Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009548_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:8:69755645:69758896:1 gene:Zm00001d009548 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGTCTTCAGTTGGGAGAAGCAATGGCACCAGGGCGGCGAATGGTGCAGCTGCCATCAGT ACTTCCACGACGGAAGCAGGCTCAGCCGACGCCAGATTTCACTCCCAACTACTACATCAG GACAGGCAAAGTAGATGGGCTGGCTGCTTTTCAGGCTTATCATGTTTCGGATCGCAGAAG GGCGGGAAAAGAATTGTTCCTGCAGCACGCACTTCTGATGGGAATGGATCAAATACTCGT GGAAATGGTCTCCAGTCTGGTGCCAATTCAAACCAAAATCTGCCTATGAATTTATCTCTT CTAGCTCCACCATCATCACCAGCATCCTTCTCAAACTCTGCGCTTCCTTCGACTGCTCAA TCACCGAATTGCTTTCTGTCTGTATCTGCAAACTCTCCTGGTGGTCCAACGTCCAATATG TTCGCTGTTGGGCCATATGCTAATGAACCTCAACTTGTCTCACCACCTGTCTTCTCAACT TACACAACTGAGCCATCCACTGCACCGTTGACCCCACCACCTGAGCTGGCTCATGCAACT ACACCTTCTTCTCCAGATGTTCCATATGCTAGATTTCTTTCTTCTTCTATGGGTATCAAA ACTGCCAGCAAGGATCACAACATGCCTTTCCTATCAACAACCTATTCTGGTGGTTCAGGA CTCCAGACATCTTATCCACTTTACCCTGAAAGCCCCTGTAGCAGCCTCATCTCACCGGCT TCAGTAACTCCGAGGACTGGTCTATCTTCACCTATACCTGAGCAAGAGGTTCCTCCTGCC CATTGGAAGACCTCTAGGTCTGCCTGCGACACGCCATATTTCAGGGCTTCGCCCATTCCC GAGCAAGAAACCACTGCACAATGGAAGACCTCTAGATCTGCTTGTGACACACCGTATGCC AGGACCTCACCAACCAATATATTTGGGCTGGATTCATCTACACCGAGAAACTATATGCTA GACAACAATTTCTTTCGGCCAGCGGCATCTGCTCAATTCTACCTGGACCAGGCTCAGCAG ACATTTTCACATAATGGCGGAAGGGTCAGTGTATCCAGGGAGAAGCAAGGTGCCGATGAA ATTGAAGCTTACAGGGCTTCATTTGGATTTAGTGCGGATGAAATTGTCCAATCTCAGTCT TATGTGGGAATACCGGATGCAGTTGATGAATCATTCAGTATATCACCATTTGGAAACAAT ACTCCAGCTACTGAGATCTGCCCATTCAGTGATCTGCCTAATGAGGTGGATAAATCATGT GCCTACGCGAAAGATGACACAAGCCCAAAGAAATCAGCAAACCAGCTCTCCACTGATTCT CCAAACAAAGTTCTGCGTTTGGACGTGTTCAAAGGAACAAAAGGAGGTCATCAGTCTGAG GACGAGTGTATCAGGAAAGATGGTCATCTTTTCAGAAAGACAGCAGATGAAATATCCCTA AAACCCATAGAAGTAAGAAAGAAATCGCTTCCTGGCCATTCTTGCTCGGATGCAGAGATC GAGTACAGGAGGACACGGAGTTTAAGGGATGCCAACGGCGTTCTATCACGGCGCAGTGCA TTGGCAAGACAGCTGCACTAA

Peptide Sequence

PEP ID	Zm00001d009548_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:8:69755645:69758896:1 gene:Zm00001d009548 transcript:Zm00001d009548_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MSSVGRSNGTRAANGAAAISTSTTEAGSADARFHSQLLHQDRQSRWAGCFSGLSCFGSQK GGKRIVPAARTSDGNGSNTRGNGLQSGANSNQNLPMNLSLLAPPSSPASFSNSALPSTAQ SPNCFLSVSANSPGGPTSNMFAVGPYANEPQLVSPPVFSTYTTEPSTAPLTPPPELAHAT TPSSPDVPYARFLSSSMGIKTASKDHNMPFLSTTYSGGSGLQTSYPLYPESPCSSLISPA SVTPRTGLSSPIPEQEVPPAHWKTSRSACDTPYFRASPIPEQETTAQWKTSRSACDTPYA RTSPTNIFGLDSSTPRNYMLDNNFFRPAASAQFYLDQAQQTFSHNGGRVSVSREKQGADE IEAYRASFGFSADEIVQSQSYVGIPDAVDESFSISPFGNNTPATEICPFSDLPNEVDKSC AYAKDDTSPKKSANQLSTDSPNKVLRLDVFKGTKGGHQSEDECIRKDGHLFRKTADEISL KPIEVRKKSLPGHSCSDAEIEYRRTRSLRDANGVLSRRSALARQLH

Transcript Sequence

Transcript ID	Zm00001d009548_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:69755645:69758896:1 gene:Zm00001d009548 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ACTCTCACTCTCCCTTTCTCTCGTGGAGACGACTGGGCGACCGCCGGCGCCGACCTACAC CAGGTGCCCAGGCCTTCGTCGGGACCATCGCCGGCGACGAACACCCACCAGCTGGATCTG ATCCAATTACAGTCAGAAATGTCTTCAGTTGGGAGAAGCAATGGCACCAGGGCGGCGAAT GGTGCAGCTGCCATCAGTACTTCCACGACGGAAGCAGGCTCAGCCGACGCCAGATTTCAC TCCCAACTACTACATCAGGACAGGCAAAGTAGATGGGCTGGCTGCTTTTCAGGCTTATCA TGTTTCGGATCGCAGAAGGGCGGGAAAAGAATTGTTCCTGCAGCACGCACTTCTGATGGG AATGGATCAAATACTCGTGGAAATGGTCTCCAGTCTGGTGCCAATTCAAACCAAAATCTG CCTATGAATTTATCTCTTCTAGCTCCACCATCATCACCAGCATCCTTCTCAAACTCTGCG CTTCCTTCGACTGCTCAATCACCGAATTGCTTTCTGTCTGTATCTGCAAACTCTCCTGGT GGTCCAACGTCCAATATGTTCGCTGTTGGGCCATATGCTAATGAACCTCAACTTGTCTCA CCACCTGTCTTCTCAACTTACACAACTGAGCCATCCACTGCACCGTTGACCCCACCACCT GAGCTGGCTCATGCAACTACACCTTCTTCTCCAGATGTTCCATATGCTAGATTTCTTTCT TCTTCTATGGGTATCAAAACTGCCAGCAAGGATCACAACATGCCTTTCCTATCAACAACC TATTCTGGTGGTTCAGGACTCCAGACATCTTATCCACTTTACCCTGAAAGCCCCTGTAGC AGCCTCATCTCACCGGCTTCAGTAACTCCGAGGACTGGTCTATCTTCACCTATACCTGAG CAAGAGGTTCCTCCTGCCCATTGGAAGACCTCTAGGTCTGCCTGCGACACGCCATATTTC AGGGCTTCGCCCATTCCCGAGCAAGAAACCACTGCACAATGGAAGACCTCTAGATCTGCT TGTGACACACCGTATGCCAGGACCTCACCAACCAATATATTTGGGCTGGATTCATCTACA CCGAGAAACTATATGCTAGACAACAATTTCTTTCGGCCAGCGGCATCTGCTCAATTCTAC CTGGACCAGGCTCAGCAGACATTTTCACATAATGGCGGAAGGGTCAGTGTATCCAGGGAG AAGCAAGGTGCCGATGAAATTGAAGCTTACAGGGCTTCATTTGGATTTAGTGCGGATGAA ATTGTCCAATCTCAGTCTTATGTGGGAATACCGGATGCAGTTGATGAATCATTCAGTATA TCACCATTTGGAAACAATACTCCAGCTACTGAGATCTGCCCATTCAGTGATCTGCCTAAT GAGGTGGATAAATCATGTGCCTACGCGAAAGATGACACAAGCCCAAAGAAATCAGCAAAC CAGCTCTCCACTGATTCTCCAAACAAAGTTCTGCGTTTGGACGTGTTCAAAGGAACAAAA GGAGGTCATCAGTCTGAGGACGAGTGTATCAGGAAAGATGGTCATCTTTTCAGAAAGACA GCAGATGAAATATCCCTAAAACCCATAGAAGTAAGAAAGAAATCGCTTCCTGGCCATTCT TGCTCGGATGCAGAGATCGAGTACAGGAGGACACGGAGTTTAAGGGATGCCAACGGCGTT CTATCACGGCGCAGTGCATTGGCAAGACAGCTGCACTAATATGGTACTAGTATGCAGGGT GATTTCATAGTTCATGTAGCCTAGTGTGCATTGGATCCGAGCTGTCATTAGAGTAATCTG TAGGGCAAAGAGTAGCCTCTACCGTATATGAGGATCATATTGCCAGATTGTGCTCTAGAT ATGTGATTATGAGCCTGTACTCTGTTTGAACTCCAAGATCCTCTTTGTAGGCACACTCCA ATCGTATGCAGGAGCTGTGAGATGGAATAGCGTTGGTACATTACAGGAGTTCGTGTTTCG GTCTTCCTCTTCCTGATGATGTAACTTGTGTTTGAATCTTGCAGAATGCTGGTTTGGAAT CTTTGTGCCTTTTTCTTCGCGTATGTCAGCAAGACAGCAACTTGTGTAAC