Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008865_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:23215990:23221000:1 gene:Zm00001d008865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein translocase subunit SECA2 chloroplastic
Sequence

ATGCCAACCACAGCGCCACCGGTGGATGCAGAACCTCCCGAGTGCCCGGTGTGCCTCTCC
CCATTCGACGCGGCCTCCGTTGTGCCGCGCGTCCTCCCGTGCGGCCACTCCCTCTGCGGG
TCTTGCATCGCGGCCCTCCCGCCCGCCTCCGCGGCCGCAGGCGCCTCCTCCCTCCGCTGC
CCTCTCTGCTCCCAGTGCGTCCCCTACGCCCGCGCGCTCGGCCCCTCCTCCCTCCCCAAA
AACCTCGCCCTCCTCACTCTTCTCCCCTCCCCATCGCATGCTCTCAGCGCCGCCACCCTC
GTCACAGCGCCGCTTCCCCACCCCCATCCGCTCCACGCCGCCCACTCGCGCCTCCTTTCG
CGCTTCCGCCATGCCGTCCTCCCCGAGTCCGCCTCCCCGCTCGGTTCCGAGCCAAGCCCC
GTCCACCTCGCGTTCGGATCCCTCGGCTCCGACCTCGGCGCGCCCTGGTTCTGCGCGCGG
GGCCGCCCCGTGAGCCTCCTCCCGATCGAGACCCAACCAGTCCCCCCGACGAAGCAGGAA
GCCGAATTCTACCGGCCCAGCCACGCGACGCGGGTCCTCGCCGCGGTCGACGCGCTCAGC
GACGCGACCAAGGAGGAGCTGGCCGGTCTGATCGCCTCTTCCGCGAGGCTAGCACGGATG
GTGAGCAGGCTCTACGGTGTCTGGATGTCCCCTCACGCGCCGCCACTATGGATGGTCTCT
GAACGGCACCCACGTACGGTTTCCCAATTGTTGGAGGAGGAGATTATCAATAGAGAGGAG
ACGGTGGTGCGGGCCGGATTCCTTGTAATGGAGGCATGTGAAGTGATCATGGGGTTGCAC
AGCGAGGGGCTGGTGCTGGGGTGCCTCGGGCTGGACTGCTTCTGCCTCGATCGTTTTGGG
CACTGCATGCTTGATTTGAATCAGGCGTTGGCCTTGTGCCGGGGAGTCCAAGCTGGGGCT
AGCTCGAACAGTGTTCGAGCTTTCATCGCTCCAGAGGTGGCGGCAGTGCTAGGTGACACG
TTGCGGACGGAGGGTCGTGATTTTGATGGTTTGGTTGGCTGTACCTCGGATATCTGGTCG
TTGGGTTGTGTGTTCGTGGCACTTCTTACTAGGGATGAACAGCTTGTGCCTGTGGCAGGT
TGGAACTCTGAAGGACTGTATGATGATTGGGAGAAGGAAGTGGTTACAAGGCTTGATGCC
ACATTGCTTGGTACTATACTTGAACCATTGGCTGCAGTTATAGCATCGTGCTTGAGATAT
GATCCAAAATCCCGTCCAGAGATTGCTGATGTTTGGAAATGTATTAGAGGCTTGTTGACA
AAATTTGGTGATGTTACTTTAGCTCCTGATGATGATGTTGCAGCTCAGAAGAGTTTTAGA
TGTTTACTCCTTGGGGAGTTATCCTCCATGTTTGTTGATTCTGGTGCTGTTGAGTCAGAT
GATAAAACACAACTGTCTCGAGGAGCTGATGGCAACAGTTCGAATCAGGATCATGGAAGT
AATGATGGTTTCTTAAACAATAGCGGAAATGATTTGTCAGGAATCGATGGTCCACAGTCT
GTCGGAGTGTTTAAATCATCAACACTGCTTGCCCACCGTGATTGTGTAACAGGATTAGCT
GTTGGAGGTGGGTTCTTGTTTAGCTCTTCTTATGATAAAACTATCAATGTGTGGTCACTG
CAGGACTTCTCTCATGTGCATTGTTTGAAGGGTCATGAACACAAAATCACAGCAATAGTT
GTTGTTGACAATGATAGCCATTCTCTTTGTATAAGTGGAGACAGTGGCAGCGGAATTTTT
GTCTGGCGTGTGGATTCTACTCTGAAGGAAGAACCTTTGAATAAATGGTATGAACATAAC
GATTGGCTCTATCGAGGGGTTAACTGCTTGGCTGTCTCTGGAACTGGTTATCTTTACACT
GGTAGCAGAGACAAAACTATCAAGGCTTGGTCACTAGAGGATTATTCACTTCGCTGCACT
ATGACAGGTCATAAATCAACTGTGTCTTGCCTTGCAGTGGCCAGTGGTATTCTTTACAGT
GGAAGTTGGGATGGTACCATTCGTTTATGGTGGCTCACTGATCATACACCATTGTCTGTC
CTGGAAGATGATGCAGCAGGAAGCATAGCCCCTGTATTGTCGATTTCAGCAGGAACCAAT
TTTGTTGCCTCGTCATATGAGAATGGCTATTTTAAGGTCTGGAAGAACGATGTGCTTGTC
AAATCAGAAAAGCTTCAAAATGGTGCTGTTTATGCAGTTAAATTGAGTGGCAAATGGCTC
TATACTGGTGGATGGGATAAAGTCATAAACATCCAGGAGTTGTTGGATGATGAGTCAGAG
GTAGAACTCCGAGACGTCGCTTCCATTACTTGCGACTCAATTATAACTTCGATACTGCCC
TGGGATGAAAGGCTGATAGTTGGACTATCCAACAGGGAAATAAAGAAGCTGGCTGAAAAG
CTGAGCGTTTGGCAGTCCGCAGCAGCTTTTGGTGGCCAGAAGCTGTCAGAAGCCGAAACA
AACAGGGCCTAG

Peptide Sequence

PEP ID

Zm00001d008865_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:23215990:23221000:1 gene:Zm00001d008865 transcript:Zm00001d008865_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein translocase subunit SECA2 chloroplastic
Sequence

MPTTAPPVDAEPPECPVCLSPFDAASVVPRVLPCGHSLCGSCIAALPPASAAAGASSLRC
PLCSQCVPYARALGPSSLPKNLALLTLLPSPSHALSAATLVTAPLPHPHPLHAAHSRLLS
RFRHAVLPESASPLGSEPSPVHLAFGSLGSDLGAPWFCARGRPVSLLPIETQPVPPTKQE
AEFYRPSHATRVLAAVDALSDATKEELAGLIASSARLARMVSRLYGVWMSPHAPPLWMVS
ERHPRTVSQLLEEEIINREETVVRAGFLVMEACEVIMGLHSEGLVLGCLGLDCFCLDRFG
HCMLDLNQALALCRGVQAGASSNSVRAFIAPEVAAVLGDTLRTEGRDFDGLVGCTSDIWS
LGCVFVALLTRDEQLVPVAGWNSEGLYDDWEKEVVTRLDATLLGTILEPLAAVIASCLRY
DPKSRPEIADVWKCIRGLLTKFGDVTLAPDDDVAAQKSFRCLLLGELSSMFVDSGAVESD
DKTQLSRGADGNSSNQDHGSNDGFLNNSGNDLSGIDGPQSVGVFKSSTLLAHRDCVTGLA
VGGGFLFSSSYDKTINVWSLQDFSHVHCLKGHEHKITAIVVVDNDSHSLCISGDSGSGIF
VWRVDSTLKEEPLNKWYEHNDWLYRGVNCLAVSGTGYLYTGSRDKTIKAWSLEDYSLRCT
MTGHKSTVSCLAVASGILYSGSWDGTIRLWWLTDHTPLSVLEDDAAGSIAPVLSISAGTN
FVASSYENGYFKVWKNDVLVKSEKLQNGAVYAVKLSGKWLYTGGWDKVINIQELLDDESE
VELRDVASITCDSIITSILPWDERLIVGLSNREIKKLAEKLSVWQSAAAFGGQKLSEAET
NRA

Transcript Sequence

Transcript ID

Zm00001d008865_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:23215990:23221000:1 gene:Zm00001d008865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein translocase subunit SECA2 chloroplastic
Sequence

GCCCGGCTTCCAGTCTCGCCGATTCGAGGAGACGACGACCATGCCAACCACAGCGCCACC
GGTGGATGCAGAACCTCCCGAGTGCCCGGTGTGCCTCTCCCCATTCGACGCGGCCTCCGT
TGTGCCGCGCGTCCTCCCGTGCGGCCACTCCCTCTGCGGGTCTTGCATCGCGGCCCTCCC
GCCCGCCTCCGCGGCCGCAGGCGCCTCCTCCCTCCGCTGCCCTCTCTGCTCCCAGTGCGT
CCCCTACGCCCGCGCGCTCGGCCCCTCCTCCCTCCCCAAAAACCTCGCCCTCCTCACTCT
TCTCCCCTCCCCATCGCATGCTCTCAGCGCCGCCACCCTCGTCACAGCGCCGCTTCCCCA
CCCCCATCCGCTCCACGCCGCCCACTCGCGCCTCCTTTCGCGCTTCCGCCATGCCGTCCT
CCCCGAGTCCGCCTCCCCGCTCGGTTCCGAGCCAAGCCCCGTCCACCTCGCGTTCGGATC
CCTCGGCTCCGACCTCGGCGCGCCCTGGTTCTGCGCGCGGGGCCGCCCCGTGAGCCTCCT
CCCGATCGAGACCCAACCAGTCCCCCCGACGAAGCAGGAAGCCGAATTCTACCGGCCCAG
CCACGCGACGCGGGTCCTCGCCGCGGTCGACGCGCTCAGCGACGCGACCAAGGAGGAGCT
GGCCGGTCTGATCGCCTCTTCCGCGAGGCTAGCACGGATGGTGAGCAGGCTCTACGGTGT
CTGGATGTCCCCTCACGCGCCGCCACTATGGATGGTCTCTGAACGGCACCCACGTACGGT
TTCCCAATTGTTGGAGGAGGAGATTATCAATAGAGAGGAGACGGTGGTGCGGGCCGGATT
CCTTGTAATGGAGGCATGTGAAGTGATCATGGGGTTGCACAGCGAGGGGCTGGTGCTGGG
GTGCCTCGGGCTGGACTGCTTCTGCCTCGATCGTTTTGGGCACTGCATGCTTGATTTGAA
TCAGGCGTTGGCCTTGTGCCGGGGAGTCCAAGCTGGGGCTAGCTCGAACAGTGTTCGAGC
TTTCATCGCTCCAGAGGTGGCGGCAGTGCTAGGTGACACGTTGCGGACGGAGGGTCGTGA
TTTTGATGGTTTGGTTGGCTGTACCTCGGATATCTGGTCGTTGGGTTGTGTGTTCGTGGC
ACTTCTTACTAGGGATGAACAGCTTGTGCCTGTGGCAGGTTGGAACTCTGAAGGACTGTA
TGATGATTGGGAGAAGGAAGTGGTTACAAGGCTTGATGCCACATTGCTTGGTACTATACT
TGAACCATTGGCTGCAGTTATAGCATCGTGCTTGAGATATGATCCAAAATCCCGTCCAGA
GATTGCTGATGTTTGGAAATGTATTAGAGGCTTGTTGACAAAATTTGGTGATGTTACTTT
AGCTCCTGATGATGATGTTGCAGCTCAGAAGAGTTTTAGATGTTTACTCCTTGGGGAGTT
ATCCTCCATGTTTGTTGATTCTGGTGCTGTTGAGTCAGATGATAAAACACAACTGTCTCG
AGGAGCTGATGGCAACAGTTCGAATCAGGATCATGGAAGTAATGATGGTTTCTTAAACAA
TAGCGGAAATGATTTGTCAGGAATCGATGGTCCACAGTCTGTCGGAGTGTTTAAATCATC
AACACTGCTTGCCCACCGTGATTGTGTAACAGGATTAGCTGTTGGAGGTGGGTTCTTGTT
TAGCTCTTCTTATGATAAAACTATCAATGTGTGGTCACTGCAGGACTTCTCTCATGTGCA
TTGTTTGAAGGGTCATGAACACAAAATCACAGCAATAGTTGTTGTTGACAATGATAGCCA
TTCTCTTTGTATAAGTGGAGACAGTGGCAGCGGAATTTTTGTCTGGCGTGTGGATTCTAC
TCTGAAGGAAGAACCTTTGAATAAATGGTATGAACATAACGATTGGCTCTATCGAGGGGT
TAACTGCTTGGCTGTCTCTGGAACTGGTTATCTTTACACTGGTAGCAGAGACAAAACTAT
CAAGGCTTGGTCACTAGAGGATTATTCACTTCGCTGCACTATGACAGGTCATAAATCAAC
TGTGTCTTGCCTTGCAGTGGCCAGTGGTATTCTTTACAGTGGAAGTTGGGATGGTACCAT
TCGTTTATGGTGGCTCACTGATCATACACCATTGTCTGTCCTGGAAGATGATGCAGCAGG
AAGCATAGCCCCTGTATTGTCGATTTCAGCAGGAACCAATTTTGTTGCCTCGTCATATGA
GAATGGCTATTTTAAGGTCTGGAAGAACGATGTGCTTGTCAAATCAGAAAAGCTTCAAAA
TGGTGCTGTTTATGCAGTTAAATTGAGTGGCAAATGGCTCTATACTGGTGGATGGGATAA
AGTCATAAACATCCAGGAGTTGTTGGATGATGAGTCAGAGGTAGAACTCCGAGACGTCGC
TTCCATTACTTGCGACTCAATTATAACTTCGATACTGCCCTGGGATGAAAGGCTGATAGT
TGGACTATCCAACAGGGAAATAAAGAAGCTGGCTGAAAAGCTGAGCGTTTGGCAGTCCGC
AGCAGCTTTTGGTGGCCAGAAGCTGTCAGAAGCCGAAACAAACAGGGCCTAGGTGTCGCA
ATGGCCCTAGGCCAAAAACAAACTCTGTTTTCGTGGGAACTGGTGCCTTGAAGACTCTCC
GTTTGAAGCATCGATGTGTAAGACTCTCTTCAACGGTGGACGCTAGCGCCCCCTCCCCTC
TCTGTGACGGCTACAGGCCTCCCTCTACCGCTCCCTCTACCGCTACAACGGTGCCCCCTA
GCACTGCTACAGTGCTAGCGGCTGGTGGGTGCGCACCCTACATCAAGGGATACCACAAGG
GCTCCCCTTGTCTCGGTTTGTGTGTACAAAAGTATTTATTAGTTGGGAAAAAATTGATAA
TAGATGGTGAATAGGTATGGAAAATAGTATTTTATGATTATAGTGGAGTATAGGGGAAGT
ATTTAGGGGGAACCGCTGTACAGGGTGGAGATATAGGGGGAAGAGAATACTGACGTGGCA
GTGGGATATAGGGGGAGAAATTTAGGGTTAACCGCTGAAGACAGTCTAAAGCCTATGCCA
GAGGCGTCTCCTAGAAGGAGAGTACCAACATCTTGCTGCAGCCGCATACTCGCATACAAA
TTACCAAAGTAGTTGTAGCAGTAGCAGACTAGGACTCTGTTTATGGTACTGGTAACTTGG
TTGTGGTAATTATTTGAGTATCTGTGTGATTAACAATAT