Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009183_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:8:41566679:41571798:-1 gene:Zm00001d009183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dual specificity protein phosphatase PHS1
Sequence	ATGGAAGAGGGGACCACGGAACCTGGATCATTCTCCCGCTCTTCCTCCTTCGTTGGATTC GAGGAGTGGGTGGCATTGGTGAGGAAACGCAATGGGAAGGCCTCTTCGTGCGGGCGTCTG GGTCTCCGTTCAACAGCCAGTTCAGAAGTACTAGAACTTGCAGATCCTGATAGCAATGTC ATTAATCCTGACCCTTGTGACCAAGTGCCAGAAGGAATCCTTTGGGAGAGGCTTGGGAGG GTTTCCATGATGGATATTGAGTCAAGTGACTTCAGTTGGACCTCTCTCACCTCACTGCAC CATACAAAACATACGGCTACAAGTACTGATCCATCTGAGGATGACATTAGCAGAAGTTTT GAGGTGACAGTAAATTCTGGGGGCATTGTTTTTATTGCATTATTCAAAGCTATTGAAAAT GTTGATCTTCCGTCCAAGGAAACAGCTGCAGTAATTAAAATAGCACCTTCAAGGATGGCC ACACAGTCTGAACGCTTTGGGTACGAACTCGCTAAATGGCTTGGAGTGAGAACTCCTCAA GGTAGAGTCATTCATAGCTCCTCAGATGAATGGCAACAAGTCAAGGATGCAGTTGAAAAT GCTCGAAATGCATCGATAGCTTCTGGTGATGAACTTGAGGAGATGATTTGCGCCGAGGTT TTAGAAGCCCTTGAATTGAGTCGTTGCCTATTTCTGATGAATTATGTACATGGCTCCGCT CTGCTAGAGAATGTAATGCCCTTCGAGTCACGGCAAGCTGCTGAAAAAACTGCTGAAGCA TTAGGTAGGGTCTTAATCTTGGACCTCGTATTGAGGAATGAGGATAGACTGCGATGCCGT CCCCTTGGCTGGCGTGGAAATTATGCAAATCTACTTGTTGCCAACAGGGAAGCTTATGCC AACCTTGACTCACTAGATGATGTTTATGATTCTGCTATCATTCGATACAAGCCAGAGATC ATTAGAAGCCCTCAGAAACAGAAGCAGAGAAGAGCTGTTTCAATTAGTGGCAGTATTGGC TCAGATGTCTCTGACCTCACATTGGAGGACTCTTATGCTTCTAGTGGACATGTGTTTTCT AGCTTTAATATTGTAGCCATTGATTCAGGTGTACCACGCAGGCCACCAGCCAGTAAGCGG GCAAAAGATCAGGAGAGCTACCCCAAACTAGTGGAGTTAACATTGAACAACTTCGACTAT TCTTCCAAACTTCTGTTTGAGGTGTCCTTCGGAAAACTTGGCACCCCAGGACATGAAGAA TTTGATGTACCATCAGACTACAGTTATAATTCTCCTCTCTCTGAGAGTGATATGGTAGCA ACAGTGCATTCATTCCGAGGAGGTTTTCGTAGTGCTCTGAGAGACCTTCAGCGATTCCAC ATTTTTCTCATCACACTGTATCAGAAGCTGGATGGTCTATTAAAAATTTTCTTCAACCTT ATGTATAAATGTTCCAATGAATATGCTAGGGAGGATGCTGGTACTTCGGATTCACCATTG TGTTCAGTGGAACCACAAGGAGATTCAAATGATACTGATGTTCCAAGGCATCTGCGTAAG CCTTCCCGAACCTTATCCCGTGAGAGTCTAGACCAATCATCTCCTTGTCGGGATAGCTTT ATCACCAGACATTTCAAAGGAAATGGTGATTCCTCCCGTGGTCTTCGGTTGACAATGAAG CTGCGAGATTTTAACAAGTATGCCAAGGTGAAGACCTTTGAAGTGTGGATTGATAAATTG TCTATTATAAACTGTCTGACGTAG

Peptide Sequence

PEP ID	Zm00001d009183_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:8:41566679:41571798:-1 gene:Zm00001d009183 transcript:Zm00001d009183_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dual specificity protein phosphatase PHS1
Sequence	MEEGTTEPGSFSRSSSFVGFEEWVALVRKRNGKASSCGRLGLRSTASSEVLELADPDSNV INPDPCDQVPEGILWERLGRVSMMDIESSDFSWTSLTSLHHTKHTATSTDPSEDDISRSF EVTVNSGGIVFIALFKAIENVDLPSKETAAVIKIAPSRMATQSERFGYELAKWLGVRTPQ GRVIHSSSDEWQQVKDAVENARNASIASGDELEEMICAEVLEALELSRCLFLMNYVHGSA LLENVMPFESRQAAEKTAEALGRVLILDLVLRNEDRLRCRPLGWRGNYANLLVANREAYA NLDSLDDVYDSAIIRYKPEIIRSPQKQKQRRAVSISGSIGSDVSDLTLEDSYASSGHVFS SFNIVAIDSGVPRRPPASKRAKDQESYPKLVELTLNNFDYSSKLLFEVSFGKLGTPGHEE FDVPSDYSYNSPLSESDMVATVHSFRGGFRSALRDLQRFHIFLITLYQKLDGLLKIFFNL MYKCSNEYAREDAGTSDSPLCSVEPQGDSNDTDVPRHLRKPSRTLSRESLDQSSPCRDSF ITRHFKGNGDSSRGLRLTMKLRDFNKYAKVKTFEVWIDKLSIINCLT

Transcript Sequence

Transcript ID	Zm00001d009183_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:41566679:41571798:-1 gene:Zm00001d009183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dual specificity protein phosphatase PHS1
Sequence	GGCACCACCTTTCCCTTCGCCCGCAGGCTTTTCCGATCCGCAACCAGACCAAACTCCACA ACATTTCCTCAAGCTGTTCCTTCAAGAAACCTGGATCAATCCAACCTTCAATCGCACAGT CCGTGGGATCTCCCTTGAGTTGCGATGGAAGAGGGGACCACGGAACCTGGATCATTCTCC CGCTCTTCCTCCTTCGTTGGATTCGAGGAGTGGGTGGCATTGGTGAGGAAACGCAATGGG AAGGCCTCTTCGTGCGGGCGTCTGGGTCTCCGTTCAACAGCCAGTTCAGAAGTACTAGAA CTTGCAGATCCTGATAGCAATGTCATTAATCCTGACCCTTGTGACCAAGTGCCAGAAGGA ATCCTTTGGGAGAGGCTTGGGAGGGTTTCCATGATGGATATTGAGTCAAGTGACTTCAGT TGGACCTCTCTCACCTCACTGCACCATACAAAACATACGGCTACAAGTACTGATCCATCT GAGGATGACATTAGCAGAAGTTTTGAGGTGACAGTAAATTCTGGGGGCATTGTTTTTATT GCATTATTCAAAGCTATTGAAAATGTTGATCTTCCGTCCAAGGAAACAGCTGCAGTAATT AAAATAGCACCTTCAAGGATGGCCACACAGTCTGAACGCTTTGGGTACGAACTCGCTAAA TGGCTTGGAGTGAGAACTCCTCAAGGTAGAGTCATTCATAGCTCCTCAGATGAATGGCAA CAAGTCAAGGATGCAGTTGAAAATGCTCGAAATGCATCGATAGCTTCTGGTGATGAACTT GAGGAGATGATTTGCGCCGAGGTTTTAGAAGCCCTTGAATTGAGTCGTTGCCTATTTCTG ATGAATTATGTACATGGCTCCGCTCTGCTAGAGAATGTAATGCCCTTCGAGTCACGGCAA GCTGCTGAAAAAACTGCTGAAGCATTAGGTAGGGTCTTAATCTTGGACCTCGTATTGAGG AATGAGGATAGACTGCGATGCCGTCCCCTTGGCTGGCGTGGAAATTATGCAAATCTACTT GTTGCCAACAGGGAAGCTTATGCCAACCTTGACTCACTAGATGATGTTTATGATTCTGCT ATCATTCGATACAAGCCAGAGATCATTAGAAGCCCTCAGAAACAGAAGCAGAGAAGAGCT GTTTCAATTAGTGGCAGTATTGGCTCAGATGTCTCTGACCTCACATTGGAGGACTCTTAT GCTTCTAGTGGACATGTGTTTTCTAGCTTTAATATTGTAGCCATTGATTCAGGTGTACCA CGCAGGCCACCAGCCAGTAAGCGGGCAAAAGATCAGGAGAGCTACCCCAAACTAGTGGAG TTAACATTGAACAACTTCGACTATTCTTCCAAACTTCTGTTTGAGGTGTCCTTCGGAAAA CTTGGCACCCCAGGACATGAAGAATTTGATGTACCATCAGACTACAGTTATAATTCTCCT CTCTCTGAGAGTGATATGGTAGCAACAGTGCATTCATTCCGAGGAGGTTTTCGTAGTGCT CTGAGAGACCTTCAGCGATTCCACATTTTTCTCATCACACTGTATCAGAAGCTGGATGGT CTATTAAAAATTTTCTTCAACCTTATGTATAAATGTTCCAATGAATATGCTAGGGAGGAT GCTGGTACTTCGGATTCACCATTGTGTTCAGTGGAACCACAAGGAGATTCAAATGATACT GATGTTCCAAGGCATCTGCGTAAGCCTTCCCGAACCTTATCCCGTGAGAGTCTAGACCAA TCATCTCCTTGTCGGGATAGCTTTATCACCAGACATTTCAAAGGAAATGGTGATTCCTCC CGTGGTCTTCGGTTGACAATGAAGCTGCGAGATTTTAACAAGTATGCCAAGGTGAAGACC TTTGAAGTGTGGATTGATAAATTGTCTATTATAAACTGTCTGACGTAGGTTTCTAGTTGT TTTTTTCACTCTTATAGATTGTCCCACTATTTAGTTGCAGGAAGCCAAATAGCTAAATGG CTTCATGATTTTTTTTACATAAGAAGGGCCTCATGATCTGCTTATGGATTATCATAATTT AAGTATCTAGATTATATAATTCACCTAATAATTTGTGTTGTTTGTTTGTCTTTTAACTTA TTTAAGCTGGATTATATAATCTAGAGGGTAAACAAACAGGGCAAGTTTATCATGTGATTC TATTAGTCATTGAACACATTTTTACAGATAGACAGTGAATTAAGCAAAGAGATAGAACAA TGGAATGACATGCTGAGGACTGAAGTAGTAAAGTTGTGTCAAGACAACAATTTTCAAACA GGTTTTTTTGAAGGCACTGATAATAGCACTGTTGTTGATGCTTACGAGTTGAAGGTAAAT CTAAATGTACACTCTGTACTAACTACGTGTACACATTAATTGAACCTATCGAGCAATTCT GTTGTTAGGTTCGACTTGAGCACATTCTCGAGAGGATATCTTTGATCTCTGATGCTGCAA GTACTGAGCGTCCATCACAGATCACAGATTATCTGTATATTGGTGGTGCTCTTGCTGCTC GGTCAACACACACACTTAAACACCTTGGCATCACCCATATATTGTGCTTGTGTGCAAATG AAATTGGACAGTCAGAATCGCAGAAGCCTGACCTTTTTGAGTATAGGAATTTCTCGATAA ACGATGATGACAATGCAGACATTGGTGATCTCTTTCAAGATGGTTCTGATTTCATCAGTT ATGTGGATCACTTGCGTGGCAAAGTACTTGTGCATTGCTTTGAGGGAAAAAGTCGAAGTG CGACTGTTGTTCTTGCCTACCTGATGCTGAGGAAGTAAGACTGCACAGTAATTACTATAT CATCACTATCATGCTTCTCTGTTAAAACCAATAACTCACCACGACTAAAACAATCTATTA ACAGATTTACTATTTTTCATGTGATCTTAAGGTCTATCAACCCAGAATTGACATCTGTAA GGATAGGAAGATTGGAATTGCATCTTTCCTTATTTTTTATTGTTCTGGACGCAGTCATCA TCTCGTAATTTCCCCTTTTTCTCTTAAGAAACTGTACTCTCCTGGAAGCATGGAACATGC TGAAGAAGGTGCACCGACGCGCGCATCCCAATGATGGGTTTGCTAAGATCTTGCTGGATC TTGACAAGAAACTGCACGGGAAAATCTCCATGGAATGGCAACACAAGAGGCCTGCAATGA AAGTGTGTCCTATCTGTGGCAAGAATGCTGGTCTCAGCAGCAGTTCACTCAAGCTCCACT TGCAGAAGGCACACAAGAAGATATCCTCTGGGAGCGTAGACAGTGCAATGACTCTGGAGA TACAAAAAGCATTAGAGGCAATCAAAGCTGGCTGGGGCGGCAGTGACAGCCCAGTGCATA AATCACAATCACACATAGAAGGATTTTGACGTTTAATCTTACGTTCCTACGGTCCTATTA ATATATCAACAAGGCTGGTAGTCGGCGACCGCTTTAAGAGTGAAGCCTCAGCTCTAGACT TCATGACACTTGTAAGTAGCACATTTTTGGAACATTTGGTTTTTATTCTATAGTTCATGA GCTTGGAT