Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009667_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:75122095:75124917:-1 gene:Zm00001d009667 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	ATGACACAAGTGAAGCTACTCTCGTCTCGTGTCTCGTTGCCGTTATTTAAACACCCCTTA TCTTTCCCTCCTCAGGCTCAAAAGCCTTGCCCTTCCCTGTTCTGCTCCTCCTCGTTCTCT GTGATGCTGAGGCTAAAAGCTCTCACCTTCCTGCTCCTGCTCCTCCTCCTCGCTCTCTGC TCCGGCGTTCATCTGTGCGACGCGAGGAGCGGCACGCGCTGGAGTCGGACGACGCGAGGC GGTGGTAGCGGGGCGGCACCGTCCGCCTCCGCTGCTGCGATCGGGAGGAAAGGGAAAGCG AGAAGCAGCGGCTCCTCCCACAGGCAAAGCGGCGAAGGGAGTCGGAGCCCGACCGACGGC GACCCCGTGCAGGGCGACGGAAGCCAGGCTCCACCACCACAGGATACTACGGTCTTCAGC GTGGTGGAGTTCGGAGCCAAGGGTGACGGCGTTACAGATGACACTCAGGCCTTTGAAGCA GCGTGGGCAGCAGCGTGCAAGGTGGAGGCGTCTACGGTTCTTGTACCATCTGGGCTCGAG TTTGTCGTGGGCCCGATCTCGTTCTCTGGGCCTTACTGTAAACCGAACATCCTGTTCCAG TGGCTGGAGTTCACGAAGCTAACCGGAATCGCGGTCCAAGGCAGCGGTGTGATAAACGGC AGGGGCCAGGACTGGTGGACGTATGCAGACCCAAACGATGCCGACGACGAGTCTGTGGAG ATGCTGCTGCCACGGACTAAGCCCACGGCGCTGAGGTTCTATGGCAGCTCCAATGTCACG GTAGCTGGGATCACGATCGTGAACAGCTCCCAGTGCCACCTCAAGTTCGACAGCTGCGAG GGCGTCATGGTCCACGACCTGAGCGTCTCGTCCCCCGAGGACAGTCCCAACACCGACGGG ATACACCTGCAGAACTCCAGGGGAGTCGACATCCACCACGCGACACTGGCCTGCGGCGAT GACTGCATCTCCATACAGACGGGGTGCAGCGACGTGAACATACACAGCGTGAACTGTGGG CCAGGGCACGGGATCAGCATCGGTGGTCTAGGGAGGTTCAACACGAAGGCGTGCGTGTCC AACGTCACCGTACGAGATGTCAAGATGTTCAGGACAACGACGGGTGTCAGAATCAAGACA TGGCAGGGCGGGTCGGGGCTGGTGCAGGGCGTGAGGTTCTCGAACATCCAGGTCACGGAG GTGCAGACGCCCATCATGATAGACCAGTTCTACTGCGACAGGGCGACGTGCAGGAACCAG ACGTCGGCGGTGGCCGTCTCGGGCGTCCAGTACGAGGACGTCAGGGGCACCTTCACCGTC AGGCCCGCGCACCTGGCGTGCAGCGACAGCTCGCCCTGCTCGGGGATCACCCTCGCCGGG ATACAGCTCCAGCCCCTGCCGCTGCCGCAGCACCGCCGCCTGTCGTACGACCCCTTCTGC TGGCAGGCGTTCGGGGAGCTGTACACCCCCACCGTGCCCCCCATACCTTGCTTGCAGATC GGCAGGCCGGCAGCAGGGAACAGCGTGCTGTCCGACGGCGACCTTTGCTGA

Peptide Sequence

PEP ID	Zm00001d009667_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:75122095:75124917:-1 gene:Zm00001d009667 transcript:Zm00001d009667_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	MTQVKLLSSRVSLPLFKHPLSFPPQAQKPCPSLFCSSSFSVMLRLKALTFLLLLLLLALC SGVHLCDARSGTRWSRTTRGGGSGAAPSASAAAIGRKGKARSSGSSHRQSGEGSRSPTDG DPVQGDGSQAPPPQDTTVFSVVEFGAKGDGVTDDTQAFEAAWAAACKVEASTVLVPSGLE FVVGPISFSGPYCKPNILFQWLEFTKLTGIAVQGSGVINGRGQDWWTYADPNDADDESVE MLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPEDSPNTDG IHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFNTKACVS NVTVRDVKMFRTTTGVRIKTWQGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCDRATCRNQ TSAVAVSGVQYEDVRGTFTVRPAHLACSDSSPCSGITLAGIQLQPLPLPQHRRLSYDPFC WQAFGELYTPTVPPIPCLQIGRPAAGNSVLSDGDLC

Transcript Sequence

Transcript ID	Zm00001d009667_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:75122095:75124917:-1 gene:Zm00001d009667 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	AGTGGGGAGCGACGAAAGCCATGACACAAGTGAAGCTACTCTCGTCTCGTGTCTCGTTGC CGTTATTTAAACACCCCTTATCTTTCCCTCCTCAGGCTCAAAAGCCTTGCCCTTCCCTGT TCTGCTCCTCCTCGTTCTCTGTGATGCTGAGGCTAAAAGCTCTCACCTTCCTGCTCCTGC TCCTCCTCCTCGCTCTCTGCTCCGGCGTTCATCTGTGCGACGCGAGGAGCGGCACGCGCT GGAGTCGGACGACGCGAGGCGGTGGTAGCGGGGCGGCACCGTCCGCCTCCGCTGCTGCGA TCGGGAGGAAAGGGAAAGCGAGAAGCAGCGGCTCCTCCCACAGGCAAAGCGGCGAAGGGA GTCGGAGCCCGACCGACGGCGACCCCGTGCAGGGCGACGGAAGCCAGGCTCCACCACCAC AGGATACTACGGTCTTCAGCGTGGTGGAGTTCGGAGCCAAGGGTGACGGCGTTACAGATG ACACTCAGGCCTTTGAAGCAGCGTGGGCAGCAGCGTGCAAGGTGGAGGCGTCTACGGTTC TTGTACCATCTGGGCTCGAGTTTGTCGTGGGCCCGATCTCGTTCTCTGGGCCTTACTGTA AACCGAACATCCTGTTCCAGTGGCTGGAGTTCACGAAGCTAACCGGAATCGCGGTCCAAG GCAGCGGTGTGATAAACGGCAGGGGCCAGGACTGGTGGACGTATGCAGACCCAAACGATG CCGACGACGAGTCTGTGGAGATGCTGCTGCCACGGACTAAGCCCACGGCGCTGAGGTTCT ATGGCAGCTCCAATGTCACGGTAGCTGGGATCACGATCGTGAACAGCTCCCAGTGCCACC TCAAGTTCGACAGCTGCGAGGGCGTCATGGTCCACGACCTGAGCGTCTCGTCCCCCGAGG ACAGTCCCAACACCGACGGGATACACCTGCAGAACTCCAGGGGAGTCGACATCCACCACG CGACACTGGCCTGCGGCGATGACTGCATCTCCATACAGACGGGGTGCAGCGACGTGAACA TACACAGCGTGAACTGTGGGCCAGGGCACGGGATCAGCATCGGTGGTCTAGGGAGGTTCA ACACGAAGGCGTGCGTGTCCAACGTCACCGTACGAGATGTCAAGATGTTCAGGACAACGA CGGGTGTCAGAATCAAGACATGGCAGGGCGGGTCGGGGCTGGTGCAGGGCGTGAGGTTCT CGAACATCCAGGTCACGGAGGTGCAGACGCCCATCATGATAGACCAGTTCTACTGCGACA GGGCGACGTGCAGGAACCAGACGTCGGCGGTGGCCGTCTCGGGCGTCCAGTACGAGGACG TCAGGGGCACCTTCACCGTCAGGCCCGCGCACCTGGCGTGCAGCGACAGCTCGCCCTGCT CGGGGATCACCCTCGCCGGGATACAGCTCCAGCCCCTGCCGCTGCCGCAGCACCGCCGCC TGTCGTACGACCCCTTCTGCTGGCAGGCGTTCGGGGAGCTGTACACCCCCACCGTGCCCC CCATACCTTGCTTGCAGATCGGCAGGCCGGCAGCAGGGAACAGCGTGCTGTCCGACGGCG ACCTTTGCTGAAACGCCGATCGGTTCATCAGTTAAGCTAAGGCGGTCGTCGTGATGCTTC CGACCCCTGCTTTGCACGATGTGGATTGTGGAGTGTCAGTTGATGATGCATCATGCATGC ATGCGTACGTGGGATACTTGAGGCCGATTTATTATATTGATGCGAGCCGATCACCACTAT TGCTATGTACACGAGGTCACTTGTCACGCACGCTCCAGTCGTTGTCCAGCATCA