Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009570_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:71232543:71233457:1 gene:Zm00001d009570 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 336 description:Splicing factor U2af subunit isoform 1%3B Splicing factor U2af subunit isoform 2%3B Splicing factor U2af subunit isoform 3%3B Splicing factor U2af subunit isoform 4%3B Splicing factor U2af subunit isoform 5
Sequence	ATGGCGGAGCACTTGGCTTCGATCTTTGGTACCGAGAAGGACAGGGTCAACTGCCCTTTT TACTTCAAGATTGGGGCTTGTCGTCATGGGGATCGCTGTTCTCGTCTGCACAACAGGCCA ACTATATCGCCAACTCTTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATAACTCCT GGAGTTGATGCTCAAGGCCAACCTATTGATCCTGAGAAGATGCAGGAGCATTTTGAGGAC TTCTATGAGGACATCTATGAGGAGTTGGGCAAGTTTGGTGAGATTGAGAATCTGAATGTT TGTGATAACCTTGCTGACCACATGATTGGGAATGTCTATGTTCAGTTCAGAGAGGAAGAA CAGGCAGCTGCAGCATACAATGCTCTTCAGGGGCGCTTTTACTCTGGGCGCCCTATAATT GTTGAGTATTCTCCTGTGACCGACTTCCGTGAAGCAACCTGTAGGCAGTTTGAGGAGAAC AGCTGCAACCGTGGTGGCTACTGTAATTTCATGCATGTGAAGCAAATTGGCAGGGATCTC AGGAGGAAGCTGTATGGGCGTTCTGCTTCCAGGAGGTACCATGCGAGAAGCCGAAGCCCT CCACCGCAAAGGAGGGGCTATCGTGAGGACTATCACCACCGTGATCGTGACGAGTACCGT GGCGGCGGCGGCGGCGGTGGACGGGGAAGAGGTAGCAGGCATGACAGGTATGATGATGGA GCAGGTAGAGGCGGCAGGCATGACAGGTACGATGATGGAGCGGGTAGAGGCGGCAGGTAT GAGAGGTATGATGATGGAGGAAGGCGTAGGCATGGTAGCCCCCCGAGGCGTGGAAGGAGC CCGGTCAGGGAAAGCAGCGAGGAGCGAAGGGCCAAGATTGAGCAGTGGAACCGTGAGCGG GAGTCAAAACAGTGA

Peptide Sequence

PEP ID	Zm00001d009570_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:71232543:71233457:1 gene:Zm00001d009570 transcript:Zm00001d009570_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 336 description:Splicing factor U2af subunit isoform 1%3B Splicing factor U2af subunit isoform 2%3B Splicing factor U2af subunit isoform 3%3B Splicing factor U2af subunit isoform 4%3B Splicing factor U2af subunit isoform 5
Sequence	MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGRGSRHDRYDDG AGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPPRRGRSPVRESSEERRAKIEQWNRER ESKQ

Transcript Sequence

Transcript ID	Zm00001d009570_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:71232543:71233457:1 gene:Zm00001d009570 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 336 description:Splicing factor U2af subunit isoform 1%3B Splicing factor U2af subunit isoform 2%3B Splicing factor U2af subunit isoform 3%3B Splicing factor U2af subunit isoform 4%3B Splicing factor U2af subunit isoform 5
Sequence	ATGGCGGAGCACTTGGCTTCGATCTTTGGTACCGAGAAGGACAGGGTCAACTGCCCTTTT TACTTCAAGATTGGGGCTTGTCGTCATGGGGATCGCTGTTCTCGTCTGCACAACAGGCCA ACTATATCGCCAACTCTTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATAACTCCT GGAGTTGATGCTCAAGGCCAACCTATTGATCCTGAGAAGATGCAGGAGCATTTTGAGGAC TTCTATGAGGACATCTATGAGGAGTTGGGCAAGTTTGGTGAGATTGAGAATCTGAATGTT TGTGATAACCTTGCTGACCACATGATTGGGAATGTCTATGTTCAGTTCAGAGAGGAAGAA CAGGCAGCTGCAGCATACAATGCTCTTCAGGGGCGCTTTTACTCTGGGCGCCCTATAATT GTTGAGTATTCTCCTGTGACCGACTTCCGTGAAGCAACCTGTAGGCAGTTTGAGGAGAAC AGCTGCAACCGTGGTGGCTACTGTAATTTCATGCATGTGAAGCAAATTGGCAGGGATCTC AGGAGGAAGCTGTATGGGCGTTCTGCTTCCAGGAGGTACCATGCGAGAAGCCGAAGCCCT CCACCGCAAAGGAGGGGCTATCGTGAGGACTATCACCACCGTGATCGTGACGAGTACCGT GGCGGCGGCGGCGGCGGTGGACGGGGAAGAGGTAGCAGGCATGACAGGTATGATGATGGA GCAGGTAGAGGCGGCAGGCATGACAGGTACGATGATGGAGCGGGTAGAGGCGGCAGGTAT GAGAGGTATGATGATGGAGGAAGGCGTAGGCATGGTAGCCCCCCGAGGCGTGGAAGGAGC CCGGTCAGGGAAAGCAGCGAGGAGCGAAGGGCCAAGATTGAGCAGTGGAACCGTGAGCGG GAGTCAAAACAGTGA