Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009555_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:70016524:70019909:1 gene:Zm00001d009555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline-rich glycoprotein family protein
Sequence	ATGGGGGTGCACCGTGCTGCCTTGTTCTGGTTTGTGCCAACGGTTGCGGGGTTATCGTCT GCGTTGCGTGTGACTGCGGATATGGATCTTCGTTGGCCGCTTTTGAAGCCTAGGGATTTC CAGGAGAACAGGCTGTTGATGTCATTTGTTAATTTCCATGAGCAAGAGAAGATCTCTAAA GAAATCGTAACACACGCTATAGAAAGCTGCATGAAGAAACAAGCAGATAACCTGTTGAAT TCACTGGACGTTATCAGCGGTAGGTTGTCACAGTTGGAGTTATACTGCTATAGACTGGAA AGGTCCATTGGAGAATTACGAAGTGACGTGATGGATTATCATAACGAAGCAAATCTGAAC TTCCGGTGCGTTGAAAAGCAAGTGAAAGAGGTTCAGAAATCTGTGCAGGCTGTTCAGGAA AAGCAGGAGCTTGCTGAAACTCAGAAAGAAATGACCAAACTTCAGATAGTACATGAGGAT TCTGCACAAAAGAGTGAAGGTACTGCTCCATCAGTTTTCATGAATAGGGAAAATGAGGTT GCCCTTGTGCCATTGCACCAAGTAAATGCTGTTCAGTCACCTCCTGTGCAATTCCAAAGT TGCAGTGGCCTTATTCTACAGCAACTGATGCCAGTCCAAGACCAGCAGCGCTCGAACCAA ACCGCTGTGTACTGTATGCGAGGCCAAAGCCATCTGGAGCACAGACAGGCCCAAATGTTC GAAGCTGCTGGTCAATCTCTGCAGACACACACTCGGAAAACTCAGCCACCGACAGTAGTT GAGGTATCTCAGGTAACCAGTCAGGCACCAGAGTTCTACCCTCATCCGCAGCACCAATGG CAACATCAGACCGGCCAGCAGGTTTTCTCACAGGCAAGGCAACCACAACCACATGTACTA CAGCAGCAGTACAGCAACATCCAGCAAGGTCCAGCACAGATGGTTCAGCTGCAAACGTCC TCTCCACATGCTCATAGTACACCACAGGTCACAGTAGTATATCCTCCATACGGGCCTCAT CAGTCTGCCTGTGGTAATGCTGAGGCACGCAGTGGGGGCATAGTTGTGCCACCTTCATAC TCTACAATTTCTTCATCCCACCGGAAGCATCATGAAGCTGCTCCTGTTTATGTACAAAGC AACACAGTTTCTGTTCCACTGGCGGAGCAGCATCAGCAGCTTCATTCACTCGGCAATGGC TCATTTGTACCTCAGCCAAGCAAAGTTAGTCCATGCGGTCTAGCGTCATATACGGTACAA GGGAATGCACAGACCTATAGCCCTGCTTATGGAAGCCCTTCCAGCAATCCTGCTACTATT GTTGCTGTCCTTAATCAACAAGCACATGGCAGTTCTCCCATGGTGCTTCATCACTTGGGA CCCCAGTCAGTGCTGAACCATCCGATAGACATTGCTGAAAAGGTTACTCGGATGGGTTAC TCGAAGGATCAGGTTGAGGGTCTTGCACTCCGTATGGTGGCTGCAGGCCAGCCTGCAGAC CATAACCCCCTGCATGATAGGTTGAGCTCTGTTAGCCATGGTGTAGCTCCTCATGCATGG TCTGGATAG

Peptide Sequence

PEP ID	Zm00001d009555_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:70016524:70019909:1 gene:Zm00001d009555 transcript:Zm00001d009555_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline-rich glycoprotein family protein
Sequence	MGVHRAALFWFVPTVAGLSSALRVTADMDLRWPLLKPRDFQENRLLMSFVNFHEQEKISK EIVTHAIESCMKKQADNLLNSLDVISGRLSQLELYCYRLERSIGELRSDVMDYHNEANLN FRCVEKQVKEVQKSVQAVQEKQELAETQKEMTKLQIVHEDSAQKSEGTAPSVFMNRENEV ALVPLHQVNAVQSPPVQFQSCSGLILQQLMPVQDQQRSNQTAVYCMRGQSHLEHRQAQMF EAAGQSLQTHTRKTQPPTVVEVSQVTSQAPEFYPHPQHQWQHQTGQQVFSQARQPQPHVL QQQYSNIQQGPAQMVQLQTSSPHAHSTPQVTVVYPPYGPHQSACGNAEARSGGIVVPPSY STISSSHRKHHEAAPVYVQSNTVSVPLAEQHQQLHSLGNGSFVPQPSKVSPCGLASYTVQ GNAQTYSPAYGSPSSNPATIVAVLNQQAHGSSPMVLHHLGPQSVLNHPIDIAEKVTRMGY SKDQVEGLALRMVAAGQPADHNPLHDRLSSVSHGVAPHAWSG

Transcript Sequence

Transcript ID	Zm00001d009555_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:70016524:70019909:1 gene:Zm00001d009555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxyproline-rich glycoprotein family protein
Sequence	GGTGGCTCTTTGCACCGCTTTTTTCGAACGCTACTTTAGCTTTTACTCTTCTTTTCTCTT GGCTTCCGCTCCTCGCCCACGCCTCCTCCTCCAGTCCTCCCTTTCGTCGTCGCTTCCCTC CCCTTCCCGTTCGAATCCTCTGACCACCGCAGAGCCTCCCCCCTGAGGAAACCCTAGCGC AGCCGCCGACCGCCGCCGACCCGTAGCATGGCGTCCCCGGCCCGGCCCGTCGCCGCGTCC GTCTCCGGCGCCTTCGGCCTCTCGCCCGACCCCAAGCGCTGCTCCTTCGACCAGGCGCTC CGGCACAAGGAGCGGCCGGTTCGTTCATTGCTCGTTGCCGGGGATGGGGGTGCACCGTGC TGCCTTGTTCTGGTTTGTGCCAACGGTTGCGGGGTTATCGTCTGCGTTGCGTGTGACTGC GGATATGGATCTTCGTTGGCCGCTTTTGAAGCCTAGGGATTTCCAGGAGAACAGGCTGTT GATGTCATTTGTTAATTTCCATGAGCAAGAGAAGATCTCTAAAGAAATCGTAACACACGC TATAGAAAGCTGCATGAAGAAACAAGCAGATAACCTGTTGAATTCACTGGACGTTATCAG CGGTAGGTTGTCACAGTTGGAGTTATACTGCTATAGACTGGAAAGGTCCATTGGAGAATT ACGAAGTGACGTGATGGATTATCATAACGAAGCAAATCTGAACTTCCGGTGCGTTGAAAA GCAAGTGAAAGAGGTTCAGAAATCTGTGCAGGCTGTTCAGGAAAAGCAGGAGCTTGCTGA AACTCAGAAAGAAATGACCAAACTTCAGATAGTACATGAGGATTCTGCACAAAAGAGTGA AGGTACTGCTCCATCAGTTTTCATGAATAGGGAAAATGAGGTTGCCCTTGTGCCATTGCA CCAAGTAAATGCTGTTCAGTCACCTCCTGTGCAATTCCAAAGTTGCAGTGGCCTTATTCT ACAGCAACTGATGCCAGTCCAAGACCAGCAGCGCTCGAACCAAACCGCTGTGTACTGTAT GCGAGGCCAAAGCCATCTGGAGCACAGACAGGCCCAAATGTTCGAAGCTGCTGGTCAATC TCTGCAGACACACACTCGGAAAACTCAGCCACCGACAGTAGTTGAGGTATCTCAGGTAAC CAGTCAGGCACCAGAGTTCTACCCTCATCCGCAGCACCAATGGCAACATCAGACCGGCCA GCAGGTTTTCTCACAGGCAAGGCAACCACAACCACATGTACTACAGCAGCAGTACAGCAA CATCCAGCAAGGTCCAGCACAGATGGTTCAGCTGCAAACGTCCTCTCCACATGCTCATAG TACACCACAGGTCACAGTAGTATATCCTCCATACGGGCCTCATCAGTCTGCCTGTGGTAA TGCTGAGGCACGCAGTGGGGGCATAGTTGTGCCACCTTCATACTCTACAATTTCTTCATC CCACCGGAAGCATCATGAAGCTGCTCCTGTTTATGTACAAAGCAACACAGTTTCTGTTCC ACTGGCGGAGCAGCATCAGCAGCTTCATTCACTCGGCAATGGCTCATTTGTACCTCAGCC AAGCAAAGTTAGTCCATGCGGTCTAGCGTCATATACGGTACAAGGGAATGCACAGACCTA TAGCCCTGCTTATGGAAGCCCTTCCAGCAATCCTGCTACTATTGTTGCTGTCCTTAATCA ACAAGCACATGGCAGTTCTCCCATGGTGCTTCATCACTTGGGACCCCAGTCAGTGCTGAA CCATCCGATAGACATTGCTGAAAAGGTTACTCGGATGGGTTACTCGAAGGATCAGGTTGA GGGTCTTGCACTCCGTATGGTGGCTGCAGGCCAGCCTGCAGACCATAACCCCCTGCATGA TAGGTTGAGCTCTGTTAGCCATGGTGTAGCTCCTCATGCATGGTCTGGATAGGTAAGAAC GACAAATGCAGCCGTCACGCTTACTTATTACTCATGAGGTGTTTGTGTGATATATCTCGG TATGTGCTTTATTATCGTCGGAAATCTTCAGGTATTTCCTCTGGCGTCTTTTTTTATCAG CCAGGATTGCATATCCACCAGCTTATTTTTACCAGTTGGAGGATCGAGATGAAATAAGTC TGTTTAGATTAGTTAAAGTGATCCTGGCATATGTCCTGCCTTTTAATGGACACATGCTTG TAATTTTCTCGTGGACTTGCACACGCATGATTGGAATATAAAACGATACGATAATTTGTT GGTTGC