Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009646_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:74205128:74206555:1 gene:Zm00001d009646 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:scarecrow-like1 description: scarecrow-like1
Sequence	ATGGACCCCTTCACAGCCATGGCGCTCAGCGGTACCCTCTCACCCTCATTCTCTACCACA TCTACCAATGATACCATGTACAACCTTAACCCAGCGTTGTATGCATCCCTCGTGCCACCA ATAAGGAAACCTGCAACCCCGACCACACTAGAGGTAGGGAGGCAATGCAAGGAGGAGGAG GATGCATCCATTCGTCTGGTGCACCTGCTTATCACTTGCACCAGTGCCATTGAGACTGGT GACTACTCGATCGCACAAGGAAACTTGTCTGAGGCACGCAAGATTCTTGGGGAAATCCCA ACTTCGACCGGGATTGGCCGTGTTGGGAAACACTTCATCGACGCACTAGTTCAACGCCTC TTCCCGGCATATCCGCACGCAGCACCACCTTCTCCATCTCCTTCTACATCGATCGATCTG CACAACAATTTTTATGATGCAGGTCCCTACCTAAAGTTCGCCTACTCCACTGCCAACCAA GCAATCCTCAAAGCAATCAAAGGATACAACCATGTACACATAATTGACTTTTCCCTGATG CAAGGTCTCCAGTGGCCGGCACTCATGGATGTCTTCTCCGCCCGTGAGGGTGGGCCACCA AAGCTCCGAATCACAGGCATTGGCCCGAACCCAATAGGTGGCCGTGACGAGCTCCATGAA GTGGGAATTCGCCTCGCCAAGTATGCACACTCGGTGGGTATCGACTTCACTTTCCAGGGA GTCTGTGTCGATCAGCTTGATAGGTTGTGCGATTGGATGCTTCTCAAACCAATCAAAGGA GAGGCAGTTGCCATAAACTCCATCCTACAGCTCCATCGCCTCCTCGTTGACCCAGATGCA AACCCAGTGGTGCCCGCACCAATAGATATCCTCCTCAAATTGGTCATCAAGATAAACCCC ATGATCTTCACGGTGGTTGAGCATGAGGCAGATCACAACAGACCACCACTACTAGAGAGG TTCACTAATGCCCTCTTCCACTATGCGACCATGTTTGACTCTTTGGAGGCCATGCATCGT TGTACCAGTGGTAGAGACATCACCGACTCACTCACAGAGGTGTACCTTCGAGGTGAGATT TTTGACATTGTCTGCGGCGAGGGCAGTGCACGCACCGAACGTCATGAGTTGTTTGGTCAC TGGAGGGAGAGGCTCACCTATGCTGGGCTAACTCAAGTGTGGTTCGACCCCGATGAGGTT GACACGCTAAAAGACCAGTTGATCCATGTGACATCCTTATCTGGCTCTGGGTTCAACATC CTAGTGTGTGATGGCAGCCTTGCACTAGCGTGGCATAATCGCCCGTTATATGTGGCAACA GCTTGGTGTGTGACAGGAGGAAATGCTGCCAGTTCCATGGTTGGCAACATCTGTAAGGGT ACAAATGATAGTAGAAGAAAGGAAAACCGTAATGGACCCATGGAGTAG

Peptide Sequence

PEP ID	Zm00001d009646_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:74205128:74206555:1 gene:Zm00001d009646 transcript:Zm00001d009646_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:scarecrow-like1 description: scarecrow-like1
Sequence	MDPFTAMALSGTLSPSFSTTSTNDTMYNLNPALYASLVPPIRKPATPTTLEVGRQCKEEE DASIRLVHLLITCTSAIETGDYSIAQGNLSEARKILGEIPTSTGIGRVGKHFIDALVQRL FPAYPHAAPPSPSPSTSIDLHNNFYDAGPYLKFAYSTANQAILKAIKGYNHVHIIDFSLM QGLQWPALMDVFSAREGGPPKLRITGIGPNPIGGRDELHEVGIRLAKYAHSVGIDFTFQG VCVDQLDRLCDWMLLKPIKGEAVAINSILQLHRLLVDPDANPVVPAPIDILLKLVIKINP MIFTVVEHEADHNRPPLLERFTNALFHYATMFDSLEAMHRCTSGRDITDSLTEVYLRGEI FDIVCGEGSARTERHELFGHWRERLTYAGLTQVWFDPDEVDTLKDQLIHVTSLSGSGFNI LVCDGSLALAWHNRPLYVATAWCVTGGNAASSMVGNICKGTNDSRRKENRNGPME

Transcript Sequence

Transcript ID	Zm00001d009646_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:74205128:74206555:1 gene:Zm00001d009646 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:scarecrow-like1 description: scarecrow-like1
Sequence	ATGGACCCCTTCACAGCCATGGCGCTCAGCGGTACCCTCTCACCCTCATTCTCTACCACA TCTACCAATGATACCATGTACAACCTTAACCCAGCGTTGTATGCATCCCTCGTGCCACCA ATAAGGAAACCTGCAACCCCGACCACACTAGAGGTAGGGAGGCAATGCAAGGAGGAGGAG GATGCATCCATTCGTCTGGTGCACCTGCTTATCACTTGCACCAGTGCCATTGAGACTGGT GACTACTCGATCGCACAAGGAAACTTGTCTGAGGCACGCAAGATTCTTGGGGAAATCCCA ACTTCGACCGGGATTGGCCGTGTTGGGAAACACTTCATCGACGCACTAGTTCAACGCCTC TTCCCGGCATATCCGCACGCAGCACCACCTTCTCCATCTCCTTCTACATCGATCGATCTG CACAACAATTTTTATGATGCAGGTCCCTACCTAAAGTTCGCCTACTCCACTGCCAACCAA GCAATCCTCAAAGCAATCAAAGGATACAACCATGTACACATAATTGACTTTTCCCTGATG CAAGGTCTCCAGTGGCCGGCACTCATGGATGTCTTCTCCGCCCGTGAGGGTGGGCCACCA AAGCTCCGAATCACAGGCATTGGCCCGAACCCAATAGGTGGCCGTGACGAGCTCCATGAA GTGGGAATTCGCCTCGCCAAGTATGCACACTCGGTGGGTATCGACTTCACTTTCCAGGGA GTCTGTGTCGATCAGCTTGATAGGTTGTGCGATTGGATGCTTCTCAAACCAATCAAAGGA GAGGCAGTTGCCATAAACTCCATCCTACAGCTCCATCGCCTCCTCGTTGACCCAGATGCA AACCCAGTGGTGCCCGCACCAATAGATATCCTCCTCAAATTGGTCATCAAGATAAACCCC ATGATCTTCACGGTGGTTGAGCATGAGGCAGATCACAACAGACCACCACTACTAGAGAGG TTCACTAATGCCCTCTTCCACTATGCGACCATGTTTGACTCTTTGGAGGCCATGCATCGT TGTACCAGTGGTAGAGACATCACCGACTCACTCACAGAGGTGTACCTTCGAGGTGAGATT TTTGACATTGTCTGCGGCGAGGGCAGTGCACGCACCGAACGTCATGAGTTGTTTGGTCAC TGGAGGGAGAGGCTCACCTATGCTGGGCTAACTCAAGTGTGGTTCGACCCCGATGAGGTT GACACGCTAAAAGACCAGTTGATCCATGTGACATCCTTATCTGGCTCTGGGTTCAACATC CTAGTGTGTGATGGCAGCCTTGCACTAGCGTGGCATAATCGCCCGTTATATGTGGCAACA GCTTGGTGTGTGACAGGAGGAAATGCTGCCAGTTCCATGGTTGGCAACATCTGTAAGGGT ACAAATGATAGTAGAAGAAAGGAAAACCGTAATGGACCCATGGAGTAG