Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009532_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:69164642:69168927:-1 gene:Zm00001d009532 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 36 description:IAA19-auxin-responsive Aux/IAA family member

Sequence

ATGCCGCCGCCGCCGCCGCTCCTCGAGCCGCGCGACTACCTCGGCGCCGGCGCCACCTCG
TCGTGCTGCTCGTCGTGCTGCTCCTCCGGCCGCGAGGGCGCGGGGCCCCACCTCGCGCTG
CGGCTCGGGCTTCCGGGGTCCGACGACTCCCCCGGCCGCGGCGCGGACACGGAGCACGCC
CGCGCCCACGTCGACGCCGCGCTCACCCTCGGCCCCGGCCCCGGCCCCGCGCCTCCCAGG
GGCAGCGCCAAGCGCGGGTTCGCCGACTCCCTCGACCGGTCCGCGAAGCTGGACGGCGTT
GCCGCGGATGACGCTGCTGGGGGCGTCACGCGGGTAGCTGGAGCTGCTGCCGGAGCTCCG
CCCGCTGCCAAGGCACAAGTTGTTGGATGGCCGCCTGTTAGGAGCTACCGGAAGAATACC
CTAGCTGCCAGTGCCACAAAGACAAATGGGGGAGATGAAGGTAGGAGTGAGGCGGGATGC
TGTTATGTCAAGGTCAGCATGGATGGAGCCCCATACCTAAGGAAGGTGGACCTCAAGACC
TATTCAAGCTATGAGGATCTCTCGCTTGGTCTGGAGAAAATGTTCAGTTGCTTCATCACT
GGTCAAAACAGTTCATGCAAGACTTCAAGAAGGGATAGGCTTACTGATGGTTCTAGGGTT
GATGCCCTTCAGGACCAAGAATATGTCCTTACTTACGAAGATAAAGATGCTGACTGGATG
CTCGTTGGTGATCTGCCCTGGGACTTGTTCACCACATTTTGCCGGAAACTTAGGATCATG
AGAGGCTCTGATGCTGCTGGCATGGCTCCTCCAAGACCACCGGAACAGACAGTTCGGAAC
AAATGA

Peptide Sequence

PEP ID

Zm00001d009532_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:69164642:69168927:-1 gene:Zm00001d009532 transcript:Zm00001d009532_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 36 description:IAA19-auxin-responsive Aux/IAA family member

Sequence

MPPPPPLLEPRDYLGAGATSSCCSSCCSSGREGAGPHLALRLGLPGSDDSPGRGADTEHA
RAHVDAALTLGPGPGPAPPRGSAKRGFADSLDRSAKLDGVAADDAAGGVTRVAGAAAGAP
PAAKAQVVGWPPVRSYRKNTLAASATKTNGGDEGRSEAGCCYVKVSMDGAPYLRKVDLKT
YSSYEDLSLGLEKMFSCFITGQNSSCKTSRRDRLTDGSRVDALQDQEYVLTYEDKDADWM
LVGDLPWDLFTTFCRKLRIMRGSDAAGMAPPRPPEQTVRNK

Transcript Sequence

Transcript ID

Zm00001d009532_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:69164642:69168927:-1 gene:Zm00001d009532 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 36 description:IAA19-auxin-responsive Aux/IAA family member

Sequence

CTCTGCTCAGCTCGAACGAACAAAAAGGACTCACCTCGGCCCTCTCCTCTTGTGCTTCTG
CTTCCCCACCGAGTCTCCTCAACCCCAGGCACTCGCCCTCTGTCCCCTCCCTTCCTCGCC
TCCGATGCCGCCGCCGCCGCCGCTCCTCGAGCCGCGCGACTACCTCGGCGCCGGCGCCAC
CTCGTCGTGCTGCTCGTCGTGCTGCTCCTCCGGCCGCGAGGGCGCGGGGCCCCACCTCGC
GCTGCGGCTCGGGCTTCCGGGGTCCGACGACTCCCCCGGCCGCGGCGCGGACACGGAGCA
CGCCCGCGCCCACGTCGACGCCGCGCTCACCCTCGGCCCCGGCCCCGGCCCCGCGCCTCC
CAGGGGCAGCGCCAAGCGCGGGTTCGCCGACTCCCTCGACCGGTCCGCGAAGCTGGACGG
CGTTGCCGCGGATGACGCTGCTGGGGGCGTCACGCGGGTAGCTGGAGCTGCTGCCGGAGC
TCCGCCCGCTGCCAAGGCACAAGTTGTTGGATGGCCGCCTGTTAGGAGCTACCGGAAGAA
TACCCTAGCTGCCAGTGCCACAAAGACAAATGGGGGAGATGAAGGTAGGAGTGAGGCGGG
ATGCTGTTATGTCAAGGTCAGCATGGATGGAGCCCCATACCTAAGGAAGGTGGACCTCAA
GACCTATTCAAGCTATGAGGATCTCTCGCTTGGTCTGGAGAAAATGTTCAGTTGCTTCAT
CACTGGTCAAAACAGTTCATGCAAGACTTCAAGAAGGGATAGGCTTACTGATGGTTCTAG
GGTTGATGCCCTTCAGGACCAAGAATATGTCCTTACTTACGAAGATAAAGATGCTGACTG
GATGCTCGTTGGTGATCTGCCCTGGGACTTGTTCACCACATTTTGCCGGAAACTTAGGAT
CATGAGAGGCTCTGATGCTGCTGGCATGGCTCCTCCAAGACCACCGGAACAGACAGTTCG
GAACAAATGAGGGCGGACAGCTTACTTACCTGGCGCTGAACTGAAGGGAGAGCGACGCTG
CCTTGGTCAGGCCTTCTTTCACTTGTGCAGTGGGATCTGCGTCCTGCTGTCTCGGACGCC
CATTTTGCCCACGAGCTGGTCGTCACGTGCTGTCGCTTTTTGTCTGGGAAAGATAGCGTA
CTGCTTGCTGTATGATACTTTCATCTGTGTTCGGAAGTTTGTAGCGCTTCATATCCTGGA
AGGGAGTAAAGAAAATGTCCATGCTGTCCGGTGAGAATTTCTTTC