Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d009016_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:30232240:30236384:1 gene:Zm00001d009016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	ATGGCGGCGATTACCGCGCCGCCGGCCCCTCATCCGGCCTCCACCTCATGCCGCCGCCGC GCGCCACTCATCCGCTTCGCCGCCTCCTCGTCCCCGTCCTCCCGCTTCCGCCCATCCTCC TCCTCCTCCTTCCCGGGCGCAGCCGGCAGCAGCAGCGGCGGCGGGGGCGAGATCCTCCAC GTCTCGCCGCTTCCCCCGCCCGCCGCGCCCCCGGGGGCCCCCGTCTACGTCACGCTCCCA GCCGACGTCGTCGGCCCGGGGGGCCGCGTCGCGCGCCGCCGAGCCATGGGGGCCTCGCTC GCCGCCCTTGCCGCCGCCGGCGTCGCGGGCATCGCCGTCGAGCTCTGGTGGGGCGTCATC GAGCGCCACCGCCCCGGGGAGTACGACTGGGCCGGCTACCTCGAGCTCGCCGCCATGGCC CGACGCCACGGCCTCCGCGTGCGCGCCATCCTCGCCTTCCACCAGTGCGGCGCCGGACCA CATGACCCGCCCTGGATTCCTTTGCCACAATGGGTTCTTGAGGAGATGGATAAGGTTCCG GACCTGTCATATACCAATAGATACCAGAAGAGAAACAGAGAATACATATCACTGGGATGT GATATTCTTCCTGTTCTGAAAGGAAGATCACCTATGCAAGCTTACTCCGACTTCATGAGA AGCTTCCGCAATACTTTCGAAGATTACCTTGGGGCCATAGTAACAGAAGTTCAAGTTGGA ATGGGCCCAGGAGGTGAGCTTAGGTATCCATCATGCCCAACTGAGAAGCTAAATCAGCCA GGCAGTTCGTCTGAACTTGGAGAGTTTCAATGTTATGATAAGTTTATGCAAGCATCATTA AGTGCTCGTGCACAAATTTTTGGGTTACAAGAATGGGGTAATGATGGTTCAACTGGCACA GATGGTTCGCAGAAGAACCTTGAAGAAGCAAGTTTTTTTAGGCTTGATGGAGGATATTGG GATACACCTTATGGTCACTTTTTCCTTGAGTGGTATTCAGGAATGCTTCTTCTCCATGGA GAGAGGCTATGCATGATAGCTGATGCAATCTTCTCTGGTACTGGTGTGACCATCTCAGGG AAGGTTGCTGGCATACATTGGCACTACTATACTTGTTCACATCCATCTGAACTGACAGCT GGCTACTACAATACACTACTAAGAGATGGCTATCTTCCTATAGCTCAAATGTTTGCCAAA TACAAAGCTGCATTGTGCTGCAGTTGTTTCGACCTGAGGGACACAGAAAGAACAGATTCT GAGAGCAGCCCAGAAGGTACTCTCCGGCAGCTTGCGGGTGCTGCTAAAATGTGCGGCCTT CCTCTTAATGGTGAGAATTCTATGACAAGGCTGGATGATGCATCACTGAATCAAGTCATA AGAAGCTCAAGGCTATACTCAGGCCGTACTTCAGGAACATCCTTTTCCTTTAACTATGTT AGGATGAACAAAAGCTTGTTTGAATTTCACAATTGGAATCGATTTACAAAGTTTGTTAGG CAGATGTCAGATGCTAGGACCTTTCTAGCAAGACTGTATGTCAGGAGAGGGCAGCAATGC TTGTCTTCAATGTCGGTTGTTTGGGTGGTTAGTCGGGCTTGTGTATATACATGA

Peptide Sequence

PEP ID	Zm00001d009016_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:30232240:30236384:1 gene:Zm00001d009016 transcript:Zm00001d009016_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	MAAITAPPAPHPASTSCRRRAPLIRFAASSSPSSRFRPSSSSSFPGAAGSSSGGGGEILH VSPLPPPAAPPGAPVYVTLPADVVGPGGRVARRRAMGASLAALAAAGVAGIAVELWWGVI ERHRPGEYDWAGYLELAAMARRHGLRVRAILAFHQCGAGPHDPPWIPLPQWVLEEMDKVP DLSYTNRYQKRNREYISLGCDILPVLKGRSPMQAYSDFMRSFRNTFEDYLGAIVTEVQVG MGPGGELRYPSCPTEKLNQPGSSSELGEFQCYDKFMQASLSARAQIFGLQEWGNDGSTGT DGSQKNLEEASFFRLDGGYWDTPYGHFFLEWYSGMLLLHGERLCMIADAIFSGTGVTISG KVAGIHWHYYTCSHPSELTAGYYNTLLRDGYLPIAQMFAKYKAALCCSCFDLRDTERTDS ESSPEGTLRQLAGAAKMCGLPLNGENSMTRLDDASLNQVIRSSRLYSGRTSGTSFSFNYV RMNKSLFEFHNWNRFTKFVRQMSDARTFLARLYVRRGQQCLSSMSVVWVVSRACVYT

Transcript Sequence

Transcript ID	Zm00001d009016_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:30232240:30236384:1 gene:Zm00001d009016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	ACACACAGTTCCCTCAGCCTCTGGCGGCAGAGGCTGAGCCGGGGAGGCGCCTCCCTCTCC CCTCCCTCGCCTCCTACTCTCCTGTCTTTCTCCAATGGCGGCGATTACCGCGCCGCCGGC CCCTCATCCGGCCTCCACCTCATGCCGCCGCCGCGCGCCACTCATCCGCTTCGCCGCCTC CTCGTCCCCGTCCTCCCGCTTCCGCCCATCCTCCTCCTCCTCCTTCCCGGGCGCAGCCGG CAGCAGCAGCGGCGGCGGGGGCGAGATCCTCCACGTCTCGCCGCTTCCCCCGCCCGCCGC GCCCCCGGGGGCCCCCGTCTACGTCACGCTCCCAGCCGACGTCGTCGGCCCGGGGGGCCG CGTCGCGCGCCGCCGAGCCATGGGGGCCTCGCTCGCCGCCCTTGCCGCCGCCGGCGTCGC GGGCATCGCCGTCGAGCTCTGGTGGGGCGTCATCGAGCGCCACCGCCCCGGGGAGTACGA CTGGGCCGGCTACCTCGAGCTCGCCGCCATGGCCCGACGCCACGGCCTCCGCGTGCGCGC CATCCTCGCCTTCCACCAGTGCGGCGCCGGACCACATGACCCGCCCTGGATTCCTTTGCC ACAATGGGTTCTTGAGGAGATGGATAAGGTTCCGGACCTGTCATATACCAATAGATACCA GAAGAGAAACAGAGAATACATATCACTGGGATGTGATATTCTTCCTGTTCTGAAAGGAAG ATCACCTATGCAAGCTTACTCCGACTTCATGAGAAGCTTCCGCAATACTTTCGAAGATTA CCTTGGGGCCATAGTAACAGAAGTTCAAGTTGGAATGGGCCCAGGAGGTGAGCTTAGGTA TCCATCATGCCCAACTGAGAAGCTAAATCAGCCAGGCAGTTCGTCTGAACTTGGAGAGTT TCAATGTTATGATAAGTTTATGCAAGCATCATTAAGTGCTCGTGCACAAATTTTTGGGTT ACAAGAATGGGGTAATGATGGTTCAACTGGCACAGATGGTTCGCAGAAGAACCTTGAAGA AGCAAGTTTTTTTAGGCTTGATGGAGGATATTGGGATACACCTTATGGTCACTTTTTCCT TGAGTGGTATTCAGGAATGCTTCTTCTCCATGGAGAGAGGCTATGCATGATAGCTGATGC AATCTTCTCTGGTACTGGTGTGACCATCTCAGGGAAGGTTGCTGGCATACATTGGCACTA CTATACTTGTTCACATCCATCTGAACTGACAGCTGGCTACTACAATACACTACTAAGAGA TGGCTATCTTCCTATAGCTCAAATGTTTGCCAAATACAAAGCTGCATTGTGCTGCAGTTG TTTCGACCTGAGGGACACAGAAAGAACAGATTCTGAGAGCAGCCCAGAAGGTACTCTCCG GCAGCTTGCGGGTGCTGCTAAAATGTGCGGCCTTCCTCTTAATGGTGAGAATTCTATGAC AAGGCTGGATGATGCATCACTGAATCAAGTCATAAGAAGCTCAAGGCTATACTCAGGCCG TACTTCAGGAACATCCTTTTCCTTTAACTATGTTAGGATGAACAAAAGCTTGTTTGAATT TCACAATTGGAATCGATTTACAAAGTTTGTTAGGCAGATGTCAGATGCTAGGACCTTTCT AGCAAGACTGTATGTCAGGAGAGGGCAGCAATGCTTGTCTTCAATGTCGGTTGTTTGGGT GGTTAGTCGGGCTTGTGTATATACATGAAAGTTGTCGAAAGCTACTGGGGAAATCATGTG CTTGTAATCTCAGCAATCAATGATTCGACCACTGTGG