Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008960_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:27419899:27421644:-1 gene:Zm00001d008960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupredoxin superfamily protein
Sequence	ATGTCAGCGCCGCGGCAGCCGCTGTGCAAGCTCGCCACCGCCGTCCACCACCTCCTCCTC TGCTCGCTGGCGGCGCTTTCGGTCTCCGCGGATGCCAAGGTGCACCACCACACCTGGGAC ATCGCGTACCACTACAAGTCTCTCGACTGCGTCAACAAGCTGGCGGTGACCATCAACGGC GAGTCCCCGGGGCCGACCATCCGCGCCACGCAGGGCGACACCGTGGTGGTCACCGTGCGC AACAGTCTGGAGACAGAGAACACCGGCATTCACTGGCACGGCATCCGCCAGGTCGGCTCG CCGTGGGCCGACGGCACCGTCGGCGTCACGCAGTGTCCCATCCTCCCCGGCGACACCTTC ACCTACAGGTTCGTCGTCGACCGACCGGGCACCTACTTCTACCACGCCCACTATGGGATG CAGCGCGTGGCCGGGCTCGACGGCATGCTCGTCGTGTCGGTGCCCGACGGCGTCGCGGAG CCCTTCGCCTACGACGAGGACCGCACCGTGCTTCTCATGGACTGGTGGCACAAGAGCGTG TACGAGCAGGCCGTCGGGCTCGCGTCCGACCCGCTCGTCTTCGTCGGCGAGCCACAGTCC CTGCTCATCAACGGCCGGGGGGTGTTCGAGCCGTTCCACTGCTCGCGTGCTCCCAGCGCC AGCGGCTGCAGCAGCGCCCCCCGCCCTGCAGCAGGCTGCGCTCCGCCGGCGCTCTTCACC GCCGTCCCGGGGAAGACGTACCGCCTCCGCGTCGGCAGCCTCACGTCGCTGTCGGCGCTC AACTTCGCGATTGAGGGCCACTCCATGACGGTGGTGGAGGCCGACGGCCACTACGTGAGG CCCGTCGTCGTGGACAGCCTCTACATCTACTCCGGCGAGTCCTACTCCGTGCTGCTCACG GCCGACCAGGACCCGTCCCGGAACTACTGGGCCGCGTCCCACGTCGTGGCCCGGGAGCGC AACACGACGAGCGCCATGGCCATCCTCAGCTACGCCGGCAACGACCCGCGGGCGCCGCCG CCCACGCCGCGGCCGGAGGGACCCGCATGGGACGACGCGAGGCCCCGGCTGGAGCAGAGC AGGTCCCTCGCCGTCGCGCACCCGGACCACGTGGTGCCTGTGCCGCCCAGGCCCGACCGC GCGCTCCTCCTCCTCAACACGCAGAACCGGATCGGGGGTCACATCAGGTGGGCCATCAAC GGCGTCTCCCTCGCGTTCCCGGCGACGCCGTACCTCGTGTCCATCAAGAGAGGCCTGCGG GGCGCGTACGACGACCAGCGTCCCCCGCCGGACACGTACGACTACAGGAGCTACGACATC GCGTCGCCGCCGACGGCGAACGGGACGGTGGCCAGCAAGGTGTACCGCCTGGCGCTGGGG TCCGTGGTGGACGTGGTGCTGCAGAACACGGTGGCGCTGAACAACAAGAGCGAGACGCAC CCGTGGCACCTCCACGGCCACGACTTCTGGGTGCTGGCCTACGGCGACGACGGCAAGAAG TTCGACCCGGAGAGGGACACGAACAAGTTCAACCTGAGAGACCCCGTCATGAAGAACACG GTGGCGCTGCACCCGCGGGGGTGGACGGCGGTGAGGTTCGTGGCGGACAACCCCGGGGTG TGGCTGTTCCACTGCCACATCGAGGCGCACGTGTACATGGGCATGGGGTTGGTGTTCGAG GAGGGTGTTGACAAGGTCGGCCGTCTGCCCAAGTCCATCATGGGCTGCGGACGATCCAGG ACCTAG

Peptide Sequence

PEP ID	Zm00001d008960_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:27419899:27421644:-1 gene:Zm00001d008960 transcript:Zm00001d008960_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupredoxin superfamily protein
Sequence	MSAPRQPLCKLATAVHHLLLCSLAALSVSADAKVHHHTWDIAYHYKSLDCVNKLAVTING ESPGPTIRATQGDTVVVTVRNSLETENTGIHWHGIRQVGSPWADGTVGVTQCPILPGDTF TYRFVVDRPGTYFYHAHYGMQRVAGLDGMLVVSVPDGVAEPFAYDEDRTVLLMDWWHKSV YEQAVGLASDPLVFVGEPQSLLINGRGVFEPFHCSRAPSASGCSSAPRPAAGCAPPALFT AVPGKTYRLRVGSLTSLSALNFAIEGHSMTVVEADGHYVRPVVVDSLYIYSGESYSVLLT ADQDPSRNYWAASHVVARERNTTSAMAILSYAGNDPRAPPPTPRPEGPAWDDARPRLEQS RSLAVAHPDHVVPVPPRPDRALLLLNTQNRIGGHIRWAINGVSLAFPATPYLVSIKRGLR GAYDDQRPPPDTYDYRSYDIASPPTANGTVASKVYRLALGSVVDVVLQNTVALNNKSETH PWHLHGHDFWVLAYGDDGKKFDPERDTNKFNLRDPVMKNTVALHPRGWTAVRFVADNPGV WLFHCHIEAHVYMGMGLVFEEGVDKVGRLPKSIMGCGRSRT

Transcript Sequence

Transcript ID	Zm00001d008960_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:27419899:27421644:-1 gene:Zm00001d008960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupredoxin superfamily protein
Sequence	ATGTCAGCGCCGCGGCAGCCGCTGTGCAAGCTCGCCACCGCCGTCCACCACCTCCTCCTC TGCTCGCTGGCGGCGCTTTCGGTCTCCGCGGATGCCAAGGTGCACCACCACACCTGGGAC ATCGCGTACCACTACAAGTCTCTCGACTGCGTCAACAAGCTGGCGGTGACCATCAACGGC GAGTCCCCGGGGCCGACCATCCGCGCCACGCAGGGCGACACCGTGGTGGTCACCGTGCGC AACAGTCTGGAGACAGAGAACACCGGCATTCACTGGCACGGCATCCGCCAGGTCGGCTCG CCGTGGGCCGACGGCACCGTCGGCGTCACGCAGTGTCCCATCCTCCCCGGCGACACCTTC ACCTACAGGTTCGTCGTCGACCGACCGGGCACCTACTTCTACCACGCCCACTATGGGATG CAGCGCGTGGCCGGGCTCGACGGCATGCTCGTCGTGTCGGTGCCCGACGGCGTCGCGGAG CCCTTCGCCTACGACGAGGACCGCACCGTGCTTCTCATGGACTGGTGGCACAAGAGCGTG TACGAGCAGGCCGTCGGGCTCGCGTCCGACCCGCTCGTCTTCGTCGGCGAGCCACAGTCC CTGCTCATCAACGGCCGGGGGGTGTTCGAGCCGTTCCACTGCTCGCGTGCTCCCAGCGCC AGCGGCTGCAGCAGCGCCCCCCGCCCTGCAGCAGGCTGCGCTCCGCCGGCGCTCTTCACC GCCGTCCCGGGGAAGACGTACCGCCTCCGCGTCGGCAGCCTCACGTCGCTGTCGGCGCTC AACTTCGCGATTGAGGGCCACTCCATGACGGTGGTGGAGGCCGACGGCCACTACGTGAGG CCCGTCGTCGTGGACAGCCTCTACATCTACTCCGGCGAGTCCTACTCCGTGCTGCTCACG GCCGACCAGGACCCGTCCCGGAACTACTGGGCCGCGTCCCACGTCGTGGCCCGGGAGCGC AACACGACGAGCGCCATGGCCATCCTCAGCTACGCCGGCAACGACCCGCGGGCGCCGCCG CCCACGCCGCGGCCGGAGGGACCCGCATGGGACGACGCGAGGCCCCGGCTGGAGCAGAGC AGGTCCCTCGCCGTCGCGCACCCGGACCACGTGGTGCCTGTGCCGCCCAGGCCCGACCGC GCGCTCCTCCTCCTCAACACGCAGAACCGGATCGGGGGTCACATCAGGTGGGCCATCAAC GGCGTCTCCCTCGCGTTCCCGGCGACGCCGTACCTCGTGTCCATCAAGAGAGGCCTGCGG GGCGCGTACGACGACCAGCGTCCCCCGCCGGACACGTACGACTACAGGAGCTACGACATC GCGTCGCCGCCGACGGCGAACGGGACGGTGGCCAGCAAGGTGTACCGCCTGGCGCTGGGG TCCGTGGTGGACGTGGTGCTGCAGAACACGGTGGCGCTGAACAACAAGAGCGAGACGCAC CCGTGGCACCTCCACGGCCACGACTTCTGGGTGCTGGCCTACGGCGACGACGGCAAGAAG TTCGACCCGGAGAGGGACACGAACAAGTTCAACCTGAGAGACCCCGTCATGAAGAACACG GTGGCGCTGCACCCGCGGGGGTGGACGGCGGTGAGGTTCGTGGCGGACAACCCCGGGGTG TGGCTGTTCCACTGCCACATCGAGGCGCACGTGTACATGGGCATGGGGTTGGTGTTCGAG GAGGGTGTTGACAAGGTCGGCCGTCTGCCCAAGTCCATCATGGGCTGCGGACGATCCAGG ACCTAG