Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008893_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:24167978:24172518:-1 gene:Zm00001d008893 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	ATGGAGGCGCCGCCGGTACCGGAGCTCATGGATCTGGACGCGCCCCCTCCCGCCGCAGCC GACGCCGCAGCCGCGGCGCCGGTTCCCCCCGCCGTCAGCGACAAGAAGAAGGAAGGGGAA GGGGGAGACACTGTTACGGGTCACATCATCTCCACCACCATCGGTGGGAAGAACGGCGAG CCGAAGCGGACCATCAGTTACATGGCAGAACGTGTCGTGGGTACGGGCTCATTTGGGATC GTCTTCCAGGCTAAGTGTTTGGAGACTGGAGAGACCTTCGCCATTAAGAAGGTGCTGCAG GATCGGCGTTACAAGAACCGGGAGCTGCAACTTATGCGTGCCATGGAGCACCCCAACGTC ATCTGCCTGAAGCACTGCTTCTTCTCAACAACGAGCAGGGACGAGTTGTTTCTAAACCTT GTCATGGAATTTGTCCCCGAGACCCTGTACCGTGTCCTGAAGCACTACAGCAACGCGAAC CAGAGGATGCCTCTTATCTACGTCAAGCTCTACATGTATCAGCTTTTCAGAGGCCTAGCC TATATTCATAATGTACCAGGAGTCTGCCATAGGGATGTAAAGCCACAAAACGTTTTGGTT GATCCTCTCACCCACCAGGTCAAGCTCTGTGACTTTGGTAGCGCAAAAGTCCTGATTCCT GGTGAACCGAACATATCTTACATATGCTCTCGTTATTATCGTGCTCCAGAGCTCATATTT GGAGCGACGGAGTATACAACTTCAATAGACATATGGTCAGCTGGCTGTGTTCTAGCTGAG TTGCTTCTTGGTCAGCCACTGTTTCCGGGAGAGAGTGCTGTTGATCAGTTGGTAGAGATT ATCAAGGTTCTTGGTACTCCAACCCGTGAGGAGATACGATGCATGAATCCCAACTATACT GAGTTCAGGTTTCCTCAGATAAAGGCTCATCCGTGGCACAAGATTTTCCACAAGAGAATG CCTCCGGAAGCCATTGACCTTGCTTCCCGTCTCCTTCAGTATTCGCCAAGTCTTCGCTGC TCTGCTCTTGATGCATGCGCTCATCCCTTCTTTGATGAGCTCCGGGCGCCGAATGCACGT CTACCAAACGGCCGTCCATTCCCTCCGCTCTTTAACTTCAAACATGAGCTAGCAAATGCC TCCCCGGACCTCATCAACAGGCTTGTACCGGAGCAGATTAGACGGCAGAACGGTGTCAAC TTTGGGCATACCGGGAGCTAG

Peptide Sequence

PEP ID	Zm00001d008893_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:24167978:24172518:-1 gene:Zm00001d008893 transcript:Zm00001d008893_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	MEAPPVPELMDLDAPPPAAADAAAAAPVPPAVSDKKKEGEGGDTVTGHIISTTIGGKNGE PKRTISYMAERVVGTGSFGIVFQAKCLETGETFAIKKVLQDRRYKNRELQLMRAMEHPNV ICLKHCFFSTTSRDELFLNLVMEFVPETLYRVLKHYSNANQRMPLIYVKLYMYQLFRGLA YIHNVPGVCHRDVKPQNVLVDPLTHQVKLCDFGSAKVLIPGEPNISYICSRYYRAPELIF GATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYT EFRFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYSPSLRCSALDACAHPFFDELRAPNAR LPNGRPFPPLFNFKHELANASPDLINRLVPEQIRRQNGVNFGHTGS

Transcript Sequence

Transcript ID	Zm00001d008893_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:24167978:24172518:-1 gene:Zm00001d008893 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	GAGGCAGGCAGCGGCTGTCCCGAGCTGTCGAAAGCGAGGCGCGGCGGCAGTCCTCGCAGC AGGGCCGACCGGTCAAAAGCACTGCTGCTCCACACCACCCCCACCATCCCTTTCCCCAAC CCCCGAAGCCGAGCCAGCGAACCACCCCGCCCGCAGCCGCAAGCAAGCAGCCAAGCAGTG TGAACTGACCGTCCGTTCCGTCCAGCCCACCATGGAGGCGCCGCCGGTACCGGAGCTCAT GGATCTGGACGCGCCCCCTCCCGCCGCAGCCGACGCCGCAGCCGCGGCGCCGGTTCCCCC CGCCGTCAGCGACAAGAAGAAGGAAGGGGAAGGGGGAGACACTGTTACGGGTCACATCAT CTCCACCACCATCGGTGGGAAGAACGGCGAGCCGAAGCGGACCATCAGTTACATGGCAGA ACGTGTCGTGGGTACGGGCTCATTTGGGATCGTCTTCCAGGCTAAGTGTTTGGAGACTGG AGAGACCTTCGCCATTAAGAAGGTGCTGCAGGATCGGCGTTACAAGAACCGGGAGCTGCA ACTTATGCGTGCCATGGAGCACCCCAACGTCATCTGCCTGAAGCACTGCTTCTTCTCAAC AACGAGCAGGGACGAGTTGTTTCTAAACCTTGTCATGGAATTTGTCCCCGAGACCCTGTA CCGTGTCCTGAAGCACTACAGCAACGCGAACCAGAGGATGCCTCTTATCTACGTCAAGCT CTACATGTATCAGCTTTTCAGAGGCCTAGCCTATATTCATAATGTACCAGGAGTCTGCCA TAGGGATGTAAAGCCACAAAACGTTTTGGTTGATCCTCTCACCCACCAGGTCAAGCTCTG TGACTTTGGTAGCGCAAAAGTCCTGATTCCTGGTGAACCGAACATATCTTACATATGCTC TCGTTATTATCGTGCTCCAGAGCTCATATTTGGAGCGACGGAGTATACAACTTCAATAGA CATATGGTCAGCTGGCTGTGTTCTAGCTGAGTTGCTTCTTGGTCAGCCACTGTTTCCGGG AGAGAGTGCTGTTGATCAGTTGGTAGAGATTATCAAGGTTCTTGGTACTCCAACCCGTGA GGAGATACGATGCATGAATCCCAACTATACTGAGTTCAGGTTTCCTCAGATAAAGGCTCA TCCGTGGCACAAGATTTTCCACAAGAGAATGCCTCCGGAAGCCATTGACCTTGCTTCCCG TCTCCTTCAGTATTCGCCAAGTCTTCGCTGCTCTGCTCTTGATGCATGCGCTCATCCCTT CTTTGATGAGCTCCGGGCGCCGAATGCACGTCTACCAAACGGCCGTCCATTCCCTCCGCT CTTTAACTTCAAACATGAGCTAGCAAATGCCTCCCCGGACCTCATCAACAGGCTTGTACC GGAGCAGATTAGACGGCAGAACGGTGTCAACTTTGGGCATACCGGGAGCTAGGAGGGCAG GCGGCTGCCATGGTCAAGTTTTTGGTCTTGGTACCCCATGTGCAGGGCCGATTGCAGGTG ACGGTGATATTGCTGCACCATCTGGAGAGGAGGGGCTCAGCAGTACCTGAGAGAGCTGAA ACTATGTAAATTATCTGACCGCGAAGGAGTACGGCCAGTGTTAAGCCAGTAAACTGGCGC ATGTTGGTCCAGAGTAGTTAAGAATGTAGCAGGTGGAGACTGGTAAATGCCTAGGGTCGT TTTTAGTTGTTGTTACTAGTATTTTGTAATGTAATGTTCGTCGGTACTTCCCAGCAGTAG TGTAGCTGCTCATGTTTTGTTCGCCCGTCATGATGTAAATGATCATCACCCAACTGGAAC CCCTGTTATCTCGTTACATGCTTAGGCCTCTGATCGTTCCGTAGTTGCTGTGAT