Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d009339_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:57192847:57198970:-1 gene:Zm00001d009339 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit

Sequence

ATGGGAGTATATGATGCTATGAAATTTTGCAAAGCTGATGTGTCAACTGTTTGCTTTGGA
TTGGCGGCTTCAATGGGTGCATTTTTACTTGCTGCTGGGACAAAGGGTAAGAGGTACTGC
ATGCCAAATGCGAGGATTATGATCCATCAGCCATCAGGTGGCGCTGGCGGGAAAGTCACA
GAGATGGGACTACAGATAAGAGAGATGATGTACGAAAAGATTAAGATCAATAAAATAATG
TCGAGAATTACTGGAAAATCTGAGGAGCAGATTGATGAAGACACGAAGTTTGATTATTTC
ATGAGTCCTTCGGAAGCCAAGGATTATGGGATAGTTGACAATATCATAGATGAGGGGAAA
CCAGGGTTGGTAGCTCCCTTGGCAGGATCTGTTCCGCCTCCCAAATCGCGTGTGTGGTAC
TTGTGGAAGGCTTCGGGGCCGACCAGGAAGATCATGAAACATCTACCTTCAGAGGAGAAA
CTAATTCACAATGGTAACGGAAGTGCAACTGGAGATGATGGAAAGCTCAAGGAGGCAACG
GCAACTTGA

Peptide Sequence

PEP ID

Zm00001d009339_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:57192847:57198970:-1 gene:Zm00001d009339 transcript:Zm00001d009339_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit

Sequence

MGVYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARIMIHQPSGGAGGKVT
EMGLQIREMMYEKIKINKIMSRITGKSEEQIDEDTKFDYFMSPSEAKDYGIVDNIIDEGK
PGLVAPLAGSVPPPKSRVWYLWKASGPTRKIMKHLPSEEKLIHNGNGSATGDDGKLKEAT
AT

Transcript Sequence

Transcript ID

Zm00001d009339_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:57192847:57198970:-1 gene:Zm00001d009339 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit

Sequence

GGTGGATGATACAAGTGCTGATCTCATTATCAGCCAACTCCTACTATTGGATGCAGAGGA
CCAGACTAAAGATATTAAATTGTTTATCAACTCACCTGGAGGCTCTATAACAGCAGGGAT
GGGAGTATATGATGCTATGAAATTTTGCAAAGCTGATGTGTCAACTGTTTGCTTTGGATT
GGCGGCTTCAATGGGTGCATTTTTACTTGCTGCTGGGACAAAGGGTAAGAGGTACTGCAT
GCCAAATGCGAGGATTATGATCCATCAGCCATCAGGTGGCGCTGGCGGGAAAGTCACAGA
GATGGGACTACAGATAAGAGAGATGATGTACGAAAAGATTAAGATCAATAAAATAATGTC
GAGAATTACTGGAAAATCTGAGGAGCAGATTGATGAAGACACGAAGTTTGATTATTTCAT
GAGTCCTTCGGAAGCCAAGGATTATGGGATAGTTGACAATATCATAGATGAGGGGAAACC
AGGGTTGGTAGCTCCCTTGGCAGGATCTGTTCCGCCTCCCAAATCGCGTGTGTGGTACTT
GTGGAAGGCTTCGGGGCCGACCAGGAAGATCATGAAACATCTACCTTCAGAGGAGAAACT
AATTCACAATGGTAACGGAAGTGCAACTGGAGATGATGGAAAGCTCAAGGAGGCAACGGC
AACTTGAAGACATTTTAGGTGATAAATAGTAGGTCGATAATAGAATGGCTTAGTGCATTA
CCTGTATTTTAAATCATTGTTTGAATACAGATTATTGGAGGATGTTAATACAGTGCAGTA
TTTTGGATGCTGCGTTTTCATGGGG