Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009708_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:77013599:77017336:-1 gene:Zm00001d009708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

ATGGGCGGCCGCGCCTCCCGCCACCGCGCGCAGCCGCACGACCAGTCTTCTCACCCTCCT
CCTCGGCCGCCGCCCAAGCAGCAGCAGGGCCAGCAGCACCCCAACAACCGCCCCAACAAG
CCCAAGCAGCAGCAGCAGCCCCCACCTCCACGTCCTCCGCCGCCACACCAGGCTCCCCCC
GCCGCCTCCCCCGCCGCCCCGGGCGCGGCCACCGTCGGCCGCGTGCTGGGCCGGCCGATG
GAGGACGTGCGCGCGTCCTACACGTTCGGCCGGGAGCTGGGCCGGGGCCAGTTCGGCGTC
ACCTACCTGGCCACGCACAAGCCCACCGGCCGCCGGTACGCGTGCAAGTCCATCGCGACG
CGGAAGCTCGCGCACAGCGACGACGTCGACGACGTCCGCCGGGAGGTGCAGATCATGCAC
CACCTCACGGGCCACCGCAGCATCGTCGAGCTCCGGGGCGCCTACGAGGACCGCCACTCC
GTCAACCTCGTCATGGAGCTGTGCGAGGGTGGGGAGCTCTTCGACCGCATCATCGCGAGG
GGGCACTACTCCGAGCGTGCCGCCGCCGCCCTCTGCAGGGAGATCGTCTCCGTCGTCCAC
AGCTGCCACTCCATGGGGGTCATGCATCGGGACCTCAAGCCCGAAAACTTCCTCTTCCTT
AACAAGAGGGAGGACTCGCCGCTCAAGGCCACGGATTTCGGACTCTCCGTCTTCTTCAAG
CCCGAGGAAGAGATCGTGGGCTTGAAGGAAATGTTCAAATCCCTGGATACTGACAACAGT
GGGACAATAACGCTGGAAGAATTGAGAGCTGGTTTACCAAAGCTCGGCACCAAAATCTCT
GAATCAGAAATAAGGCAGTTGATGGAAGCAGCTGATGTTGATGGGAATGGCACCATTGAT
TATGTTGAATTTATATCAGCAACAATGCACATGAATAGACTAGAGAAGGAGGATCATATA
TTTAAAGCATTCGAGTATTTTGACAAGGATCATAGCGGGCACATTACAGTTGATGAGTTG
GAAGAAGCTTTGAAGAAGTATGATATGGGCGATGAGGCAACAGTTAAAGAAATTATTGCT
GAAGTAGACACAGATCACGATGGGAGAATCAACTACCAGGAGTTTGTTGCCATGATGAAG
AATAATAGCCCCGAGATTGTTCCAAATCGGAGGCGCATGTTTTAA

Peptide Sequence

PEP ID

Zm00001d009708_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:77013599:77017336:-1 gene:Zm00001d009708 transcript:Zm00001d009708_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

MGGRASRHRAQPHDQSSHPPPRPPPKQQQGQQHPNNRPNKPKQQQQPPPPRPPPPHQAPP
AASPAAPGAATVGRVLGRPMEDVRASYTFGRELGRGQFGVTYLATHKPTGRRYACKSIAT
RKLAHSDDVDDVRREVQIMHHLTGHRSIVELRGAYEDRHSVNLVMELCEGGELFDRIIAR
GHYSERAAAALCREIVSVVHSCHSMGVMHRDLKPENFLFLNKREDSPLKATDFGLSVFFK
PEEEIVGLKEMFKSLDTDNSGTITLEELRAGLPKLGTKISESEIRQLMEAADVDGNGTID
YVEFISATMHMNRLEKEDHIFKAFEYFDKDHSGHITVDELEEALKKYDMGDEATVKEIIA
EVDTDHDGRINYQEFVAMMKNNSPEIVPNRRRMF

Transcript Sequence

Transcript ID

Zm00001d009708_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:77013599:77017336:-1 gene:Zm00001d009708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

GGAGAGGGACGGAGACCAGTCGCCCGCCGACCCGTGCGTCTCCACTCGTCCACGCGCAAA
TCCCCTTCCCACCCCCTGACCAGACCAAAGGCAGTAGCAACTAGCAATGCAGCTTCCTCC
TCGTCTTCCTCCTCCACCTCAGCTGCTCATGCTCCTCCCAGTCCCCTCCTCCTGCCCCCA
ATCCTCTTCCGCCCCTCCCTCGGGCCTCTTCCCCATCTCCTGATCACACTCGCTCGCGCG
CCATGGGCGGCCGCGCCTCCCGCCACCGCGCGCAGCCGCACGACCAGTCTTCTCACCCTC
CTCCTCGGCCGCCGCCCAAGCAGCAGCAGGGCCAGCAGCACCCCAACAACCGCCCCAACA
AGCCCAAGCAGCAGCAGCAGCCCCCACCTCCACGTCCTCCGCCGCCACACCAGGCTCCCC
CCGCCGCCTCCCCCGCCGCCCCGGGCGCGGCCACCGTCGGCCGCGTGCTGGGCCGGCCGA
TGGAGGACGTGCGCGCGTCCTACACGTTCGGCCGGGAGCTGGGCCGGGGCCAGTTCGGCG
TCACCTACCTGGCCACGCACAAGCCCACCGGCCGCCGGTACGCGTGCAAGTCCATCGCGA
CGCGGAAGCTCGCGCACAGCGACGACGTCGACGACGTCCGCCGGGAGGTGCAGATCATGC
ACCACCTCACGGGCCACCGCAGCATCGTCGAGCTCCGGGGCGCCTACGAGGACCGCCACT
CCGTCAACCTCGTCATGGAGCTGTGCGAGGGTGGGGAGCTCTTCGACCGCATCATCGCGA
GGGGGCACTACTCCGAGCGTGCCGCCGCCGCCCTCTGCAGGGAGATCGTCTCCGTCGTCC
ACAGCTGCCACTCCATGGGGGTCATGCATCGGGACCTCAAGCCCGAAAACTTCCTCTTCC
TTAACAAGAGGGAGGACTCGCCGCTCAAGGCCACGGATTTCGGACTCTCCGTCTTCTTCA
AGCCCGAGGAAGAGATCGTGGGCTTGAAGGAAATGTTCAAATCCCTGGATACTGACAACA
GTGGGACAATAACGCTGGAAGAATTGAGAGCTGGTTTACCAAAGCTCGGCACCAAAATCT
CTGAATCAGAAATAAGGCAGTTGATGGAAGCAGCTGATGTTGATGGGAATGGCACCATTG
ATTATGTTGAATTTATATCAGCAACAATGCACATGAATAGACTAGAGAAGGAGGATCATA
TATTTAAAGCATTCGAGTATTTTGACAAGGATCATAGCGGGCACATTACAGTTGATGAGT
TGGAAGAAGCTTTGAAGAAGTATGATATGGGCGATGAGGCAACAGTTAAAGAAATTATTG
CTGAAGTAGACACAGATCACGATGGGAGAATCAACTACCAGGAGTTTGTTGCCATGATGA
AGAATAATAGCCCCGAGATTGTTCCAAATCGGAGGCGCATGTTTTAAGGCTCATCTCCTA
CATTTAATTGGAAAAAAGAAAGACTTCTAAGATATATTTTTCCGCGGTCAGAGGGGAGAG
CAACTGATACTCGAAAGTGGGATTCAGCCTGGGCATATGTGCAATGATATTACAGACTTT
GGACAAGTCATCAGTCATGGGTGATTGCCTTTGTGTTGCTTCCATTTTCGACCATCTCAT
CCTACGATCTTTCCAAGTTATCTTTAATGAGGTGTGTCGTGTGGTCTATGTTTCCTGCCT
CTGGATCTTTTATGTAAGAGAAACGGACTTGTAAAACAGTTCCAAATTATCATATACCAG
GCGAAAAGTAATGCGATGTGCCTTGTGAT