Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009055_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:33490635:33496056:1 gene:Zm00001d009055 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	ATGACATCAGTAGGTCTACTATCATCAGGTTATGAAGCAAGTACCAGTGGAACCACTGAT CGATTGCCAGATGAGATGAACGGGATGAGCATAAGGGATGAAAAGGAAGTGGAAGCCGTT GTTGTCAATGGCAATGGGATGGAGGTTGGTCATACTATTGTGACGACTGTTGGTGGAAGA AATTCACAGCAGAGGCAGGCCAGGTGTCTGGAAACTGGTGAGAGAGTAGCTATAAAGAAA GTTCTTCAAGATGTGAGATACAAGAACCGTGAGCTGCAAACAATGCAAGTTCTTGATCAC CCAAATGTTGTATGCTTGAAGCATTACTTCTGCTCAACCACTGATAAGGAAGAGCTTTAC CTCAATTTGGTGCTTGAATATGTGCCAGAAACTGTTCACCGTGTTATTAAACATTACAAT AAGATGAACCAACGGATGCCATTGATTTATGTTAAACTTTATATGTATCAGATTTGTAGA GCTTTGGCTTACCTTCACAACTGCGTAGGAGTGTGCCACAGAGATATAAAGCCACAAAAT ATTCTGGTGAACCCACATACCCATCAGCTGAAGTTGTGTGACTTCGGCAGTGCCAAAGTC TTGGTACAAGGGGAACCAAATATTTCATATATTTGTTCTAGATACTACAGAGCCCCAGAG CTCATATTTGGGGCTACTGAGTATACAACAGCTATTGACGTGTGGTCTGCTGGTTGTGTA CTTGCTGAGCTTCTTCTAGGTCAGCCTGTTTTTCCTGGGGACAGTGGTGTCGATCAGCTT GTTGAAATTATTAAGGTTCTAGGTACTCCAACACGGGATGAAATTAAGCGCATGAATCCA AACTACACCGAATTTAAGTTTCCGCAAATCAAAGCTCACCCATGGCACAAAATCTTCCAC AAAAGAATGCCATCTGAAGCTGTAGATTTTGTGTCTCGGCTTCTGCAGTACTCACCAAAC CTCCGGTGCACAGCATTGGAGGCGTTAATCCATCCATTCTTTGATGAACTGCGGTACCCA AACTCACGTCTACCAAATGGCCGTTCCCTTCCCCATCTCTTCAATTTTAAACCTAATGAG TTGAGAGGAGTACCAGAGGAGTTTGTTGTGCAATTGATCCCTCAGCATGCTAAGAAGCAA TGTGCTTTCTTAGGAGTTTGA

Peptide Sequence

PEP ID	Zm00001d009055_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:33490635:33496056:1 gene:Zm00001d009055 transcript:Zm00001d009055_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	MTSVGLLSSGYEASTSGTTDRLPDEMNGMSIRDEKEVEAVVVNGNGMEVGHTIVTTVGGR NSQQRQARCLETGERVAIKKVLQDVRYKNRELQTMQVLDHPNVVCLKHYFCSTTDKEELY LNLVLEYVPETVHRVIKHYNKMNQRMPLIYVKLYMYQICRALAYLHNCVGVCHRDIKPQN ILVNPHTHQLKLCDFGSAKVLVQGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCV LAELLLGQPVFPGDSGVDQLVEIIKVLGTPTRDEIKRMNPNYTEFKFPQIKAHPWHKIFH KRMPSEAVDFVSRLLQYSPNLRCTALEALIHPFFDELRYPNSRLPNGRSLPHLFNFKPNE LRGVPEEFVVQLIPQHAKKQCAFLGV

Transcript Sequence

Transcript ID	Zm00001d009055_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:33490635:33496056:1 gene:Zm00001d009055 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	GGACAGCCCTGCCCCGCTTCCAATAACTGCGCCGCCGCCTCTGCTCCTCTGCTGCCCCTT CGAATCGGGCACCACAAGAGCAAGGGTGTAGATGGGAGAGCCCAACGGATTGGTATAGAA TCTTTTCCTCAACCCGTCGATTGTAGTTGCTCAGCACTAAGGAAATTCTCTGATCTGGTA GCAAGGAACTTGATCAATAGTACCTTCTGAGGCAATATGACATCAGTAGGTCTACTATCA TCAGGTTATGAAGCAAGTACCAGTGGAACCACTGATCGATTGCCAGATGAGATGAACGGG ATGAGCATAAGGGATGAAAAGGAAGTGGAAGCCGTTGTTGTCAATGGCAATGGGATGGAG GTTGGTCATACTATTGTGACGACTGTTGGTGGAAGAAATTCACAGCAGAGGCAGGCCAGG TGTCTGGAAACTGGTGAGAGAGTAGCTATAAAGAAAGTTCTTCAAGATGTGAGATACAAG AACCGTGAGCTGCAAACAATGCAAGTTCTTGATCACCCAAATGTTGTATGCTTGAAGCAT TACTTCTGCTCAACCACTGATAAGGAAGAGCTTTACCTCAATTTGGTGCTTGAATATGTG CCAGAAACTGTTCACCGTGTTATTAAACATTACAATAAGATGAACCAACGGATGCCATTG ATTTATGTTAAACTTTATATGTATCAGATTTGTAGAGCTTTGGCTTACCTTCACAACTGC GTAGGAGTGTGCCACAGAGATATAAAGCCACAAAATATTCTGGTGAACCCACATACCCAT CAGCTGAAGTTGTGTGACTTCGGCAGTGCCAAAGTCTTGGTACAAGGGGAACCAAATATT TCATATATTTGTTCTAGATACTACAGAGCCCCAGAGCTCATATTTGGGGCTACTGAGTAT ACAACAGCTATTGACGTGTGGTCTGCTGGTTGTGTACTTGCTGAGCTTCTTCTAGGTCAG CCTGTTTTTCCTGGGGACAGTGGTGTCGATCAGCTTGTTGAAATTATTAAGGTTCTAGGT ACTCCAACACGGGATGAAATTAAGCGCATGAATCCAAACTACACCGAATTTAAGTTTCCG CAAATCAAAGCTCACCCATGGCACAAAATCTTCCACAAAAGAATGCCATCTGAAGCTGTA GATTTTGTGTCTCGGCTTCTGCAGTACTCACCAAACCTCCGGTGCACAGCATTGGAGGCG TTAATCCATCCATTCTTTGATGAACTGCGGTACCCAAACTCACGTCTACCAAATGGCCGT TCCCTTCCCCATCTCTTCAATTTTAAACCTAATGAGTTGAGAGGAGTACCAGAGGAGTTT GTTGTGCAATTGATCCCTCAGCATGCTAAGAAGCAATGTGCTTTCTTAGGAGTTTGAGAA AGCAGTTCAATTTTATTCCAGAAAAGAAAAAAGAGAGAGGATGCAGCAGTTGAGAGGTTA CCTGAGTATTGATTACTTACGTTCTGTTTAACCGCACAGTAGCATTAGCCTACAGTATTA TCGACTAGGCAACGTGTGCTGTTATCTTTCACGACGGCTTTTACATCGCAATGTTCTACC ACGGTGGTGGGATCTTTTTCACCACATTCTGTAAAGCAGAAGAAGACGTAAATCGACTGG TCACCCGTTCTTGTGGTCTGTATATTGGTCTCCCCCAATCTTGAGAACACGTTCTTTTGT TTTTGGAGATGGATTCATTTCGTATCTGTATCACTATCACCAAATGAAACAAGAACTCAT GTATTCTTGAACTGGATTCAGTTACATGAGAGT