Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009161_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:40267887:40271679:-1 gene:Zm00001d009161 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	ATGGCGTCAACTAGCTCTATAGGCGACGTGGGAGCCTCAGATGCAAAATCACGTGTGGAG GATGTTTGGAAGAAGATGAATGGTGGCTTTCCTAATAAGATGCCCAAACCTGCAATGACG AAGCTCAGTTCAACAGCAACAGAAAAGAAAAATAAGCCAACAAATAATTGGATGACTGTT CTAGGCCTCTCACCAAGTAAGGCATGTAATTCCAGTCAAGGATCAAAAAATGGTCTAAAA TGGACACAACATGAAACGAGAGAGGATGCCAAAAAACTTGCAGCAAAGGCCCTTGCAGCT GCCAAAAATGCCGCTGCTGTGGCATCTGGACGAGGGAAAGTGGAGATCACTGAGGTAAGG GACTTTGCTGTCAAGGACATCGAAATCAAGAAATTGGTTGATCCTAATTCGAAGGAGGCA ATAGAGAAGGCCAAGGCAGCTGGTGCCGCCCCATCAGCTGTCGATAGCATTCTAGAGCAA ATACGGAAGAAGCAGAAGCTGAGCGTCCTGGACAAGACGAAGAAAGACTGGGGAGAGTAC AAGGAAGAAAACCGAGGCTTGGAGGAAGAGCTGGACGCCTACAAGAAGAGCTCGAACCAG TACCTCGACAAGCAATCATTCCTGCAGCGAACTGATTACCGCGAGTTTGAGCGCGAGCGG GATGCCCGGCTGTCCATGATGGCCAAACGGAGGACCGATATGCGGGAGGACGATGTGTAG

Peptide Sequence

PEP ID	Zm00001d009161_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:40267887:40271679:-1 gene:Zm00001d009161 transcript:Zm00001d009161_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	MASTSSIGDVGASDAKSRVEDVWKKMNGGFPNKMPKPAMTKLSSTATEKKNKPTNNWMTV LGLSPSKACNSSQGSKNGLKWTQHETREDAKKLAAKALAAAKNAAAVASGRGKVEITEVR DFAVKDIEIKKLVDPNSKEAIEKAKAAGAAPSAVDSILEQIRKKQKLSVLDKTKKDWGEY KEENRGLEEELDAYKKSSNQYLDKQSFLQRTDYREFERERDARLSMMAKRRTDMREDDV

Transcript Sequence

Transcript ID	Zm00001d009161_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:40267887:40271679:-1 gene:Zm00001d009161 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	GCTTCCGCCGGCCGAGTCCCGAGCGGAGCCGAAGCAACAACCGCCGGGGAGGCGAGGGAT TGATTCGGAGATGGCGTCAACTAGCTCTATAGGCGACGTGGGAGCCTCAGATGCAAAATC ACGTGTGGAGGATGTTTGGAAGAAGATGAATGGTGGCTTTCCTAATAAGATGCCCAAACC TGCAATGACGAAGCTCAGTTCAACAGCAACAGAAAAGAAAAATAAGCCAACAAATAATTG GATGACTGTTCTAGGCCTCTCACCAAGTAAGGCATGTAATTCCAGTCAAGGATCAAAAAA TGGTCTAAAATGGACACAACATGAAACGAGAGAGGATGCCAAAAAACTTGCAGCAAAGGC CCTTGCAGCTGCCAAAAATGCCGCTGCTGTGGCATCTGGACGAGGGAAAGTGGAGATCAC TGAGGTAAGGGACTTTGCTGTCAAGGACATCGAAATCAAGAAATTGGTTGATCCTAATTC GAAGGAGGCAATAGAGAAGGCCAAGGCAGCTGGTGCCGCCCCATCAGCTGTCGATAGCAT TCTAGAGCAAATACGGAAGAAGCAGAAGCTGAGCGTCCTGGACAAGACGAAGAAAGACTG GGGAGAGTACAAGGAAGAAAACCGAGGCTTGGAGGAAGAGCTGGACGCCTACAAGAAGAG CTCGAACCAGTACCTCGACAAGCAATCATTCCTGCAGCGAACTGATTACCGCGAGTTTGA GCGCGAGCGGGATGCCCGGCTGTCCATGATGGCCAAACGGAGGACCGATATGCGGGAGGA CGATGTGTAGGACTGAAATATATCCCTTCCTGTGGACATTCTTTTTCTTTTGAGATAGTG GTAAACACTAAGGGCCTGTTCGGTTCGGTCTCAATTCATATGGATTGAGTGAGATTGTGT CGGTTTACATCCATAACAAGTCAAAATTCGTCTAGATCCTACCCAATATATTCCAATTCA CATGGATCTAGAATAACCGAAGAAGGCCTAAATTGTCAATGTTTTCTGGTCCATTTAAAT CTACCTTTTT