Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008869_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:23362875:23368001:-1 gene:Zm00001d008869 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 52 description:Class III HD-Zip III protein HB8%3B Putative homeobox/bZIP/lipid-binding protein family
Sequence	ATGGTGACGGCCAAGGAGGCCGCGGCGGCGGCGGCGGCCATGGACGCCAGCAAGTACGTG CGGTACACGCCGGAGCAGGTGGAGGCGCTGGAGCGGCTCTACTACGAGTGCCCCAAGCCG AGCTCGCTGCGCCGCCAGCAGCTGGTCCGCGACTGCCCCGTCCTCGCCAGCGTCGACCCC AAGCAGATCAAGGTCTGGTTCCAGAACCGCAGGTGCCGGGAGAAGCAGCGGAAGGAGTCG TCCCGGCTGCAGGCGGTAAACCGGAAGCTGACGGCCATGAACAAGCTGCTCATGGAGGAG AACGACCGCCTGCAGAAGCAGGTCTCGCAGCTCGTCTACGAGAACGGCTACTACCGCCAG CAGACGCAGAGCGCGGGGCTGGCGACCACGGACACGAGCTGCGAGTCGGTCGTCACCAGC GGCCCCCAGAACGTGGCCGCGGTGCTGCCACAAGCCCAGCCGCGCGACGCGGGCCCTGCC GGGCTCATGTCCATAGCGGAGGAGACACTGACGGAGTTTCTGTCCAAGGCCACCGGCACC GCCGTCGAGTGGGTCCAGATGCCCGGGATGAAGCCTGGTCCGGATTCTATTGGAATCATT GCCATCTCGCATGGCTGCCCCGGTGTCGCCGCGCGAGCTTGCGGCCTCGTGGGCATGGAG CCTGCGAAAGTCGCTGAGGTCCTCAAGGACCGCCCGCTGTGGCTGCGAGACTGCCGATCC ATGGAAGTGGTGAACGTTCTCCCTGCCGGTACCAGTGGCACAGTCGAGCTTCTCTACATG CAGCTCTACGCCCCCACGACGCTCGCGCCAGCTCGCGACTTCTGGCTGCTGCGGTACACC TCCATTCTCGACGACGGAAGCTTAGTGGTATGCGAGAGATCACTCGGCGCCAACCAGGGC GGCCCAAGCATGCCTCTCGTCCAGCCTTTTGTCAGGGGCGAGATGCTTCCCAGTGGGTTC TTGGTCCGGCCTAGCGACGGCGGAGGCAGCGTCATACACATCGTTGATCACATGGACCTG GAGCCTTGGAGCGTGCCCGAAGTCGTTCGCCCACTGTACGAGTCGTCTGCGATGGTTGCT CAGAAGATGTCAATGGCGGCCTTGCGCTATCTCAGGCAGGTTGCTCACGAAGATACCGCC CATTCTGTGGTAACCGGCGGGTGGGGACGGCAGCCTGCTTCTCTACGGGCTCTGAGCCAG AAGCTCACCAGAGGGTTCAATGAAGCTCTCAATGGGCTCGCTGACGACGGGTGGTCTGTG GTCGGAAGTGACGGGGTGGACGATGTCTGCGTCTCTGTCAGTTCATCCCCGAGTAGAGTG GTCAGCTGCAATGCAACTTTCAGTAACGGACCTGTAGTCGGCACTGGCAGCAGCAGTGTG CTCTGCGCAAAGGCATCGATGCTGCTGCAGGACGTTTCTCCGCCAGAGCTCCTGCGCTTC ATGCGGGAGCAGCGGTCGCAGTGGGCCGACAGCAATCTAGACGCGTTCTTCGCTTCTGCG ATGAAACCGGATTTCTGCAGCTTGCCTATTCCTCCTCGCCTTGGAGGGTTTGGTGGCCAG GTCATACTTCCTCTAGCCCACACGTTTGACCCTGAAGAATTCCTCGAGGTTATAAAAGTA GGAAATGCCGGTAACTACCAAGACGCGCTCCTGCACCGTGATCTGTTTCTGTTGCAGATG TACAACGGGGTAGACGAGAACATGGCAGGCACTTGTTCAGAGCTCATCTTTGCCCCTATA GACGCATCGTTCAGCGACGACTCGCCACTGCTCCCATCCGGCTTTCGTATCATCCCGATC GACGCTCCTCTTGACACGTCCAGCCCCAAGTGCACGCTGGACCTTGCCTCCACCCTCGAA GCCGGAACTCCCAGAAGCAGGACAAGCGGGAGCGGCGGCCCTGGAACTGCCGCCGCCGCT TGTGCCGGCTCCAAGGCCGTGATGACGATCGTGTTCCAGTTTGCCTTCGAGAGCCATCTG CAGGACAGCGTCGCAGCCATGGCGAGGCAGTACGTGCGGAGCATCGTCGCGTCGGTCCAG AGGATCGCGCTGGCGCTCTCCTCCGCGCGCCTGGTCGTCCCTCATGGCAGCGGTGTCAGC CACGGTGCTCCTGCTGCTGGTCCGGAGGCAGCCACGCTTGCAAGATGGATCTGCCAGAGT TACAGGTTCCATTTCGGGGCTGAGCTTATCAAATCCGCAGACGGTAGCGGCTGTGGTGAA GCAGTGCTGAAAACTCTCTGGCACCATGCCGGCGCTATACTCTGCTGCTCTCTCAAGGCC TTGCCAGTGTTCACGTTCGCGAACCAGTCCGGGCTCGACATGCTGGAGACGACGCTGGTG GCGCTGCAGGACATCGCGCTGGAGAGAGTGTTCGACGACCAAGGGAGGAAGAACCTGTGC GCGGAGCTCCCCGGCGTCATGGAGCAGGGGTTCGCGTGCGTCCCCGGCGGGATGTGCGTG TCGGGCCTAGGCCGGCCGGTGTCGTACGAGAAGGCGCTGGCGTGGAAGGTGCTCGACGAC GGCAGCGGCGGCGTGCACTGCGTCTGCTTCATGTTCGTCAACTGGTCGTTTGTGTGA

Peptide Sequence

PEP ID	Zm00001d008869_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:23362875:23368001:-1 gene:Zm00001d008869 transcript:Zm00001d008869_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 52 description:Class III HD-Zip III protein HB8%3B Putative homeobox/bZIP/lipid-binding protein family
Sequence	MVTAKEAAAAAAAMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDP KQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQ QTQSAGLATTDTSCESVVTSGPQNVAAVLPQAQPRDAGPAGLMSIAEETLTEFLSKATGT AVEWVQMPGMKPGPDSIGIIAISHGCPGVAARACGLVGMEPAKVAEVLKDRPLWLRDCRS MEVVNVLPAGTSGTVELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLGANQG GPSMPLVQPFVRGEMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVA QKMSMAALRYLRQVAHEDTAHSVVTGGWGRQPASLRALSQKLTRGFNEALNGLADDGWSV VGSDGVDDVCVSVSSSPSRVVSCNATFSNGPVVGTGSSSVLCAKASMLLQDVSPPELLRF MREQRSQWADSNLDAFFASAMKPDFCSLPIPPRLGGFGGQVILPLAHTFDPEEFLEVIKV GNAGNYQDALLHRDLFLLQMYNGVDENMAGTCSELIFAPIDASFSDDSPLLPSGFRIIPI DAPLDTSSPKCTLDLASTLEAGTPRSRTSGSGGPGTAAAACAGSKAVMTIVFQFAFESHL QDSVAAMARQYVRSIVASVQRIALALSSARLVVPHGSGVSHGAPAAGPEAATLARWICQS YRFHFGAELIKSADGSGCGEAVLKTLWHHAGAILCCSLKALPVFTFANQSGLDMLETTLV ALQDIALERVFDDQGRKNLCAELPGVMEQGFACVPGGMCVSGLGRPVSYEKALAWKVLDD GSGGVHCVCFMFVNWSFV

Transcript Sequence

Transcript ID	Zm00001d008869_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:23362875:23368001:-1 gene:Zm00001d008869 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 52 description:Class III HD-Zip III protein HB8%3B Putative homeobox/bZIP/lipid-binding protein family
Sequence	GTTAGAGGAAAGCGGCACCGGTGCTCCGGCCATATGGCCTCTCGCCCCCTCCTCCTCCGC CCATGACCGACCCCACCCGGCCCGGCCCTATTCTTCTACTACTCCCTACTCCACGGCTAC GCCCACGCACATGCCTCCCACACCCTCATCACTTGCATTGAGCACCACGTCGTCGAGCTA TCTGAGCACAAGTGCTACTAAGCTAGTAGCCACCACCTGCTATAGGAGTATAGGCTATAG GCCTATAGCTACCAGAGCCGCCAGCTGCCAGAGCTGTAGCTCAGCTAGCTAGTAGGAGAG TAGGGGGTCGTCGTCTGGGTGTTGCTGGCCGCTCGATCGAGTACTCAGTTGTTGGCTGCT GTGCCATTGCGACGGCGGCCGGCGGGCCGGGGAGCGAGCGCGAGTCGGAGGCAGATGGTG ACGGCCAAGGAGGCCGCGGCGGCGGCGGCGGCCATGGACGCCAGCAAGTACGTGCGGTAC ACGCCGGAGCAGGTGGAGGCGCTGGAGCGGCTCTACTACGAGTGCCCCAAGCCGAGCTCG CTGCGCCGCCAGCAGCTGGTCCGCGACTGCCCCGTCCTCGCCAGCGTCGACCCCAAGCAG ATCAAGGTCTGGTTCCAGAACCGCAGGTGCCGGGAGAAGCAGCGGAAGGAGTCGTCCCGG CTGCAGGCGGTAAACCGGAAGCTGACGGCCATGAACAAGCTGCTCATGGAGGAGAACGAC CGCCTGCAGAAGCAGGTCTCGCAGCTCGTCTACGAGAACGGCTACTACCGCCAGCAGACG CAGAGCGCGGGGCTGGCGACCACGGACACGAGCTGCGAGTCGGTCGTCACCAGCGGCCCC CAGAACGTGGCCGCGGTGCTGCCACAAGCCCAGCCGCGCGACGCGGGCCCTGCCGGGCTC ATGTCCATAGCGGAGGAGACACTGACGGAGTTTCTGTCCAAGGCCACCGGCACCGCCGTC GAGTGGGTCCAGATGCCCGGGATGAAGCCTGGTCCGGATTCTATTGGAATCATTGCCATC TCGCATGGCTGCCCCGGTGTCGCCGCGCGAGCTTGCGGCCTCGTGGGCATGGAGCCTGCG AAAGTCGCTGAGGTCCTCAAGGACCGCCCGCTGTGGCTGCGAGACTGCCGATCCATGGAA GTGGTGAACGTTCTCCCTGCCGGTACCAGTGGCACAGTCGAGCTTCTCTACATGCAGCTC TACGCCCCCACGACGCTCGCGCCAGCTCGCGACTTCTGGCTGCTGCGGTACACCTCCATT CTCGACGACGGAAGCTTAGTGGTATGCGAGAGATCACTCGGCGCCAACCAGGGCGGCCCA AGCATGCCTCTCGTCCAGCCTTTTGTCAGGGGCGAGATGCTTCCCAGTGGGTTCTTGGTC CGGCCTAGCGACGGCGGAGGCAGCGTCATACACATCGTTGATCACATGGACCTGGAGCCT TGGAGCGTGCCCGAAGTCGTTCGCCCACTGTACGAGTCGTCTGCGATGGTTGCTCAGAAG ATGTCAATGGCGGCCTTGCGCTATCTCAGGCAGGTTGCTCACGAAGATACCGCCCATTCT GTGGTAACCGGCGGGTGGGGACGGCAGCCTGCTTCTCTACGGGCTCTGAGCCAGAAGCTC ACCAGAGGGTTCAATGAAGCTCTCAATGGGCTCGCTGACGACGGGTGGTCTGTGGTCGGA AGTGACGGGGTGGACGATGTCTGCGTCTCTGTCAGTTCATCCCCGAGTAGAGTGGTCAGC TGCAATGCAACTTTCAGTAACGGACCTGTAGTCGGCACTGGCAGCAGCAGTGTGCTCTGC GCAAAGGCATCGATGCTGCTGCAGGACGTTTCTCCGCCAGAGCTCCTGCGCTTCATGCGG GAGCAGCGGTCGCAGTGGGCCGACAGCAATCTAGACGCGTTCTTCGCTTCTGCGATGAAA CCGGATTTCTGCAGCTTGCCTATTCCTCCTCGCCTTGGAGGGTTTGGTGGCCAGGTCATA CTTCCTCTAGCCCACACGTTTGACCCTGAAGAATTCCTCGAGGTTATAAAAGTAGGAAAT GCCGGTAACTACCAAGACGCGCTCCTGCACCGTGATCTGTTTCTGTTGCAGATGTACAAC GGGGTAGACGAGAACATGGCAGGCACTTGTTCAGAGCTCATCTTTGCCCCTATAGACGCA TCGTTCAGCGACGACTCGCCACTGCTCCCATCCGGCTTTCGTATCATCCCGATCGACGCT CCTCTTGACACGTCCAGCCCCAAGTGCACGCTGGACCTTGCCTCCACCCTCGAAGCCGGA ACTCCCAGAAGCAGGACAAGCGGGAGCGGCGGCCCTGGAACTGCCGCCGCCGCTTGTGCC GGCTCCAAGGCCGTGATGACGATCGTGTTCCAGTTTGCCTTCGAGAGCCATCTGCAGGAC AGCGTCGCAGCCATGGCGAGGCAGTACGTGCGGAGCATCGTCGCGTCGGTCCAGAGGATC GCGCTGGCGCTCTCCTCCGCGCGCCTGGTCGTCCCTCATGGCAGCGGTGTCAGCCACGGT GCTCCTGCTGCTGGTCCGGAGGCAGCCACGCTTGCAAGATGGATCTGCCAGAGTTACAGG TTCCATTTCGGGGCTGAGCTTATCAAATCCGCAGACGGTAGCGGCTGTGGTGAAGCAGTG CTGAAAACTCTCTGGCACCATGCCGGCGCTATACTCTGCTGCTCTCTCAAGGCCTTGCCA GTGTTCACGTTCGCGAACCAGTCCGGGCTCGACATGCTGGAGACGACGCTGGTGGCGCTG CAGGACATCGCGCTGGAGAGAGTGTTCGACGACCAAGGGAGGAAGAACCTGTGCGCGGAG CTCCCCGGCGTCATGGAGCAGGGGTTCGCGTGCGTCCCCGGCGGGATGTGCGTGTCGGGC CTAGGCCGGCCGGTGTCGTACGAGAAGGCGCTGGCGTGGAAGGTGCTCGACGACGGCAGC GGCGGCGTGCACTGCGTCTGCTTCATGTTCGTCAACTGGTCGTTTGTGTGACGCGTCTGC TACCAGGTCCGTCGCGCTCAGGGGAAAATCAGTTGATCGGTGACGTGCTTGAGGGTACGT ACGTCTCAAATCGCCCTTTGGTTATTGGGATGTAAAATGGTTTCGGTTTTTTTTTTGTTT TTTTTTTGAAGAAAAATGTGAAATGGTAGAAGGAAGGACCTGAATAGCAGTATTGTACAC GGATGGATCGTGTGATGTCAAACAAGAATGACTTTTTGTTTGATGGTGAAGCTAGCATGG CCCCTCCTTTATGGTTTTGATTATTATAAATGGATTGCATAATTAT