Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008871_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:23386820:23390680:1 gene:Zm00001d008871 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35
Sequence

ATGAGTGCCTCCAGGCCGGATCACCGTCGCCGCCACCCGCCGTTCCTGCGGGACCTCTCG
TCCCCGATCTCCTCGTCGTTTCGCCTCCCACCGGCCTCGATGCGGCGAGAGGCGCAGGCC
TCCACCCCGCCGCCGCCTCCGCCGCTGCTCTCCCTCGACGACCTCTCCCACCTCTCCCCC
TCCAGGCAGCCGGCCACGCCTCCGCAGGCGACGACGACCCCCTCGCCTCAGCCCCCGCGT
GGAGCCGTTCTCTTCTCCTCGCCGCTGCGGTCCAACGGCTCGCCGGGGCCCTCGGCATGG
TGGACCCCCTCGAGGGAGGAGAATCCCAGGGAGGGATCACCGATGGATGGCGTCGTGCAG
TACCAGCAGCAGTCCCCGACGACGCCGTCGGGTCAGCAGTCACAGCAGCAGAAGGTAGCG
CTGATCACGCTGCCGCCCCCCAGGGAGGTGGCGCGGCCGGAGATGCCCAGAGATTCGGCT
CCGGCTGCTGGACGGGTCGACGAGGAGGAGTGGGTCACCGTTTTCGGATTTTTTCCTGGT
GATACTAACATGGTGCTGCGAGAATTTGAGAAGTGTGGGATAGTCTTGAGACATGTTCTT
GGTCCAAGGGATGCGAACTGGGTGCATATCTTGTATCAGAGCCGGCATGATGCGCAGAAA
GCGCTCGCCAAGCATGGGCAGCAGCTAAACAGTGTTCTTATCATTGGTGTGAAGCCAGTG
GATCCGTGGCAGCTGCAGTACCTGAACGAGAACACCAACGAGAACTACCAGGGGAGCGCT
ACAGCCACGTTCACATCGCAACCTGTAGCGCCAAGTGGATTTGCAACCAGGAATGCACTA
GCACCTCTACCTAGCAACACTCTGACGAATGGCAGCTGCAACGACAGCAACCTTGGCGCG
TCTGGGGCCGTTGCGTCGCCTACAAAATCTGTCCTGTCCAAAGTCATGGACTTGATGTTC
GGCCTTTAA

Peptide Sequence

PEP ID

Zm00001d008871_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:23386820:23390680:1 gene:Zm00001d008871 transcript:Zm00001d008871_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35
Sequence

MSASRPDHRRRHPPFLRDLSSPISSSFRLPPASMRREAQASTPPPPPPLLSLDDLSHLSP
SRQPATPPQATTTPSPQPPRGAVLFSSPLRSNGSPGPSAWWTPSREENPREGSPMDGVVQ
YQQQSPTTPSGQQSQQQKVALITLPPPREVARPEMPRDSAPAAGRVDEEEWVTVFGFFPG
DTNMVLREFEKCGIVLRHVLGPRDANWVHILYQSRHDAQKALAKHGQQLNSVLIIGVKPV
DPWQLQYLNENTNENYQGSATATFTSQPVAPSGFATRNALAPLPSNTLTNGSCNDSNLGA
SGAVASPTKSVLSKVMDLMFGL

Transcript Sequence

Transcript ID

Zm00001d008871_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:23386820:23390680:1 gene:Zm00001d008871 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35
Sequence

TCTTCACATTCACACACGTGAGGCTTCCAAAAACCCAAGGCGCACTCGGCAGTGGAACTC
CGCTTTCTCTTGCTAGGGTTTCAGCTCTCCGCCACCGTCATGAGTGCCTCCAGGCCGGAT
CACCGTCGCCGCCACCCGCCGTTCCTGCGGGACCTCTCGTCCCCGATCTCCTCGTCGTTT
CGCCTCCCACCGGCCTCGATGCGGCGAGAGGCGCAGGCCTCCACCCCGCCGCCGCCTCCG
CCGCTGCTCTCCCTCGACGACCTCTCCCACCTCTCCCCCTCCAGGCAGCCGGCCACGCCT
CCGCAGGCGACGACGACCCCCTCGCCTCAGCCCCCGCGTGGAGCCGTTCTCTTCTCCTCG
CCGCTGCGGTCCAACGGCTCGCCGGGGCCCTCGGCATGGTGGACCCCCTCGAGGGAGGAG
AATCCCAGGGAGGGATCACCGATGGATGGCGTCGTGCAGTACCAGCAGCAGTCCCCGACG
ACGCCGTCGGGTCAGCAGTCACAGCAGCAGAAGGTAGCGCTGATCACGCTGCCGCCCCCC
AGGGAGGTGGCGCGGCCGGAGATGCCCAGAGATTCGGCTCCGGCTGCTGGACGGGTCGAC
GAGGAGGAGTGGGTCACCGTTTTCGGATTTTTTCCTGGTGATACTAACATGGTGCTGCGA
GAATTTGAGAAGTGTGGGATAGTCTTGAGACATGTTCTTGGTCCAAGGGATGCGAACTGG
GTGCATATCTTGTATCAGAGCCGGCATGATGCGCAGAAAGCGCTCGCCAAGCATGGGCAG
CAGCTAAACAGTGTTCTTATCATTGGTGTGAAGCCAGTGGATCCGTGGCAGCTGCAGTAC
CTGAACGAGAACACCAACGAGAACTACCAGGGGAGCGCTACAGCCACGTTCACATCGCAA
CCTGTAGCGCCAAGTGGATTTGCAACCAGGAATGCACTAGCACCTCTACCTAGCAACACT
CTGACGAATGGCAGCTGCAACGACAGCAACCTTGGCGCGTCTGGGGCCGTTGCGTCGCCT
ACAAAATCTGTCCTGTCCAAAGTCATGGACTTGATGTTCGGCCTTTAAGTTGCGTTGCTC
ACCCAAATGGTGCCGGGTTTTTTTTTGAGGGGTTCCTTCTGGGAAAACTCTAGGCCAGAA
TGAGGTTCACTTATCGATGTTACGGTAAAAACGTTACGTGATCACCGTGGTTGAACCACT
GGGTGTCAATGCGACCGTTATATGATGCTGCGAGCTAGCATCGCGAAATTCAAACGGTTG
TATTGATGCGTTGCAAATCATGTCTGAAACGACGTCATGAACCTGACTTGTATTTTGTTG
GACATGTCACATGCCCACGACATTTATGAAGGATGTGAGCTTGGGGGCGCCAGCTATGCT
GTCTTCAAAAGTCAAATTGGAAATGGAATATGAATTGTTCCCC