Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008815_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:21381514:21388543:1 gene:Zm00001d008815 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aurora-related protein kinase family protein%3B Serine/threonine-protein kinase Eg2-like

Sequence

ATGGCGGTCGCCACCGAGTCGCGCGGCAGCGAGGACAGGGCTTCAGCCCATGCGAACCAG
GAGAAGCGGTGGGTGCTGTCTGATTTCGAGGTTGGGAAACCTCTTGGGAGGGGCAAGTTT
GGCCATGTTTATCTTGCCAGAGAAAAAAGGAGTAGTGAGATTGTGGCTTTGAAAGTTCTT
TTCAAGAGCCAGCTCAAGCAATCACAGGTTGAGCATCAGCTGCGACGTGAAGTGGAGATT
CAGAGTCATCTTCGTCATCCTAATATTCTTCGCCTGTATGGGTACTTCTATGATCAGACC
AGGGTTTACCTAATCCTGGAATACGCTGCCAAGGGTGAACTGTATAAGGAACTGACAAGG
TGTAAACATTTTTCAGAGCGACGCACAGCGACTTATGTCGCTTCGTTGGCTAGAGCTTTG
ATCTACCTTCATGGCAAGCATGTTATCCATCGGGACATTAAACCAGAGAATCTTTTAGTT
GGAGTTCAGGGCGAGATCAAAATTGCCGACTTTGGCTGGTCTGTGCACACCTTCAACAGA
AGACGGACTATGTGCGGAACTCTGGATTACCTGCCACCTGAAATGGTGGAGAAGGCAGAA
CATGATTACCATGTTGATATATGGAGCCTTGGTGTTCTGTGCTATGAGTTCCTTTACGGG
GTCCCACCTTTCGAAGCTAAGGAGCACTCAGAAACCTACAGAAGGATAGTGAAAGTCGAC
TTGAAGTTCCCACTGAAACCATTCGTTTCACCTGCCGCAAAGGACTTGATTTCTCAGATG
CTGGTCAAGAGCTCGGCGCAGCGGCTGCCTCTCCACAAGGTTCTTGAGCACCCGTGGATC
GTCCAGAACGCCGACCCTTCCGGCGTGTACAGAGAAGGTAGATCCGTCTAA

Peptide Sequence

PEP ID

Zm00001d008815_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:21381514:21388543:1 gene:Zm00001d008815 transcript:Zm00001d008815_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aurora-related protein kinase family protein%3B Serine/threonine-protein kinase Eg2-like

Sequence

MAVATESRGSEDRASAHANQEKRWVLSDFEVGKPLGRGKFGHVYLAREKRSSEIVALKVL
FKSQLKQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQTRVYLILEYAAKGELYKELTR
CKHFSERRTATYVASLARALIYLHGKHVIHRDIKPENLLVGVQGEIKIADFGWSVHTFNR
RRTMCGTLDYLPPEMVEKAEHDYHVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIVKVD
LKFPLKPFVSPAAKDLISQMLVKSSAQRLPLHKVLEHPWIVQNADPSGVYREGRSV

Transcript Sequence

Transcript ID

Zm00001d008815_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:21381514:21388543:1 gene:Zm00001d008815 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aurora-related protein kinase family protein%3B Serine/threonine-protein kinase Eg2-like

Sequence

GACTTTCTTCTTTTTTTTTTCAAGCTAAACCACGAGCGGGCGCGGGGCGACTGGGCGAGG
CGAGCTGCCAAGGATTCGACCGTTGCGTTCTCCGCCCAAATCTTAGAAATCCCAATCCCA
GATCGTCCTCCAATTTCAAACTTCTCGACTCGCCCCTCCCCGTCCGGCCGTCCCACCCAC
GCTTCCTCCCCCTCCGCGCCGCTCCTACAGGCTCTAACCATGGCGGTCGCCACCGAGTCG
CGCGGCAGCGAGGACAGGGCTTCAGCCCATGCGAACCAGGAGAAGCGGTGGGTGCTGTCT
GATTTCGAGGTTGGGAAACCTCTTGGGAGGGGCAAGTTTGGCCATGTTTATCTTGCCAGA
GAAAAAAGGAGTAGTGAGATTGTGGCTTTGAAAGTTCTTTTCAAGAGCCAGCTCAAGCAA
TCACAGGTTGAGCATCAGCTGCGACGTGAAGTGGAGATTCAGAGTCATCTTCGTCATCCT
AATATTCTTCGCCTGTATGGGTACTTCTATGATCAGACCAGGGTTTACCTAATCCTGGAA
TACGCTGCCAAGGGTGAACTGTATAAGGAACTGACAAGGTGTAAACATTTTTCAGAGCGA
CGCACAGCGACTTATGTCGCTTCGTTGGCTAGAGCTTTGATCTACCTTCATGGCAAGCAT
GTTATCCATCGGGACATTAAACCAGAGAATCTTTTAGTTGGAGTTCAGGGCGAGATCAAA
ATTGCCGACTTTGGCTGGTCTGTGCACACCTTCAACAGAAGACGGACTATGTGCGGAACT
CTGGATTACCTGCCACCTGAAATGGTGGAGAAGGCAGAACATGATTACCATGTTGATATA
TGGAGCCTTGGTGTTCTGTGCTATGAGTTCCTTTACGGGGTCCCACCTTTCGAAGCTAAG
GAGCACTCAGAAACCTACAGAAGGATAGTGAAAGTCGACTTGAAGTTCCCACTGAAACCA
TTCGTTTCACCTGCCGCAAAGGACTTGATTTCTCAGATGCTGGTCAAGAGCTCGGCGCAG
CGGCTGCCTCTCCACAAGGTTCTTGAGCACCCGTGGATCGTCCAGAACGCCGACCCTTCC
GGCGTGTACAGAGAAGGTAGATCCGTCTAAGCTTCTGTTGCAGTGTCGCCCGCCCCACCC
CAAACTGTATGGATTAGCGACCCTGTTGAACAATCTTCTTACTTGTCTCTCTCTATATAT
GAATATGAATGTACATGTTCTAAGCCTCTCTGGCTCTCTGAAGATTTTTGTAATATTCAA
TATGACAGCCCATATGAGCCTTAAAAGA