Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009617_T039
CDS Infomation

cds chromosome:B73_RefGen_v4:8:73346200:73351507:-1 gene:Zm00001d009617 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

ATGGAAGGGGCGGCGGCGGCGGAGGTGGGCGGCGGCGGCGAGGATGTGCAGATCAAGGGC
GCCAAGGAGAGTGGGCAGCCCGCGGCGGCGGCGCAGCAGCCGCCGCCGCTGCCGTCCGGC
AGCGAGGCGCTGGAGATGCCGGCCACGCCGCTTCCGCGGGACATGGACTGGTCCGAGCAC
TTCTCCTTCTTCACCTCGCCGGGCGGGTTCGCGGGCAGCTCGGACGGCGCGAGGGGCCTC
GCCAGCGTCGGCCTGTCCAACTCCGAGTCCAGGCCGGACAGCGTGACGCAGCGCGGCGTG
GACCACGGCGCGGAAGAGAGGGTGGAGGAGCTCACATTGAAGAACTGCATTAGCGCTGAT
GCTGCCCAGCCCGAAGCCTCTGCTGGTGGGAGCACGAGCGGTGGGGATAGGCCTGCTGTT
ATTAAGGGCCTGTGGGGTAACTTCACACGGATGGCCCGGAGAACCAGCTATTTGGCCAGC
AGGGAAAACGCCGCACTGAGCTATGGCGACATTGCAAGCTCGAGGGCTGGTGATGCTTCT
AGCAGGGAAAATCTGGCGACGAGCCTTGCCAACAATATCATCTCAAGGAACAACGATGTG
TCTGGCAATGAGGCACCTACGAGTCGTGTCGGATATGTGAATAATGAGTTCAAGACGCCA
TTTCACAGCCAGCAGATTCTCTTGTCCCCTTGGTCTAATCAGGACAACGCTCTTAAAGTA
AGCAGCTTCTCGAATAGGATTCTTGATCAGATGAGAAGTAAGACTGTGGCACCCCCATCT
GGGGTTCTAGGGTCACCGCTTAAAAGCAAATCAAAAGGTAAAGGGGTTGCATACCAACGT
GCACGGGAGGAGATCCGAGTGCAAGCTAATGCAAGACCCAGAGACCCTCTGGACAAGATC
CCGACAATTCCTACCTCAATTCATGATTCTGTGGCCAGAGTGGACATGCTTTTCAGTACT
AGTGGAGATGTTTCAAAATCCCACTCTGAGGGAACTAGCCTGAGGGAACTGATTAAGCCT
GGGCGGCAAACGATGTCCAAGTTTGAGAAATTGCATTTGTTTAAGCAGATCCTTGATCTT
GTGGATAACTGTCATGCACAGGGTTTTACTTTACAACATTTGCGACCATCATATTTTACG
ATCCTATCTTCAAATCAAGTTAAATATATCGGTTCTTATACCACACAAGATTTGCCAACA
TCAATCAAACAAGAGTTTGCTAGAGAAGATCTTGTGAGTAGAAAAAGAGCTTTTGGCCAT
AGAATTGATTACCAAGACTCTAATGGCCATGGAAATTTGATGCTGAAGCATCAAAAGGTT
GGTGAGCAAGGCTTAGTTGCTGTCAGGCGGCTGGCAAATACATTTTTGACTGACAAAATA
CGCGACAATCAAATTGAAGATAACGATCCAGGTATTTCAAGGCAAGAAAATTTTAGTTAC
ACTACCAGAGAACATTTTAAGTTCGTCGAATCATATGGCAGCAATATGTCCAGTGCTCAG
CATGTATCTAGTTCTGGAACCCAACAACCAGCATTTGAATTGAGGAATATTGAGGAAAGC
TGGTACAAAAGCCCAGAGGAGCTCAGTCAATTTAAAGGCACACCCCCATCAAACATCTAT
AGCCTTGGGGTTCTTCTATTTGAGCTCTTTTGCTGTTCTGAGACATGGGAGATGCACTGT
GCTGCAATGTCAAATCTTCGCCAACGCATCCTTCCTCCAAATTTTCTTTCAGAAAGTCCC
AAGGAGGCTGGCTTCTGCCTTTGGTTACTGCATCCAGATCCTTGTTCAAGACCAAAAGCA
AAAGAGATTCTTGGATGTGACTTGATAAATGAGGGTCGGGATTTGTCCTTGTTAGATAAG
TCACCAGTTTCCATCAGTGAAGATGACACTGAATCTAGTTTGCTACTTAACTTCCTTTCT
CAATTGAAAGAAGAAAAGGAGATGCAGGCTGCCAAGTTATCGGCAGAGCTTGGAAGCTTA
CAAACAGATATCACAGAGATTGACAGAAGACACTCAGCAGGAATGAGATTGAGTTTAGAG
GATATGGATGTACTGCCAAGTTCTAGTTTGCCAGGAGCTTCTGTGAGTGCCCTACAGGGT
GCATTGCTGTCAGGTTTGCTACCGGCATCGTGCAAGTCGAGCATATATGAGGAGAGGGTA
ATGAGGAATTTGGTGCAGCTTGAAAATGCTTACTACTCCATGAGGTCCTCTGTGGACACC
TGTGAAACTAATGTAATCAAACGTCCAGATAACGAGGCTTTGAGGGTCCGTGAAAATTTC
CATCAGCGTCACAGTGATTCTGATGCAAAGGGAGAGAAAACAGACCGTCTTGGATGCTTT
TTTGATGGTTTATGCAAATATGCCCGGCACAATAGGTTTGAAGTACGAGGAATTTTGAAG
AATGCAGATGTACTTAGCTCTCCAAATGTCATCTGTTCATTGAGTTTTGATAGGGATGAA
GAATATTTTGCTGCTGCTGGAGTTTCAAAGAAAATAAAAATATTTGAATTTGATGCACTC
TTAAATGATCGTGTTGATATTCATTACCCACTGGTAGAAATGCCTAGCAAGTCCAAGCTG
AGCTGTGTCTGTTGGAACAGCTATATAAAGAACTACCTGGCATCAACAGACTATGATGGT
ACTGTTCAGCTATGGGATGCTGGCTCTGGTCAAGGATTCACACAGTTTACAGAGCACCGC
AAAAGGGCTTGGTCTGTGAGTTTTTCACAAGTCGACCCTACTAAGTTGGCAAGTGGCAGT
GATGATTGTTGCGTGAAAGTATGGAGTATTAATCAGGCATGTTACTGA

Peptide Sequence

PEP ID

Zm00001d009617_P039
PEP Infomation

pep chromosome:B73_RefGen_v4:8:73346200:73351507:-1 gene:Zm00001d009617 transcript:Zm00001d009617_T039 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

MEGAAAAEVGGGGEDVQIKGAKESGQPAAAAQQPPPLPSGSEALEMPATPLPRDMDWSEH
FSFFTSPGGFAGSSDGARGLASVGLSNSESRPDSVTQRGVDHGAEERVEELTLKNCISAD
AAQPEASAGGSTSGGDRPAVIKGLWGNFTRMARRTSYLASRENAALSYGDIASSRAGDAS
SRENLATSLANNIISRNNDVSGNEAPTSRVGYVNNEFKTPFHSQQILLSPWSNQDNALKV
SSFSNRILDQMRSKTVAPPSGVLGSPLKSKSKGKGVAYQRAREEIRVQANARPRDPLDKI
PTIPTSIHDSVARVDMLFSTSGDVSKSHSEGTSLRELIKPGRQTMSKFEKLHLFKQILDL
VDNCHAQGFTLQHLRPSYFTILSSNQVKYIGSYTTQDLPTSIKQEFAREDLVSRKRAFGH
RIDYQDSNGHGNLMLKHQKVGEQGLVAVRRLANTFLTDKIRDNQIEDNDPGISRQENFSY
TTREHFKFVESYGSNMSSAQHVSSSGTQQPAFELRNIEESWYKSPEELSQFKGTPPSNIY
SLGVLLFELFCCSETWEMHCAAMSNLRQRILPPNFLSESPKEAGFCLWLLHPDPCSRPKA
KEILGCDLINEGRDLSLLDKSPVSISEDDTESSLLLNFLSQLKEEKEMQAAKLSAELGSL
QTDITEIDRRHSAGMRLSLEDMDVLPSSSLPGASVSALQGALLSGLLPASCKSSIYEERV
MRNLVQLENAYYSMRSSVDTCETNVIKRPDNEALRVRENFHQRHSDSDAKGEKTDRLGCF
FDGLCKYARHNRFEVRGILKNADVLSSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDAL
LNDRVDIHYPLVEMPSKSKLSCVCWNSYIKNYLASTDYDGTVQLWDAGSGQGFTQFTEHR
KRAWSVSFSQVDPTKLASGSDDCCVKVWSINQACY

Transcript Sequence

Transcript ID

Zm00001d009617_T039
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:73346200:73351507:-1 gene:Zm00001d009617 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

GCGGCGAGTGTCGCCCTTTGGATCGGGCGAATCATCCTGACCCGCGCCCCGGAACCGCAG
CCAATCGGTCGCGGGAGGGGGGGCTCGTGGCGGCGCTGCGCGCGAGGATGCGCCGCGCGG
GCGGCTCGCTTCTGCTGGCCTGCTGCGCCCGCGCGCGCGCGCCCGCCGCGAGGTACGAGC
GCATGACTCCCCGCCGCTGAACTGAATCGGTCCTGGGCTGGTTTTCGGCTTTTGCGCGAC
TGGGCCCGTGCGCCGTGACCTTATTGCGCGGGCGCCGCGCGGTTTGCGCAGGGTAGGTTT
GGTGCGATGGAAGGGGCGGCGGCGGCGGAGGTGGGCGGCGGCGGCGAGGATGTGCAGATC
AAGGGCGCCAAGGAGAGTGGGCAGCCCGCGGCGGCGGCGCAGCAGCCGCCGCCGCTGCCG
TCCGGCAGCGAGGCGCTGGAGATGCCGGCCACGCCGCTTCCGCGGGACATGGACTGGTCC
GAGCACTTCTCCTTCTTCACCTCGCCGGGCGGGTTCGCGGGCAGCTCGGACGGCGCGAGG
GGCCTCGCCAGCGTCGGCCTGTCCAACTCCGAGTCCAGGCCGGACAGCGTGACGCAGCGC
GGCGTGGACCACGGCGCGGAAGAGAGGGTGGAGGAGCTCACATTGAAGAACTGCATTAGC
GCTGATGCTGCCCAGCCCGAAGCCTCTGCTGGTGGGAGCACGAGCGGTGGGGATAGGCCT
GCTGTTATTAAGGGCCTGTGGGGTAACTTCACACGGATGGCCCGGAGAACCAGCTATTTG
GCCAGCAGGGAAAACGCCGCACTGAGCTATGGCGACATTGCAAGCTCGAGGGCTGGTGAT
GCTTCTAGCAGGGAAAATCTGGCGACGAGCCTTGCCAACAATATCATCTCAAGGAACAAC
GATGTGTCTGGCAATGAGGCACCTACGAGTCGTGTCGGATATGTGAATAATGAGTTCAAG
ACGCCATTTCACAGCCAGCAGATTCTCTTGTCCCCTTGGTCTAATCAGGACAACGCTCTT
AAAGTAAGCAGCTTCTCGAATAGGATTCTTGATCAGATGAGAAGTAAGACTGTGGCACCC
CCATCTGGGGTTCTAGGGTCACCGCTTAAAAGCAAATCAAAAGGTAAAGGGGTTGCATAC
CAACGTGCACGGGAGGAGATCCGAGTGCAAGCTAATGCAAGACCCAGAGACCCTCTGGAC
AAGATCCCGACAATTCCTACCTCAATTCATGATTCTGTGGCCAGAGTGGACATGCTTTTC
AGTACTAGTGGAGATGTTTCAAAATCCCACTCTGAGGGAACTAGCCTGAGGGAACTGATT
AAGCCTGGGCGGCAAACGATGTCCAAGTTTGAGAAATTGCATTTGTTTAAGCAGATCCTT
GATCTTGTGGATAACTGTCATGCACAGGGTTTTACTTTACAACATTTGCGACCATCATAT
TTTACGATCCTATCTTCAAATCAAGTTAAATATATCGGTTCTTATACCACACAAGATTTG
CCAACATCAATCAAACAAGAGTTTGCTAGAGAAGATCTTGTGAGTAGAAAAAGAGCTTTT
GGCCATAGAATTGATTACCAAGACTCTAATGGCCATGGAAATTTGATGCTGAAGCATCAA
AAGGTTGGTGAGCAAGGCTTAGTTGCTGTCAGGCGGCTGGCAAATACATTTTTGACTGAC
AAAATACGCGACAATCAAATTGAAGATAACGATCCAGGTATTTCAAGGCAAGAAAATTTT
AGTTACACTACCAGAGAACATTTTAAGTTCGTCGAATCATATGGCAGCAATATGTCCAGT
GCTCAGCATGTATCTAGTTCTGGAACCCAACAACCAGCATTTGAATTGAGGAATATTGAG
GAAAGCTGGTACAAAAGCCCAGAGGAGCTCAGTCAATTTAAAGGCACACCCCCATCAAAC
ATCTATAGCCTTGGGGTTCTTCTATTTGAGCTCTTTTGCTGTTCTGAGACATGGGAGATG
CACTGTGCTGCAATGTCAAATCTTCGCCAACGCATCCTTCCTCCAAATTTTCTTTCAGAA
AGTCCCAAGGAGGCTGGCTTCTGCCTTTGGTTACTGCATCCAGATCCTTGTTCAAGACCA
AAAGCAAAAGAGATTCTTGGATGTGACTTGATAAATGAGGGTCGGGATTTGTCCTTGTTA
GATAAGTCACCAGTTTCCATCAGTGAAGATGACACTGAATCTAGTTTGCTACTTAACTTC
CTTTCTCAATTGAAAGAAGAAAAGGAGATGCAGGCTGCCAAGTTATCGGCAGAGCTTGGA
AGCTTACAAACAGATATCACAGAGATTGACAGAAGACACTCAGCAGGAATGAGATTGAGT
TTAGAGGATATGGATGTACTGCCAAGTTCTAGTTTGCCAGGAGCTTCTGTGAGTGCCCTA
CAGGGTGCATTGCTGTCAGGTTTGCTACCGGCATCGTGCAAGTCGAGCATATATGAGGAG
AGGGTAATGAGGAATTTGGTGCAGCTTGAAAATGCTTACTACTCCATGAGGTCCTCTGTG
GACACCTGTGAAACTAATGTAATCAAACGTCCAGATAACGAGGCTTTGAGGGTCCGTGAA
AATTTCCATCAGCGTCACAGTGATTCTGATGCAAAGGGAGAGAAAACAGACCGTCTTGGA
TGCTTTTTTGATGGTTTATGCAAATATGCCCGGCACAATAGGTTTGAAGTACGAGGAATT
TTGAAGAATGCAGATGTACTTAGCTCTCCAAATGTCATCTGTTCATTGAGTTTTGATAGG
GATGAAGAATATTTTGCTGCTGCTGGAGTTTCAAAGAAAATAAAAATATTTGAATTTGAT
GCACTCTTAAATGATCGTGTTGATATTCATTACCCACTGGTAGAAATGCCTAGCAAGTCC
AAGCTGAGCTGTGTCTGTTGGAACAGCTATATAAAGAACTACCTGGCATCAACAGACTAT
GATGGTACTGTTCAGCTATGGGATGCTGGCTCTGGTCAAGGATTCACACAGTTTACAGAG
CACCGCAAAAGGGCTTGGTCTGTGAGTTTTTCACAAGTCGACCCTACTAAGTTGGCAAGT
GGCAGTGATGATTGTTGCGTGAAAGTATGGAGTATTAATCAGGCATGTTACTGAAATACA
CCTACTCTTTTCTTTATCAGCTTATCAGGCAGTTTTCTTACTTTTGAGCCCTTATTTTGA
GCATGGATCAATGGATGTTATGTCATTCATACCT