Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008826_T162
CDS Infomation	cds chromosome:B73_RefGen_v4:8:21787340:21795605:-1 gene:Zm00001d008826 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gigantea1 description: gigantea1
Sequence	ATGGTGTGGCGGTGTAATGGGAAAATATGCTGCTGGTGGAGAGTTGAAGCCTCCAACTAC TGCCCCAGATGGGCTGTTGCCAATGGAGCTGGAGTTATATTAAGTGTCTGTGATGAGGAG GTAGCTCGTTATGAGACAGCAAATTTAACAGCAGCAGCTGTTCCTGCGCTTCTGCTACCT CCACCAACAACACCCTTGGACGAGCATTTGGTGGCTGGCCTGCCCCCTCTTGAACCATAT GCTCGGTTGTTCCATAGATACTATGCAATTGCTACACCAAGTGCTACACAGAGGTTGCTT TTTGGTCTTCTGGAAGCACCACCATCATGGGCTCCAGATGCACTTGATGCAGCAGTACAA CTAGTTGAGCTACTTAGAGCAGCCGAAGATTATGCTTCTGGCATGCGGCTTCCAAAAAAT TGGATGCATCTGCATTTCTTGCGTGCGATTGGAACTGCAATGTCAATGAGAGCTGGCATT GCTGCTGATACAGCTGCTGCTTTGCTTTTCCGAATACTTTCCCAACCAACGCTGCTTTTT CCACCACTGAGACATGCCGAAGGAGTTGAAGTACATCATGAACCACTAGGTGGCTATGTA TCATCATATAAGAAGCAGTTGGAAGTTCCTGCATCTGAGGCCACTATCGATGCCACTGCA CAAGGCATTGCTTCTTTGTTGTGTGCTCATGGCCCTGATGTTGAGTGGAGAATATGTACC ATCTGGGAAGCTGCCTATGGTTTGCTACCGCTAAGTTCATCAGCAGTTGATTTGCCTGAA ATTGTTGTAGCTGCCCCGCTTCAGCCACCTACACTGTCATGGAGCCTGTACTTACCATTA TTAAAAGTATTTGAGTATCTACCTCGTGGCAGTCCATCTGAAGCATGCCTTATGAGGATA TTTGTGGCAACGGTTGAAGCTATACTTAGGAGAACTTTTCCTTCTGAAACATCAGAGCAA TCCAGAAAGCCAAGAAGTCAATCTAAGAACCTTGCTGTTGCTGAACTTCACACAATGATA CATTCACTCTTTGTTGAATCCTGTGCCTCAATGGACCTTGCCTCCCGGTTGCTATTTGTG GTGTTAACTGTTTGTGTCAGTCATCAAGCTTTGCCAGGGGGTAGCAAAAGACCAACTGGT AGTGATAACCATTCCCACGAGGAAGCCACTGAGCATTCAAGATTAACAAATGGAAGAAGC AGATGTAAGAAGAGACAAGGCCCTGTTGCTACGTTTGATTCATATGTTCTAGCTGCAGTT TGTGCCTTATCTTGTGAGCTCCAGCTGTTCCCTTTCATTACTAAGAATGGATCACATTCA AATTTAAAGGATTCCATGAAGATTATCATATCTGGAAAAAACAATGGGATGAATAATGAG CTACACAACAGCATCAGCTCAGCAATTCTTCATACTCGCAGAATTCTTGGCATCTTGGAA GCCGTTTTCTCCCTGAAGCCATCATCAGTTGGTACCTCATGGAGCTATAGCTCAAATGAA ATAGTTGCAGCAGCTATGGTTGCTGCTCATGTTTCTGAGTTATTTCGTCGGTCCAGGCCA TGCCTTAATGCACTCTCTGCACTAATGAGATGCAAGTGGGATGCTGAGATTTCGACCAGG GCATCATCTCTCTACCATTTGATTGACTTGCATGGTAAAACAGTTTCCTCCATTGTGAAC AAAGCTGAGCCTCTTGAAGCTCACCTGACCCTTACACCAGTAAAGAGGGATAATCAACAT CACCGTGAGGAAAGCAATACCAGCTCATTGGATAGTGTCAAGTTGGAAAACAAGAATGGT TCAACATCACACAAGAAAAACGGTTTCTCAAGACCACTCTTGAAATGTGCAGAAGAGGTC CTACTGAATGGCGATGTTGCAAGTACATCTGGGAAATCCATTGCAAGCTTACAGGTGGAA GCATCTGATTTGGCAAACTTCCTTACCATGGATCGGAATGGGGGTTACCGAGGTTCACAA ACTCTTCTAAGATCTGTATTATCAGAGAAACAAGAGCTGTGCTTCTCTGTTGTCTCATTG CTCTGGCAGAAGCTCATAGCTTCTCCTGAAATGCAGATGTCTGCAGAAAGTACATCAGCT CACCAAGGATGGAGGAAGGTTGTTGATGCACTTTGTGATGTCGTTTCAGCCTCACCAACC AAGGCATCAGCTGCTATCGTTCTCCAGGCCGAGAAGGACTTGCAGCCTTGGATTGCTAGA GATGACGAACAAGGTCAGAAGATGTGGAGAGTCAACCAGCGTATAGTGAAGCTTATAGCT GAGCTTATGAGGAACCATGACAGCCCTGAAGCGTTGGTGATACTCGCTAGTGCCTCCGAC CTTCTACTTCGTGCTACCGATGGAATGCTCGTCGATGGTGAAGCTTGTACTTTGCCACAG CTTGAGCTTCTGGAAGTGACCGCTCGGGCTGTCCATCTTATCATCGAATGGGGAGATTCA GGTTTATCAGTTGCAGATGGTCTTTCAAATCTGCTGAAGTGCCGTCTATCAACCACCATC CGCTGCCTTTCTCACCCAAGTGCACACGTGCGCGCACTCAGCATGTCTGTCCTCCGCGAC ATCCTGAGCAACGGATCCGTGAACCCCAACAAGACAATCCAAGGGGAACAGCAGCGGAAC GGCATCCAGAGCCCGTCCTACCGGTGCCTGGCCGCAGGCATCATCAACTGGCAAGCGGAC GTCGAGAGGTGCATAGAGTGGGAAGCCCACAGCCGCCGCGCCACTGGGCTGACGCTCGCC TTCCTCAGTGCCGCAGCGAAGGAGCTCGGCTGCCCTCTCCCGTCATGA

Peptide Sequence

PEP ID	Zm00001d008826_P162
PEP Infomation	pep chromosome:B73_RefGen_v4:8:21787340:21795605:-1 gene:Zm00001d008826 transcript:Zm00001d008826_T162 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gigantea1 description: gigantea1
Sequence	MVWRCNGKICCWWRVEASNYCPRWAVANGAGVILSVCDEEVARYETANLTAAAVPALLLP PPTTPLDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLFGLLEAPPSWAPDALDAAVQ LVELLRAAEDYASGMRLPKNWMHLHFLRAIGTAMSMRAGIAADTAAALLFRILSQPTLLF PPLRHAEGVEVHHEPLGGYVSSYKKQLEVPASEATIDATAQGIASLLCAHGPDVEWRICT IWEAAYGLLPLSSSAVDLPEIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRI FVATVEAILRRTFPSETSEQSRKPRSQSKNLAVAELHTMIHSLFVESCASMDLASRLLFV VLTVCVSHQALPGGSKRPTGSDNHSHEEATEHSRLTNGRSRCKKRQGPVATFDSYVLAAV CALSCELQLFPFITKNGSHSNLKDSMKIIISGKNNGMNNELHNSISSAILHTRRILGILE AVFSLKPSSVGTSWSYSSNEIVAAAMVAAHVSELFRRSRPCLNALSALMRCKWDAEISTR ASSLYHLIDLHGKTVSSIVNKAEPLEAHLTLTPVKRDNQHHREESNTSSLDSVKLENKNG STSHKKNGFSRPLLKCAEEVLLNGDVASTSGKSIASLQVEASDLANFLTMDRNGGYRGSQ TLLRSVLSEKQELCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDVVSASPT KASAAIVLQAEKDLQPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALVILASASD LLLRATDGMLVDGEACTLPQLELLEVTARAVHLIIEWGDSGLSVADGLSNLLKCRLSTTI RCLSHPSAHVRALSMSVLRDILSNGSVNPNKTIQGEQQRNGIQSPSYRCLAAGIINWQAD VERCIEWEAHSRRATGLTLAFLSAAAKELGCPLPS

Transcript Sequence

Transcript ID	Zm00001d008826_T162
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:21787340:21795605:-1 gene:Zm00001d008826 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gigantea1 description: gigantea1
Sequence	GAGGCGATCTCCCCACCCCAGCCCACAACCCCAGCCCACCGAACAGGTATCTCCCTCCCC CGCACCCGCGGCCGCTCGCCGACGCGTGGGCCCGTGCATAGCCCGCGTCCACCTGTCGGT GACTGCAGCCATCCGCGTGGGGCCTCCACCTGTAGCGCGCGGGTGAAATAACGCGGCCGC ACCACCACCACGCCCTGCATCGCGGAAAAAATCTTTTTCTCGCCTCTCCTCGCTCCTCGC CATTTCTCTCTCTTCCCCTCCGCTTCGCCCACCGCCCGCTCCGAAATCTGCGCGCCGACG CCGCCGGCTGCCCGTGGAGAGCCTCGAATTAGAGCGCGTTCCGTCGAGGCTCTTGAGCTA CCAAGCATGTCAGATTCAAATGTGAAGTGGATTGATGGGCTCCAGTTCACATCATTGTAC TGGCCTCCACCCCTCGATGCGGAGCAGAAGCAGGCACAAATTTTGGCATATGTCGAGTAC TTTGGCCAGTTTACAGCTGACACCGATCAATTCCCTGAAGACATAGCTCAGCTCATTCAA AGTTCCTATCCATCAAAAGAAAATCGCTTGGTAGATGAAGTATTGGCAACTTTTGTTCTT CATCATCCGGAGCATGGTCATGCAGTTGCACATCCAATTCTTTCACGCATCATAGATGGG ACGCTGTGCTATGATAGACATGGTCCCCCATTCAGTTCCTTCATCTCTTTATTCAGCCAT AATTCTGAGCAAGAGTACTCAGAGCAGTGGGCCTTGGCCTGTGGAGAAATTCTTAGGGTC TTAACTCACTACAATAGGCCAATATTCAAAGTTGAGCGCCAACATACTGAAGCTGAATGT AGCAGCACATCTGATCAGGCAACATCTAGTGATTCCACAGATAAGAGATCTAATAATTCT CCAGGAAATGAATCTGACTGGAAGCCATTGAGGCCACTAACCCCGTGGATCACTGACATA TTGCTAGCCGCACCTTTGGGCATTCGAAGTGACTATTTTCGATGGTGTGGCGGTGTAATG GGAAAATATGCTGCTGGTGGAGAGTTGAAGCCTCCAACTACTGCCCCAGATGGGCTGTTG CCAATGGAGCTGGAGTTATATTAAGTGTCTGTGATGAGGAGGTAGCTCGTTATGAGACAG CAAATTTAACAGCAGCAGCTGTTCCTGCGCTTCTGCTACCTCCACCAACAACACCCTTGG ACGAGCATTTGGTGGCTGGCCTGCCCCCTCTTGAACCATATGCTCGGTTGTTCCATAGAT ACTATGCAATTGCTACACCAAGTGCTACACAGAGGTTGCTTTTTGGTCTTCTGGAAGCAC CACCATCATGGGCTCCAGATGCACTTGATGCAGCAGTACAACTAGTTGAGCTACTTAGAG CAGCCGAAGATTATGCTTCTGGCATGCGGCTTCCAAAAAATTGGATGCATCTGCATTTCT TGCGTGCGATTGGAACTGCAATGTCAATGAGAGCTGGCATTGCTGCTGATACAGCTGCTG CTTTGCTTTTCCGAATACTTTCCCAACCAACGCTGCTTTTTCCACCACTGAGACATGCCG AAGGAGTTGAAGTACATCATGAACCACTAGGTGGCTATGTATCATCATATAAGAAGCAGT TGGAAGTTCCTGCATCTGAGGCCACTATCGATGCCACTGCACAAGGCATTGCTTCTTTGT TGTGTGCTCATGGCCCTGATGTTGAGTGGAGAATATGTACCATCTGGGAAGCTGCCTATG GTTTGCTACCGCTAAGTTCATCAGCAGTTGATTTGCCTGAAATTGTTGTAGCTGCCCCGC TTCAGCCACCTACACTGTCATGGAGCCTGTACTTACCATTATTAAAAGTATTTGAGTATC TACCTCGTGGCAGTCCATCTGAAGCATGCCTTATGAGGATATTTGTGGCAACGGTTGAAG CTATACTTAGGAGAACTTTTCCTTCTGAAACATCAGAGCAATCCAGAAAGCCAAGAAGTC AATCTAAGAACCTTGCTGTTGCTGAACTTCACACAATGATACATTCACTCTTTGTTGAAT CCTGTGCCTCAATGGACCTTGCCTCCCGGTTGCTATTTGTGGTGTTAACTGTTTGTGTCA GTCATCAAGCTTTGCCAGGGGGTAGCAAAAGACCAACTGGTAGTGATAACCATTCCCACG AGGAAGCCACTGAGCATTCAAGATTAACAAATGGAAGAAGCAGATGTAAGAAGAGACAAG GCCCTGTTGCTACGTTTGATTCATATGTTCTAGCTGCAGTTTGTGCCTTATCTTGTGAGC TCCAGCTGTTCCCTTTCATTACTAAGAATGGATCACATTCAAATTTAAAGGATTCCATGA AGATTATCATATCTGGAAAAAACAATGGGATGAATAATGAGCTACACAACAGCATCAGCT CAGCAATTCTTCATACTCGCAGAATTCTTGGCATCTTGGAAGCCGTTTTCTCCCTGAAGC CATCATCAGTTGGTACCTCATGGAGCTATAGCTCAAATGAAATAGTTGCAGCAGCTATGG TTGCTGCTCATGTTTCTGAGTTATTTCGTCGGTCCAGGCCATGCCTTAATGCACTCTCTG CACTAATGAGATGCAAGTGGGATGCTGAGATTTCGACCAGGGCATCATCTCTCTACCATT TGATTGACTTGCATGGTAAAACAGTTTCCTCCATTGTGAACAAAGCTGAGCCTCTTGAAG CTCACCTGACCCTTACACCAGTAAAGAGGGATAATCAACATCACCGTGAGGAAAGCAATA CCAGCTCATTGGATAGTGTCAAGTTGGAAAACAAGAATGGTTCAACATCACACAAGAAAA ACGGTTTCTCAAGACCACTCTTGAAATGTGCAGAAGAGGTCCTACTGAATGGCGATGTTG CAAGTACATCTGGGAAATCCATTGCAAGCTTACAGGTGGAAGCATCTGATTTGGCAAACT TCCTTACCATGGATCGGAATGGGGGTTACCGAGGTTCACAAACTCTTCTAAGATCTGTAT TATCAGAGAAACAAGAGCTGTGCTTCTCTGTTGTCTCATTGCTCTGGCAGAAGCTCATAG CTTCTCCTGAAATGCAGATGTCTGCAGAAAGTACATCAGCTCACCAAGGATGGAGGAAGG TTGTTGATGCACTTTGTGATGTCGTTTCAGCCTCACCAACCAAGGCATCAGCTGCTATCG TTCTCCAGGCCGAGAAGGACTTGCAGCCTTGGATTGCTAGAGATGACGAACAAGGTCAGA AGATGTGGAGAGTCAACCAGCGTATAGTGAAGCTTATAGCTGAGCTTATGAGGAACCATG ACAGCCCTGAAGCGTTGGTGATACTCGCTAGTGCCTCCGACCTTCTACTTCGTGCTACCG ATGGAATGCTCGTCGATGGTGAAGCTTGTACTTTGCCACAGCTTGAGCTTCTGGAAGTGA CCGCTCGGGCTGTCCATCTTATCATCGAATGGGGAGATTCAGGTTTATCAGTTGCAGATG GTCTTTCAAATCTGCTGAAGTGCCGTCTATCAACCACCATCCGCTGCCTTTCTCACCCAA GTGCACACGTGCGCGCACTCAGCATGTCTGTCCTCCGCGACATCCTGAGCAACGGATCCG TGAACCCCAACAAGACAATCCAAGGGGAACAGCAGCGGAACGGCATCCAGAGCCCGTCCT ACCGGTGCCTGGCCGCAGGCATCATCAACTGGCAAGCGGACGTCGAGAGGTGCATAGAGT GGGAAGCCCACAGCCGCCGCGCCACTGGGCTGACGCTCGCCTTCCTCAGTGCCGCAGCGA AGGAGCTCGGCTGCCCTCTCCCGTCATGACAAGGCCATTCCTGGATCTGACATCGGCTTC CAATTGACGGTCAGTGCTGGCACAGCTGCTGCAGGGTCCGCGAGTAGGACGGCTCTAATC TCTCCATCACGTGTTATTATCTGGTGTTTCCATAATGCGATTTGATTTCAATTTGGCGTT AGATGTTGTACACGTGTATTTAACTGCTTGAG