Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009594_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:8:72097609:72103235:1 gene:Zm00001d009594 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	ATGGGACCCCGCGGCGTCGCCCTAGCGCTCCTCGCGGCGGCGCTCCTCCAGGCCCTCGCC CCCGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGCCTGGTGCGGGTCGCGCTG AAGAAGCAGCCCGTCGACCAGAACGCCCGCGTCGCCGCGCGCCTCTCCGCTGAGGAGAGG CAGCGCCTCCTCCTCCGCGGCGCCAACGCCCTGGGCTCGGCCGGCGGCGACGACGACTCC GACGTCATCGCGCTCAATAACTACATGAACGCGCAGTACTTTGGGGAGATCGGCGTCGGG ACGCCGCCGCAGAAGTTCACCGTCATCTTCGACACCGGCAGCTCCAACCTCTGGGTGCCG TCCTCCAAGTGCTATTTCTCGGTGCGTCCTCGTCCGTTCCTTCGCCTCGTCGAGATCGCT TGCTACTTCCACTCGCGCTACAAGTCAGGGCAGTCAAGTACTTATAAGAAGAACGGAAAA CCTGCTGCCATTCAATATGGAACCGGTGCAATTGCTGGTTTTTTCAGTGAGGATAGCGTT AAATTAGGTGATCTGGATGTGAATGATCAGGAATTTATTGAAGCTACAAAGGAGCCAGGC CTTACCTTCATGGTTGCAAAATTTGATGGCATTCTTGGGCTAGGCTTTCAGGAAATATCT GTTGGGAATGCAACACCTGTGTGGTATAACATGGTAAAACAAGGTCTCATCAGTGACCCT GTTTTCTCTTTCTGGTTTAACCGACATGCTGGTGAAGGAGAAGGTGGTGAAATTGTGTTT GGTGGAATGGATTCTAGTCACTACAAGGGTGATCACACCTATGTCCCAGTCACTCAGAAG GGATACTGGCAGTTTAATATGGGTGATGTCCTGGTTGATGGAAAGTCCACTGGGTTTTGT GCTGGTGGTTGTGCAGCAATAGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACAGCC ATTATTACTGAAATCAACGAAAAGATCGGTGCTGCTGGTGTAGTCAGCCAGGAGTGCAAG ACTGTTGTTTCTCAATACGGACAACAGATCCTAGATCTTCTGCTAGCTGAGACGCAACCA GCGAAGATCTGTTCTCAGGTTGGCCTGTGCACTTTTGATGGCACTCACGGTGTTAGCACT GGAATTCGTAGCGTAGTGGATGACAAAGCTGGGAAATCAAATGGTGGTCTCAAGAGTGAT CCAATGTGCAATGCCTGTGAGATGGCTGTGGTATGGATGCAGAACCAACTGGCCCAGAAC AAGACACAGGAGCTCATCCTGACCTACATTAATCAGCTTTGTGAGCGTCTTCCTTCTCCC ATGGGAGAATCAGCCGTGGACTGTGCCAGTCTTGGGTCCATGCCCGACATTGCGTTCACC ATTGGAGGCAAGAAGTTCAAGCTGAAACCGGAGCAGTACATTCTGAAGGTCGGTGAAGGA CAAGCTGCCCAGTGCATCAGTGGATTCACAGCTATGGACATCCCACCACCTCGTGGCCCC CTCTGGATCCTGGGCGATGTTTTCATGGGAGTCTACCACACCGTCTTCGATTACGGCAAG CTGAGGGTTGGCTTCGCGGAGTCGGCCTAA

Peptide Sequence

PEP ID	Zm00001d009594_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:8:72097609:72103235:1 gene:Zm00001d009594 transcript:Zm00001d009594_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	MGPRGVALALLAAALLQALAPASAAAAAAAAAGGLVRVALKKQPVDQNARVAARLSAEER QRLLLRGANALGSAGGDDDSDVIALNNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVP SSKCYFSVRPRPFLRLVEIACYFHSRYKSGQSSTYKKNGKPAAIQYGTGAIAGFFSEDSV KLGDLDVNDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGNATPVWYNMVKQGLISDP VFSFWFNRHAGEGEGGEIVFGGMDSSHYKGDHTYVPVTQKGYWQFNMGDVLVDGKSTGFC AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTVVSQYGQQILDLLLAETQP AKICSQVGLCTFDGTHGVSTGIRSVVDDKAGKSNGGLKSDPMCNACEMAVVWMQNQLAQN KTQELILTYINQLCERLPSPMGESAVDCASLGSMPDIAFTIGGKKFKLKPEQYILKVGEG QAAQCISGFTAMDIPPPRGPLWILGDVFMGVYHTVFDYGKLRVGFAESA

Transcript Sequence

Transcript ID	Zm00001d009594_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:72097609:72103235:1 gene:Zm00001d009594 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	ATGGGACCCCGCGGCGTCGCCCTAGCGCTCCTCGCGGCGGCGCTCCTCCAGGCCCTCGCC CCCGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGCCTGGTGCGGGTCGCGCTG AAGAAGCAGCCCGTCGACCAGAACGCCCGCGTCGCCGCGCGCCTCTCCGCTGAGGAGAGG CAGCGCCTCCTCCTCCGCGGCGCCAACGCCCTGGGCTCGGCCGGCGGCGACGACGACTCC GACGTCATCGCGCTCAATAACTACATGAACGCGCAGTACTTTGGGGAGATCGGCGTCGGG ACGCCGCCGCAGAAGTTCACCGTCATCTTCGACACCGGCAGCTCCAACCTCTGGGTGCCG TCCTCCAAGTGCTATTTCTCGGTGCGTCCTCGTCCGTTCCTTCGCCTCGTCGAGATCGCT TGCTACTTCCACTCGCGCTACAAGTCAGGGCAGTCAAGTACTTATAAGAAGAACGGAAAA CCTGCTGCCATTCAATATGGAACCGGTGCAATTGCTGGTTTTTTCAGTGAGGATAGCGTT AAATTAGGTGATCTGGATGTGAATGATCAGGAATTTATTGAAGCTACAAAGGAGCCAGGC CTTACCTTCATGGTTGCAAAATTTGATGGCATTCTTGGGCTAGGCTTTCAGGAAATATCT GTTGGGAATGCAACACCTGTGTGGTATAACATGGTAAAACAAGGTCTCATCAGTGACCCT GTTTTCTCTTTCTGGTTTAACCGACATGCTGGTGAAGGAGAAGGTGGTGAAATTGTGTTT GGTGGAATGGATTCTAGTCACTACAAGGGTGATCACACCTATGTCCCAGTCACTCAGAAG GGATACTGGCAGTTTAATATGGGTGATGTCCTGGTTGATGGAAAGTCCACTGGGTTTTGT GCTGGTGGTTGTGCAGCAATAGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACAGCC ATTATTACTGAAATCAACGAAAAGATCGGTGCTGCTGGTGTAGTCAGCCAGGAGTGCAAG ACTGTTGTTTCTCAATACGGACAACAGATCCTAGATCTTCTGCTAGCTGAGACGCAACCA GCGAAGATCTGTTCTCAGGTTGGCCTGTGCACTTTTGATGGCACTCACGGTGTTAGCACT GGAATTCGTAGCGTAGTGGATGACAAAGCTGGGAAATCAAATGGTGGTCTCAAGAGTGAT CCAATGTGCAATGCCTGTGAGATGGCTGTGGTATGGATGCAGAACCAACTGGCCCAGAAC AAGACACAGGAGCTCATCCTGACCTACATTAATCAGCTTTGTGAGCGTCTTCCTTCTCCC ATGGGAGAATCAGCCGTGGACTGTGCCAGTCTTGGGTCCATGCCCGACATTGCGTTCACC ATTGGAGGCAAGAAGTTCAAGCTGAAACCGGAGCAGTACATTCTGAAGGTCGGTGAAGGA CAAGCTGCCCAGTGCATCAGTGGATTCACAGCTATGGACATCCCACCACCTCGTGGCCCC CTCTGGATCCTGGGCGATGTTTTCATGGGAGTCTACCACACCGTCTTCGATTACGGCAAG CTGAGGGTTGGCTTCGCGGAGTCGGCCTAAGGAACGTATGGTTTGGCGCCTCCTCCAGAG GAGGCAAAACGCATAACTTGTGTATTTATGCGGCCGGCGGTGTGTGTATATATGCTACAT GTTTAGTGATGCTTTCCGAGACCTGAGACAATGCCCGTCTGTTTTAACCTGGCACAAGGA AATTTCTCGATGTGTTTGCCAAGCCAATCTTGTACCCAATTGTCACCGTGCATCCTGGCA ACGTGTACTCAAAGTATTTTTCCTTGTGTTATGCGTGAGATCTG