Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008846_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:8:22494443:22499822:1 gene:Zm00001d008846 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutaminyl-tRNA synthetase

Sequence

ATGGGCACCGGGGGAGACGGGAGCAAGGCGGGCCCGGCGCTGCCGCTCGAGGCGCTGCTG
GCGCTCGGCCTCGACCAGCGCACCGCCGAGAACGCGCTCGTCAACGCCAAGGTCACCGCC
AACCTCGCCTCCGTCATAGCCGAGGCTGGTATAAAGGAATGCGACAAGTCAGTCGGCAAT
CTTCTGTATGCAGTCGCCACCAAGTACCCAACTAATGCACTTGTTCACCGTCCTGTCCTT
ATTAGCTATGTCTTGTCAACAAAGATAAAGAACCCCGCACAGCTAGATGCTGCTCTGTCA
TTTCTTACTAATACTGGTCCTGATTCTCTAGATGTGGTCAAATTTGAAGAAGCATGTGGT
GTAGGTGTGGTTGTTTCTATTGAGGAAATTAAATCTACTGTTACTGATGTGCTTGAGGAG
AATATGGAAGCTATAAAGGAGCAGCGATATCACATAAATGTTGGTACACTATGCGGACAG
GTCAGGAAGAGACACCCCTGGGGTGATGCTAAGGCGATAAAGGAGGAAATTGACAAGAGG
CTTGCAGAAATCCTAGGTCCCAAGACAGAAGCTGACAATATAAAACCAGTGAAAAAGAAG
AAGGAAAAACCAGCAAAAGTTGAGGAGAAAAAAGTTGCAGTTGCCACTGCTGCCCCACCA
TCTGAGGAGGAATTGAACCCGTACACTATATTTCCCCAACCAGAGGAAAACTTCAAGGTT
CATACAGAAATATTTTTCAGTGATGGGAACATATGGAGAGCGCATAACACAAAGGAAATT
TTAGAAAAACATCTTAAAGCAACTGGAGGAAAAGTGATGACCCGTTTTCCACCAGAACCT
AATGGATATCTTCATATTGGTCATGCCAAGGCTATGTTTATTGATTTTGGTCTGGCTAAG
GAGCGAAATGGCCATTGCTACCTTAGATTTGATGACACAAATCCAGAAGCTGAAAAGAAA
GAATACATAGATCACATTCAGGAAATCGTCCATTGGATGGGATGGGAGCCCTACAAAGTA
ACATACACGAGTGACTATTTCCAAGCTTTGTATGAACATGCCGTTGAGTTAATACAGAAA
GGGCTAGCATATGTGGATCACCAGACTGCAGAAGAAATCAAGGAATACAGGGAAAAGAAG
ATGGATAGTCCATGGAGGGGTAGGCCAATTGAAGAGTCTCTGAAATTATTTGAAGACATG
AGGCGTGGGTTGATTGCAGAGGGTGCAGCAACTCTCCGTATGAAGCAGGATATGCAAAAT
GAGAACAAAAATATGTCTGACTTAATAGCATATAGAATAAAATTCACCCCCCATCCACAT
GCTGGCGACAAGTGGTGTGTCTATCCGAGCTATGACTACGCTCATTGCATGGTGGATTCT
CTTGAAAACATCACACATTCGCTGTGCACACTTGAGTTTGACATACGTCGCCCTTCATAC
TACTGGCTACTTGTTGCCTTGGGCCTTTATCAACCATATGTGTGGGAATATTCGAGGCTA
AACATATCAAATACTGTGATGTCTAAAAGAAAGTTGAATCGACTTGTGACAGAGAAGTGG
GTAGATGGGTGGGATGATCCCCGCTTGTTGACACTGGCTGGTCTCCGGCGACGGGGAGTA
TCATCAACTGCAATAAATTCCTTTATTCGTGGAATCGGGATAACGAGAAGTGACAATAGC
TTAATTCGTGTTGATCGTCTAGAATATCACATCAGGGAGGAGCTTAACAAAACAGCCCCT
CGAACCATGGTTGTTTTGCGACCTCTAAAGGTGGTAATAACTAACTTGGAAGAAGGAAAA
GTACTAGACCTTGATGGCAAAATGTGGCCTGATGCTTCTGATACTGATGCTTCCTCCCAC
TATAAGGTTCCGTTCTCAAGAACTGTCTACATTGAGAAAACTGATTTTCGCCTAAAGGAC
TCAAAAGACTACTATGGGCTAGCCCCTGGTAAATCTGTCATGCTAAGGTATGCGTTCCCC
ATAAAATGCACAGATGTTATCTCTGGTGATAGTCCTGATGATATTGTTGAAATTCGAGCT
GAATATGATCCTTTGAAGACTTCTAAACTGAAGGGTGTTCTTCACTGGATTGCTGAGCCA
GCACCTGGTGTAGAGCCATTGAAGGTGGAAGTAAGATTATTCGAGAAATTGTTCATGTCA
GAGAATCCTGCTGAATTGGAAGATTGGCTTGGCGATCTTAACCCACACTCGAAAGAGGTG
ATAAAGGATGCTTATGCTGTACCATCACTTGCCACTGCGGTTCTGGGTGACAAGTTC

Peptide Sequence

PEP ID

Zm00001d008846_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:8:22494443:22499822:1 gene:Zm00001d008846 transcript:Zm00001d008846_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutaminyl-tRNA synthetase

Sequence

MGTGGDGSKAGPALPLEALLALGLDQRTAENALVNAKVTANLASVIAEAGIKECDKSVGN
LLYAVATKYPTNALVHRPVLISYVLSTKIKNPAQLDAALSFLTNTGPDSLDVVKFEEACG
VGVVVSIEEIKSTVTDVLEENMEAIKEQRYHINVGTLCGQVRKRHPWGDAKAIKEEIDKR
LAEILGPKTEADNIKPVKKKKEKPAKVEEKKVAVATAAPPSEEELNPYTIFPQPEENFKV
HTEIFFSDGNIWRAHNTKEILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK
ERNGHCYLRFDDTNPEAEKKEYIDHIQEIVHWMGWEPYKVTYTSDYFQALYEHAVELIQK
GLAYVDHQTAEEIKEYREKKMDSPWRGRPIEESLKLFEDMRRGLIAEGAATLRMKQDMQN
ENKNMSDLIAYRIKFTPHPHAGDKWCVYPSYDYAHCMVDSLENITHSLCTLEFDIRRPSY
YWLLVALGLYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGV
SSTAINSFIRGIGITRSDNSLIRVDRLEYHIREELNKTAPRTMVVLRPLKVVITNLEEGK
VLDLDGKMWPDASDTDASSHYKVPFSRTVYIEKTDFRLKDSKDYYGLAPGKSVMLRYAFP
IKCTDVISGDSPDDIVEIRAEYDPLKTSKLKGVLHWIAEPAPGVEPLKVEVRLFEKLFMS
ENPAELEDWLGDLNPHSKEVIKDAYAVPSLATAVLGDKF

Transcript Sequence

Transcript ID

Zm00001d008846_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:22494443:22499822:1 gene:Zm00001d008846 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutaminyl-tRNA synthetase

Sequence

CTAGGGAGCGGGAGAGGCTGCTGCTGCTGCTGCTACCGCGGCGGCGCCGGAGGGGATGGG
CACCGGGGGAGACGGGAGCAAGGCGGGCCCGGCGCTGCCGCTCGAGGCGCTGCTGGCGCT
CGGCCTCGACCAGCGCACCGCCGAGAACGCGCTCGTCAACGCCAAGGTCACCGCCAACCT
CGCCTCCGTCATAGCCGAGGCTGGTATAAAGGAATGCGACAAGTCAGTCGGCAATCTTCT
GTATGCAGTCGCCACCAAGTACCCAACTAATGCACTTGTTCACCGTCCTGTCCTTATTAG
CTATGTCTTGTCAACAAAGATAAAGAACCCCGCACAGCTAGATGCTGCTCTGTCATTTCT
TACTAATACTGGTCCTGATTCTCTAGATGTGGTCAAATTTGAAGAAGCATGTGGTGTAGG
TGTGGTTGTTTCTATTGAGGAAATTAAATCTACTGTTACTGATGTGCTTGAGGAGAATAT
GGAAGCTATAAAGGAGCAGCGATATCACATAAATGTTGGTACACTATGCGGACAGGTCAG
GAAGAGACACCCCTGGGGTGATGCTAAGGCGATAAAGGAGGAAATTGACAAGAGGCTTGC
AGAAATCCTAGGTCCCAAGACAGAAGCTGACAATATAAAACCAGTGAAAAAGAAGAAGGA
AAAACCAGCAAAAGTTGAGGAGAAAAAAGTTGCAGTTGCCACTGCTGCCCCACCATCTGA
GGAGGAATTGAACCCGTACACTATATTTCCCCAACCAGAGGAAAACTTCAAGGTTCATAC
AGAAATATTTTTCAGTGATGGGAACATATGGAGAGCGCATAACACAAAGGAAATTTTAGA
AAAACATCTTAAAGCAACTGGAGGAAAAGTGATGACCCGTTTTCCACCAGAACCTAATGG
ATATCTTCATATTGGTCATGCCAAGGCTATGTTTATTGATTTTGGTCTGGCTAAGGAGCG
AAATGGCCATTGCTACCTTAGATTTGATGACACAAATCCAGAAGCTGAAAAGAAAGAATA
CATAGATCACATTCAGGAAATCGTCCATTGGATGGGATGGGAGCCCTACAAAGTAACATA
CACGAGTGACTATTTCCAAGCTTTGTATGAACATGCCGTTGAGTTAATACAGAAAGGGCT
AGCATATGTGGATCACCAGACTGCAGAAGAAATCAAGGAATACAGGGAAAAGAAGATGGA
TAGTCCATGGAGGGGTAGGCCAATTGAAGAGTCTCTGAAATTATTTGAAGACATGAGGCG
TGGGTTGATTGCAGAGGGTGCAGCAACTCTCCGTATGAAGCAGGATATGCAAAATGAGAA
CAAAAATATGTCTGACTTAATAGCATATAGAATAAAATTCACCCCCCATCCACATGCTGG
CGACAAGTGGTGTGTCTATCCGAGCTATGACTACGCTCATTGCATGGTGGATTCTCTTGA
AAACATCACACATTCGCTGTGCACACTTGAGTTTGACATACGTCGCCCTTCATACTACTG
GCTACTTGTTGCCTTGGGCCTTTATCAACCATATGTGTGGGAATATTCGAGGCTAAACAT
ATCAAATACTGTGATGTCTAAAAGAAAGTTGAATCGACTTGTGACAGAGAAGTGGGTAGA
TGGGTGGGATGATCCCCGCTTGTTGACACTGGCTGGTCTCCGGCGACGGGGAGTATCATC
AACTGCAATAAATTCCTTTATTCGTGGAATCGGGATAACGAGAAGTGACAATAGCTTAAT
TCGTGTTGATCGTCTAGAATATCACATCAGGGAGGAGCTTAACAAAACAGCCCCTCGAAC
CATGGTTGTTTTGCGACCTCTAAAGGTGGTAATAACTAACTTGGAAGAAGGAAAAGTACT
AGACCTTGATGGCAAAATGTGGCCTGATGCTTCTGATACTGATGCTTCCTCCCACTATAA
GGTTCCGTTCTCAAGAACTGTCTACATTGAGAAAACTGATTTTCGCCTAAAGGACTCAAA
AGACTACTATGGGCTAGCCCCTGGTAAATCTGTCATGCTAAGGTATGCGTTCCCCATAAA
ATGCACAGATGTTATCTCTGGTGATAGTCCTGATGATATTGTTGAAATTCGAGCTGAATA
TGATCCTTTGAAGACTTCTAAACTGAAGGGTGTTCTTCACTGGATTGCTGAGCCAGCACC
TGGTGTAGAGCCATTGAAGGTGGAAGTAAGATTATTCGAGAAATTGTTCATGTCAGAGAA
TCCTGCTGAATTGGAAGATTGGCTTGGCGATCTTAACCCACACTCGAAAGAGGTGATAAA
GGATGCTTATGCTGTACCATCACTTGCCACTGCGGTTCTGGGTGACAAGTTC