEP ID	Zm00001d009743_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:79019679:79021421:1 gene:Zm00001d009743 transcript:Zm00001d009743_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MATTAAIHLRPLRSVAVSSARSRSLLHLLARPLSSSQSSYAYRPSPTAPAAAAPNHVHHP PHHHQSVPPPGPPPQWSAQGHPPPPPRGYGPPPPQHQHVPPPPPRGYGPPPPPPHGHVPP PPPPRHGHGPPPPGQHVLPPLLPHGHGPPPPGQHMPPPHGHGPPPPGQRVPPPPPPHGHG PPPPGQHLPPPPPPHGHGPPPPHQQAPPPPDPVAGPGELMGLCREGRVKDAVELLSKGAR TDLDTFYELAATCSNPKLLEELRKVHDFFLRSPFRGDLRVNNMLLAMYAKCAAMPHARRT FDNMPDRDMDSWHIMIDGYSVNGLGDEALRLFELMKECMAPTSQTYLLVLNACANSEAIE EALLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNEALEFIEKLPFEPNAMVWESLLNL ARMNGDIDLEDRAEELLVSLDPSKANPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIE KKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRIC GDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW

Transcript Sequence

Transcript ID	Zm00001d009743_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:79019679:79021421:1 gene:Zm00001d009743 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCCACCACCGCCGCCATCCACCTGCGCCCGCTCCGTTCCGTCGCCGTCTCCTCCGCG AGGTCACGCTCGCTCCTCCACCTCCTCGCCCGGCCCCTCTCCTCTTCCCAATCGTCCTAC GCCTACCGCCCTTCCCCTACAGCGCCCGCCGCCGCCGCCCCCAACCATGTCCACCACCCT CCCCATCACCACCAGTCGGTGCCTCCCCCAGGACCCCCTCCACAGTGGTCCGCGCAGGGA CATCCGCCTCCGCCGCCCCGTGGCTATGGGCCTCCACCGCCGCAGCACCAGCATGTGCCG CCTCCGCCACCACGCGGCTACGGACCTCCACCACCGCCTCCACACGGCCACGTACCTCCG CCGCCTCCGCCGCGACACGGCCACGGGCCTCCACCACCGGGCCAGCACGTACTGCCGCCC CTGCTACCACACGGCCACGGACCTCCGCCACCGGGCCAGCACATGCCACCGCCACACGGC CACGGGCCTCCACCACCGGGCCAGCGCGTACCGCCGCCTCCGCCGCCACACGGCCACGGT CCTCCGCCACCGGGCCAGCACCTACCGCCGCCTCCACCACCACACGGCCACGGTCCTCCA CCCCCGCACCAGCAGGCACCGCCGCCGCCTGATCCTGTGGCGGGGCCTGGGGAGCTGATG GGACTGTGCCGGGAGGGGCGGGTAAAGGATGCCGTGGAGCTTCTCTCCAAGGGTGCGCGC ACCGACCTGGACACCTTCTACGAGCTCGCGGCCACCTGCTCCAACCCTAAGCTGCTGGAG GAGCTCAGGAAGGTGCACGACTTCTTCCTCCGCTCGCCCTTCCGCGGCGACCTCCGGGTC AACAACATGCTGCTCGCGATGTATGCCAAGTGCGCAGCCATGCCACATGCCCGCAGGACG TTTGACAATATGCCTGACCGCGACATGGACTCGTGGCACATCATGATCGACGGCTACTCT GTCAATGGACTTGGGGACGAGGCGCTGCGTCTGTTCGAGCTGATGAAGGAGTGTATGGCA CCCACAAGTCAGACCTACCTGCTTGTGCTCAATGCCTGTGCCAACTCAGAGGCCATCGAG GAGGCGCTCCTTTACTTTGATGCCATGTCCAGGGACCATGGCATTGAGCCTGGTGTGGAG CACTATGTTGGGATCATTGAGGTCTTGGGGAAGTCAGGGCATCTCAACGAGGCTCTGGAG TTCATTGAGAAGCTGCCTTTCGAGCCCAATGCCATGGTGTGGGAGTCACTCTTGAACCTG GCCCGGATGAATGGAGACATTGACCTTGAGGACCGGGCAGAGGAGTTGTTGGTGTCGCTT GATCCATCCAAGGCAAATCCTAAGAAGCTCCCAACCCCACCTCCCAAGAGGCGCCTGGGA ATTAACATGCTTGATGGGAGGAACAAGCTAGTAGAGTACAGGCTGCCACCAAAGATTGAA AAGAAGGTGGTCAATGAGCAGAGGTATGTCCCAGACACAAGATATGTGCTCCATGACATT GACCAGGAGGCCAAGGAACAGGCATTGCTGTACCACAGTGAGAGGCTGGCAATTGCTTAT GGTCTGATTAGCACTCCAGCAAGAACTCCACTTCGTATCATTAAGAACCTGAGGATATGT GGTGACTGCCACAACGCCATCAAGATCATGTCAAGGATCGTTGGGAGAGAGCTTATTGTG AGGGACAACAAGAGGTTCCACCACTTCAAAGATGGAAAGTGCTCCTGTGGAGATTATTGG TGA