Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009060_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:33883212:33886114:1 gene:Zm00001d009060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 5
Sequence	ATGCCTCTTGCCGCAATGGCGTCGGCATCCTCCTCGCCCTGCTCGCGGCATCCTCTGATC TTGGTCGTTCTCTTGTGCGCCATTGCCGCCATCTCTTTCTCTTCCTCTGTGGCTGCTGGA ACCGTTGGCGGCGGCACAGGCGGACTGGGCCCCATCAGCACCAACGGGAAGAACTACACC AAGGTGTGCGACCCCGCACGGTTCGTGGCGCTGGGGCTCGACATGTCACGCTTCCGGTAC TGCGACGCGTCGTTGCCGTACGCCGACCGGGTGCGCGACCTCGTGGGCCGCCTCGCGCTG GAGGAGAAGGTGCGCAACCTCGGGGACCAGGCGGAGGGCGCGCCCCGCGTCGGCCTGCCG CCGTACAAGTGGTGGGGGGAGGCCCTCCACGGCGTGTCCGACGTCGGCCCCGGCGGCACG TGGTTCGGCGACGTGGTGCCCGGCGCCACCAGCTTCCCGCTCGTCATCAACAGCGCCGCG GCGTTCAACGAGTCGCTGTGGCGCGCCATCGGCGGCGTGGTGTCCACGGAGATCAGGGCC ATGTACAACCTGGGCCACGCAGAGCTCACCTACTGGAGCCCCAACATCAACGTGGTGCGC GACCCGCGGTGGGGACGCGCCAGCGAGACCCCCGGCGAGGACCCCTTCGTCGTCGGCCGC TACGCCGTCAACTTCGTCCGCGGAATGCAGGACGTCGACGACCGCCCCTACGCCGCCGCC GCAGACCCGTTCTCGCGGCCCATCAAGGTGTCCAGCTGCTGCAAGCACTTCGCCGCCTAC GACGTGGACGCGTGGTTCAAGGCCGACCGCCTCACGTTCGACGCGCAGGTGGAGGAGCGC GACATGGTCGAGACCTTCGAGCGCCCCTTCGAGATGTGCATCCGGGACGGCGACGCCAGC TGCGTCATGTGCTCCTACAACCGCATCAACGGGATACCCGCCTGCGCCGACGCGCGCCTG CTGTCGGAGACCGTCCGGAGCCAGTGGCAGCTCCACGGGTACATCGTCTCTGACTGCGAC TCCGTACGCGTCATGGTCCGGGACGCCAAGTGGCTCAACTACACCGGCGTCGAGGCCACC GCCGCGGCCATGAAGGCCGGGCTCGACCTCGACTGCGGCATGTTCTGGGAGGGCGCCCGG GACTTCTTCACCACCGACAACGCGCTCAGCAACGTCTACACCACCCTGATGCGGCTCGGC TTCTTCGACGGCATGCCGGAATTCGAGTCCCTCGGCGCTAGCAACGTTTGCACCGACGGC CACAAGGAGCTGGCTGCCGACGCCGCAAGGCAGGGGATGGTCCTCCTCAAGAACGATGCC CGCCGCCTACCATTGGACCCCAACAAGATTAATTCAGTGTCGTTGGTTGGCCTGTTGGAG CACATCAATGCCACGGATGTCATGCTGGGAGACTACCGAGGTAAGCCATGCAGAATTGTG ACACCATACAACGCTATCAGGAACATGGTGAATGCCACGTACGTGCACGCCTGCGACAGT GGGGCGTGTAACACGGCGGAAGGGATGGGAAGAGCATCCAGCACAGCAAAGATCGCCGAC GCGACCATCGTCATCGCTGGTCTGAACATGAGCGTGGAGAGGGAGAGCAACGACAGGGAG GATCTCCTGCTGCCGTGGAACCAGAGCAGCTGGATCAATGCCGTCGCCATGGCCTCGCCC ACACCGATCGTCCTGGTGATCATGTCGGCCGGCGGCGTGGACGTCTCGTTTGCGCACAAC AACACCAAGATCGGCGCCATCGTTTGGGCCGGGTACCCCGGCGAGGAAGGCGGCACGGCC ATCGCCGACGTCCTCTTCGGAAAATACAATCCAGGTACGTTCATCAAATCTTGGAAATGA

Peptide Sequence

PEP ID	Zm00001d009060_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:33883212:33886114:1 gene:Zm00001d009060 transcript:Zm00001d009060_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 5
Sequence	MPLAAMASASSSPCSRHPLILVVLLCAIAAISFSSSVAAGTVGGGTGGLGPISTNGKNYT KVCDPARFVALGLDMSRFRYCDASLPYADRVRDLVGRLALEEKVRNLGDQAEGAPRVGLP PYKWWGEALHGVSDVGPGGTWFGDVVPGATSFPLVINSAAAFNESLWRAIGGVVSTEIRA MYNLGHAELTYWSPNINVVRDPRWGRASETPGEDPFVVGRYAVNFVRGMQDVDDRPYAAA ADPFSRPIKVSSCCKHFAAYDVDAWFKADRLTFDAQVEERDMVETFERPFEMCIRDGDAS CVMCSYNRINGIPACADARLLSETVRSQWQLHGYIVSDCDSVRVMVRDAKWLNYTGVEAT AAAMKAGLDLDCGMFWEGARDFFTTDNALSNVYTTLMRLGFFDGMPEFESLGASNVCTDG HKELAADAARQGMVLLKNDARRLPLDPNKINSVSLVGLLEHINATDVMLGDYRGKPCRIV TPYNAIRNMVNATYVHACDSGACNTAEGMGRASSTAKIADATIVIAGLNMSVERESNDRE DLLLPWNQSSWINAVAMASPTPIVLVIMSAGGVDVSFAHNNTKIGAIVWAGYPGEEGGTA IADVLFGKYNPGTFIKSWK

Transcript Sequence

Transcript ID	Zm00001d009060_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:33883212:33886114:1 gene:Zm00001d009060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 5
Sequence	GCTTCGTCCACAGCCCAACTACCCAAGAGCAGAGGGCAGAGGATGCCTCTTGCCGCAATG GCGTCGGCATCCTCCTCGCCCTGCTCGCGGCATCCTCTGATCTTGGTCGTTCTCTTGTGC GCCATTGCCGCCATCTCTTTCTCTTCCTCTGTGGCTGCTGGAACCGTTGGCGGCGGCACA GGCGGACTGGGCCCCATCAGCACCAACGGGAAGAACTACACCAAGGTGTGCGACCCCGCA CGGTTCGTGGCGCTGGGGCTCGACATGTCACGCTTCCGGTACTGCGACGCGTCGTTGCCG TACGCCGACCGGGTGCGCGACCTCGTGGGCCGCCTCGCGCTGGAGGAGAAGGTGCGCAAC CTCGGGGACCAGGCGGAGGGCGCGCCCCGCGTCGGCCTGCCGCCGTACAAGTGGTGGGGG GAGGCCCTCCACGGCGTGTCCGACGTCGGCCCCGGCGGCACGTGGTTCGGCGACGTGGTG CCCGGCGCCACCAGCTTCCCGCTCGTCATCAACAGCGCCGCGGCGTTCAACGAGTCGCTG TGGCGCGCCATCGGCGGCGTGGTGTCCACGGAGATCAGGGCCATGTACAACCTGGGCCAC GCAGAGCTCACCTACTGGAGCCCCAACATCAACGTGGTGCGCGACCCGCGGTGGGGACGC GCCAGCGAGACCCCCGGCGAGGACCCCTTCGTCGTCGGCCGCTACGCCGTCAACTTCGTC CGCGGAATGCAGGACGTCGACGACCGCCCCTACGCCGCCGCCGCAGACCCGTTCTCGCGG CCCATCAAGGTGTCCAGCTGCTGCAAGCACTTCGCCGCCTACGACGTGGACGCGTGGTTC AAGGCCGACCGCCTCACGTTCGACGCGCAGGTGGAGGAGCGCGACATGGTCGAGACCTTC GAGCGCCCCTTCGAGATGTGCATCCGGGACGGCGACGCCAGCTGCGTCATGTGCTCCTAC AACCGCATCAACGGGATACCCGCCTGCGCCGACGCGCGCCTGCTGTCGGAGACCGTCCGG AGCCAGTGGCAGCTCCACGGGTACATCGTCTCTGACTGCGACTCCGTACGCGTCATGGTC CGGGACGCCAAGTGGCTCAACTACACCGGCGTCGAGGCCACCGCCGCGGCCATGAAGGCC GGGCTCGACCTCGACTGCGGCATGTTCTGGGAGGGCGCCCGGGACTTCTTCACCACCGAC AACGCGCTCAGCAACGTCTACACCACCCTGATGCGGCTCGGCTTCTTCGACGGCATGCCG GAATTCGAGTCCCTCGGCGCTAGCAACGTTTGCACCGACGGCCACAAGGAGCTGGCTGCC GACGCCGCAAGGCAGGGGATGGTCCTCCTCAAGAACGATGCCCGCCGCCTACCATTGGAC CCCAACAAGATTAATTCAGTGTCGTTGGTTGGCCTGTTGGAGCACATCAATGCCACGGAT GTCATGCTGGGAGACTACCGAGGTAAGCCATGCAGAATTGTGACACCATACAACGCTATC AGGAACATGGTGAATGCCACGTACGTGCACGCCTGCGACAGTGGGGCGTGTAACACGGCG GAAGGGATGGGAAGAGCATCCAGCACAGCAAAGATCGCCGACGCGACCATCGTCATCGCT GGTCTGAACATGAGCGTGGAGAGGGAGAGCAACGACAGGGAGGATCTCCTGCTGCCGTGG AACCAGAGCAGCTGGATCAATGCCGTCGCCATGGCCTCGCCCACACCGATCGTCCTGGTG ATCATGTCGGCCGGCGGCGTGGACGTCTCGTTTGCGCACAACAACACCAAGATCGGCGCC ATCGTTTGGGCCGGGTACCCCGGCGAGGAAGGCGGCACGGCCATCGCCGACGTCCTCTTC GGAAAATACAATCCAGGTACGTTCATCAAATCTTGGAAATGAGATGTCCTTTTCACTGCG TCGGCTCGGCATACGCCTTATGATATCTCTCAATCTCAACCATGCACACCCTGGATCTCC ACTCCACAAACAGGAGGACGGCTGCCGCTGACATGGTTCAAGAACGAGTACGTCAACCAG ATCCCCATGACGTCCATGGCGCTGCGTCCCGACGCCGCGCTGGGCTACCCCGGCCGGACG TACAAGTTCTACGGCGGCCCGGCTGTGCTCTACCCGTTCGGCCACGGCCTCAGCTACACC AACTTCAGCTATGCTTCCGGCACCACCGGCGCCACTGTCACCATCCACATCGGCGCCTGG GAGCACTGCAAGATGCTCACCTACAAGATGGGTGCGCCGTCGCCGTCGCCAGCCTGCCCG GCCCTAAACGTCGCTAGCCACATGTGCAGCGAGGTGGTGAGCTTCAGCCTCAGGGTGGCG AACACCGGCGGTGTCGGCGGCGACCACGTGGTGCCAGTGTACACCGCGCCGCCTCCCGAG GTGGGCGACGCGCCGCTGAAGCAGCTGGTGGCGTTCCGGAGGGTGTTCGTGCCCGCCGGC GCCGCCGTCGACGTGCCCTTCGCCCTCAACGTGTGCAAGACGTTCGCGATCGTCGAGGAG ACGGCGTACACCGTCGTGCCGTCGGGCGTCAGCACGGTCGTCGTCGGAGATGACGCGCTG GTGTTGTCGTTCCCCGTCACGATCAACCTGGCAGTGTAGACTACTTGTCTGCAGGACTAG GCGTTAATTGATTCTTTTTTTTTACTCAAGGTAATAACTTTAAACCATTAAATGTAGCGG GCGAGAAAGTGGAAGCAAGTGTAATTACTTTACACAGTGCTATACAAAAGCAGAAGCAGA TCGATCCATTAATTG