Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008763_T027
CDS Infomation

cds chromosome:B73_RefGen_v4:8:19451005:19456818:1 gene:Zm00001d008763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of polycomb-like transcription factor protein
Sequence

ATGACAACTGCACCTTCACTACTGCCTTGGCACCATAAAAAAATGTTAACAGAAAGCAAT
TTGACTAATGGTTCTCAGCAATCCATGTCATGTACTTTGGATGAGGATCAGCAGCAGTTG
GTAACAGAACATGCATCTGACACAGTTTTTCATGCTCCACCTCAAGTTTGTTCACTTAAT
CTCGGTTCATCACCTGATAGTCCATTGGATATGGCTTCTGCTAGTTGTGCAAATCCATCT
AGCTCTGCTAGTAGGGAATCCAATATTGCTGAAAGGAATGTAAGCACAGAATGTAATGGC
AGCAGTATTGGTGATGCAAATATAATTCACAGGAAGTGTGAAGATCAAAATGGGCCTTGT
GCTGGTCCTGACAAGTCATTTTCCTCCAACCTTAGTGTTATTTGCTCTTCACAGAAGTCT
GCAGAGAGTCGTCTTTCCATAAATATTGACAAAGCAAATGATAAACCTCTTGACAACGAT
GAAAAAGAAAAGCAACCTATATCTAACTTGGTTCAGGAATTGAATGAACATCCAATTGGC
TGTGTTACACCTACTGCCCCTAGAACTACTTCCCATAGGAACCGGTTTACATCTATATCA
CGTGCTTTTGGAGATGGTTCAAAATTACTGCCAGAAGACCACGTGTTGACTGGCTTTGCT
GGTGGTTCTAAGAAACCACGAAGTCAAGTTTCATACTCAGTTTCTCCTAAAAGTGAGGAA
CTTGGCATAAAAAACAAAGGTCATTTCCGCAAGATACAATCTCATGTTAGTGCAAAGATA
AATGATGCAAAGAAACTTCCTGATAGTTCTAGAAGTGGGCATAGCAGCCCGGAGTCATTG
ACTTGCGTTGCAAATGTTCTTGTTACAGTGGGTGATAGAGGTTGGAGGGAGTATGATACC
CAGATCACAATGGATTCCGATGGTCAGAGTGAAAGGAGGATATGCGTGAAACTTGCTGAA
GGGACCAAGTATGCTCACAAGGTCTGTCAAGTTTTGCAGCCTGGGGCCACAAACCGCTAT
ACACATGCCATGATGTGGAAAGGTGGTGCTGAATGGTGCCTGGAATTTCCTGACAGAAGC
CAGTGGTTGATTTTCAAGCAAATGCACGATGAGTGCTATAGCCATAACATCAGAGCTGCT
TCTGTGAGAAACATTCCAATCCCTGGTGTCCATTTGGTTGAAATCCATGATGATAATGAT
GTGGTATCCTTTGTGCAATCTGAAGCTTATCTTGTTCACATCGGAACAGATGTTGAAATT
GCTCTTGATCAATCCCGTGTGTTATATGACATGGACAGCGATGATGAAGAGTGGATATCA
AGCTGGCGGAAATCCTTAGTAAGAGACAACACCACCACACTTCAGTTTGCAGAAGATTTG
TTTGAGAGGGTTATGGACAAACTAGAGAAGTTTGCATATAGCCACAACTGTAATGGACTC
AGCATTGATCAGATGAAGGAACTGGAGACTGATGATGTACCTCTGCACACTATTGAAGTG
ATACATGCATATTGGCAAGACAAGAGGCAGAAAAGGGGAATGCCACTTATTCGACATTTT
CAGTCGGCTATGTGGAAGATCTACGAGCAGCAGCTGCATGAATGGGAATCAAAAGTATGC
AGAATGCAGAGTTCGTCAAATGGGTACCAAGAAAAGAAATTGCCTCCCAAGCCTGCATTG
TTTGCCTTCTGTTTGAGGCCTCGTGGACTCCATGTACCATACAAGGGGCCAAAGCAGCGT
TCTCATAAGAAGCTTATGTCCACAGGCTGCCATAGCTTTTCAAGAGAGCATGATGGCTTT
TACCGGCAAGTATCAGGCAGGAGATACAATGAATGCACTGGGGATGGGAGGATAAGCGAA
TCGTATGACACTGGTTCTCTTTACTCCCCAACAGGGTACTCTCCCAGGTTCTCTACAAGA
ACAGATTCTCCTCGGGCATTCGAGTCCTCAGAACGAAGCTCCACACCAAGATTTTCCAGG
AACAACAGTAGCACCAAAAGGAGCGCAGCCCTTGCTTTCTCCGACGACCACCAGCCATCA
CCTTCCTGCCGCCCCCAGAGAGCGAAACGGAGCGCGCACGACCACTGGAACGCTGCTATC
CACGACTGGCAGAACTCGAAGCACCTCTTCCCGGGCTCCTCCCGCGTCGACGTCGAGGAG
CTGAAGCTGCGGGACGCCGCGGGCGCAGCGCAGCACGCCGCCGCCATGGCGAGGCTCAAG
AGGGAGAAGGCCCACTGCCTGATGCAGAAGGCTGACCTCGCCCTCCACAGGGCCACGGTA
GCCCTCATGATTGCCGACGCGATCAAATCATCTGGCAGGGACACGACCCGGGACGGCCGA
AGGGATTCGAGGAACGAGGAGCGCTGA

Peptide Sequence

PEP ID

Zm00001d008763_P027
PEP Infomation

pep chromosome:B73_RefGen_v4:8:19451005:19456818:1 gene:Zm00001d008763 transcript:Zm00001d008763_T027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of polycomb-like transcription factor protein
Sequence

MTTAPSLLPWHHKKMLTESNLTNGSQQSMSCTLDEDQQQLVTEHASDTVFHAPPQVCSLN
LGSSPDSPLDMASASCANPSSSASRESNIAERNVSTECNGSSIGDANIIHRKCEDQNGPC
AGPDKSFSSNLSVICSSQKSAESRLSINIDKANDKPLDNDEKEKQPISNLVQELNEHPIG
CVTPTAPRTTSHRNRFTSISRAFGDGSKLLPEDHVLTGFAGGSKKPRSQVSYSVSPKSEE
LGIKNKGHFRKIQSHVSAKINDAKKLPDSSRSGHSSPESLTCVANVLVTVGDRGWREYDT
QITMDSDGQSERRICVKLAEGTKYAHKVCQVLQPGATNRYTHAMMWKGGAEWCLEFPDRS
QWLIFKQMHDECYSHNIRAASVRNIPIPGVHLVEIHDDNDVVSFVQSEAYLVHIGTDVEI
ALDQSRVLYDMDSDDEEWISSWRKSLVRDNTTTLQFAEDLFERVMDKLEKFAYSHNCNGL
SIDQMKELETDDVPLHTIEVIHAYWQDKRQKRGMPLIRHFQSAMWKIYEQQLHEWESKVC
RMQSSSNGYQEKKLPPKPALFAFCLRPRGLHVPYKGPKQRSHKKLMSTGCHSFSREHDGF
YRQVSGRRYNECTGDGRISESYDTGSLYSPTGYSPRFSTRTDSPRAFESSERSSTPRFSR
NNSSTKRSAALAFSDDHQPSPSCRPQRAKRSAHDHWNAAIHDWQNSKHLFPGSSRVDVEE
LKLRDAAGAAQHAAAMARLKREKAHCLMQKADLALHRATVALMIADAIKSSGRDTTRDGR
RDSRNEER

Transcript Sequence

Transcript ID

Zm00001d008763_T027
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:19451005:19456818:1 gene:Zm00001d008763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Enhancer of polycomb-like transcription factor protein
Sequence

AGAATACCTTGTACTTCGATCAGATTTCAGATATCTGGTGGGCATGGTAGAAGCGAAGTA
GTATTTATGTTATTCAACTTTGTTGGTGTAGAGAAATCGAAATGGGAACACCTTCAAGGA
AAGCTTCAATATCACTGTTCTAAATCGGAGTTGTCTAAAGATTCCACAAAATGTACTGGT
CGAAGAGCCCTTTCTTCAATGGATCTCTTCTCCAAGGTATCTTCCTGCCTTACATATGCA
GTTTTAATTGATCTTTCCACATGGCTATCATAATTGCATTCCAAGGATTTAAACAAACAG
CGGCATTAACATTACTCTGCAGTAGCACCCCCTTATGATGACTTTATTTTGTACATACAA
TTTATGTGATGTTATCCGTAACCAGAGATTTTGAGGAACCACAGTGATGGATGGTCATCG
CTCTCTTACCCTATGTAATCTATGTTGTATTTTATTCATTGTTTAAACTGTGTAAAAACA
CACCTTTGGAAGATTAGTTATGTTACAGTTACAATTCATGAATCGATATTTATTCCACAA
GGCGTGGTTAGGCGCTTGCCTAGGCGCGCGTTAAGTCCTGGGTGGAGAATAGGTGGAGGT
ATAGGTGCTGTGCCACCAGATCCAGAGCTGCGCTGCCTGAGGGAGGGAGCCAAAGGGAAA
GGGATTGAGGTCTTGATGCTGCGGGGAGCGCATAAGATGGCGTCAATCTTTGTGGCAGCG
CACTGACATTGCATTGGATTGCATGTGCTGCCCTCCATAGGACGGAGGGAGGGAGCAATT
TTGTGTTTTCTCCTTCACTTTTCTAACAAATCCTAGTGATTTGTATACTTCTACTATCAT
TCCGTTTACTGATTCCTTGCATTCTAGTTCCTAAAACTTCTATTTTCTCACAAGATAGTA
TTAGTTATACTTTTATTTGATATTTCTCTTGTAACCTCCTCTCTGGTACTGTTGGAACAA
GAATTACACATACACATGTTGGTGTTTAATTTATAGTTAGTCAATTGCATAACTGATGTG
AACACCTAAAGAAAGCCTAGGCATGCTTAACCTCTAGGCAAAAGGTCACCGTCTAGAGAG
TTCCTAGTGCATTTTTAACCTTGAATATTATTTCCCATGTATTTGCATTAATACTCTTAA
TGTGCATCGTAATGCGTGTTTTATTCTGTTTAAGGTTGAAACTGTATCTGTTCTTTGTTT
CTGAAAGCCAGACTGCCAGGGTGAAGAATTTTTACTTATCTAGCCGGGTTTCCACTTCTT
GTCAATGATTTAGTACTGTCATTGCTGTTGTATGTGCAGTCTCTTATTAATTATTATCCT
TCTGTTGTAATCATAACCCTCCATCCTGTTATTTCTTGTCAAGTTATATATAAAACTGCG
ACGTACAACACATTATGTTGTGCCGGACTGCCGGTTCTTCATGTGATTCATATGTGAATG
TGAATTGTTGTTCAATGGAAATACACATTTAAACTGCTGTTTGTTTATTGATTTGTTAAC
ATACACTGCTCTAAAAACATTGTGCTAGAACTCTATTTTTGTATAAAATCAACTGATCAT
TGTTTAAATATTTCTGTTAAACAGGGTTTTGATGTTCAGGACTTTCTTCCAGAGTCTAAT
TATTCAGATCGCGAACCTATCATTTGTTGTTTGGATGAACATTGTAGATTTACTCAAAGT
GTTCTGGACATGACAACTGCACCTTCACTACTGCCTTGGCACCATAAAAAAATGTTAACA
GAAAGCAATTTGACTAATGGTTCTCAGCAATCCATGTCATGTACTTTGGATGAGGATCAG
CAGCAGTTGGTAACAGAACATGCATCTGACACAGTTTTTCATGCTCCACCTCAAGTTTGT
TCACTTAATCTCGGTTCATCACCTGATAGTCCATTGGATATGGCTTCTGCTAGTTGTGCA
AATCCATCTAGCTCTGCTAGTAGGGAATCCAATATTGCTGAAAGGAATGTAAGCACAGAA
TGTAATGGCAGCAGTATTGGTGATGCAAATATAATTCACAGGAAGTGTGAAGATCAAAAT
GGGCCTTGTGCTGGTCCTGACAAGTCATTTTCCTCCAACCTTAGTGTTATTTGCTCTTCA
CAGAAGTCTGCAGAGAGTCGTCTTTCCATAAATATTGACAAAGCAAATGATAAACCTCTT
GACAACGATGAAAAAGAAAAGCAACCTATATCTAACTTGGTTCAGGAATTGAATGAACAT
CCAATTGGCTGTGTTACACCTACTGCCCCTAGAACTACTTCCCATAGGAACCGGTTTACA
TCTATATCACGTGCTTTTGGAGATGGTTCAAAATTACTGCCAGAAGACCACGTGTTGACT
GGCTTTGCTGGTGGTTCTAAGAAACCACGAAGTCAAGTTTCATACTCAGTTTCTCCTAAA
AGTGAGGAACTTGGCATAAAAAACAAAGGTCATTTCCGCAAGATACAATCTCATGTTAGT
GCAAAGATAAATGATGCAAAGAAACTTCCTGATAGTTCTAGAAGTGGGCATAGCAGCCCG
GAGTCATTGACTTGCGTTGCAAATGTTCTTGTTACAGTGGGTGATAGAGGTTGGAGGGAG
TATGATACCCAGATCACAATGGATTCCGATGGTCAGAGTGAAAGGAGGATATGCGTGAAA
CTTGCTGAAGGGACCAAGTATGCTCACAAGGTCTGTCAAGTTTTGCAGCCTGGGGCCACA
AACCGCTATACACATGCCATGATGTGGAAAGGTGGTGCTGAATGGTGCCTGGAATTTCCT
GACAGAAGCCAGTGGTTGATTTTCAAGCAAATGCACGATGAGTGCTATAGCCATAACATC
AGAGCTGCTTCTGTGAGAAACATTCCAATCCCTGGTGTCCATTTGGTTGAAATCCATGAT
GATAATGATGTGGTATCCTTTGTGCAATCTGAAGCTTATCTTGTTCACATCGGAACAGAT
GTTGAAATTGCTCTTGATCAATCCCGTGTGTTATATGACATGGACAGCGATGATGAAGAG
TGGATATCAAGCTGGCGGAAATCCTTAGTAAGAGACAACACCACCACACTTCAGTTTGCA
GAAGATTTGTTTGAGAGGGTTATGGACAAACTAGAGAAGTTTGCATATAGCCACAACTGT
AATGGACTCAGCATTGATCAGATGAAGGAACTGGAGACTGATGATGTACCTCTGCACACT
ATTGAAGTGATACATGCATATTGGCAAGACAAGAGGCAGAAAAGGGGAATGCCACTTATT
CGACATTTTCAGTCGGCTATGTGGAAGATCTACGAGCAGCAGCTGCATGAATGGGAATCA
AAAGTATGCAGAATGCAGAGTTCGTCAAATGGGTACCAAGAAAAGAAATTGCCTCCCAAG
CCTGCATTGTTTGCCTTCTGTTTGAGGCCTCGTGGACTCCATGTACCATACAAGGGGCCA
AAGCAGCGTTCTCATAAGAAGCTTATGTCCACAGGCTGCCATAGCTTTTCAAGAGAGCAT
GATGGCTTTTACCGGCAAGTATCAGGCAGGAGATACAATGAATGCACTGGGGATGGGAGG
ATAAGCGAATCGTATGACACTGGTTCTCTTTACTCCCCAACAGGGTACTCTCCCAGGTTC
TCTACAAGAACAGATTCTCCTCGGGCATTCGAGTCCTCAGAACGAAGCTCCACACCAAGA
TTTTCCAGGAACAACAGTAGCACCAAAAGGAGCGCAGCCCTTGCTTTCTCCGACGACCAC
CAGCCATCACCTTCCTGCCGCCCCCAGAGAGCGAAACGGAGCGCGCACGACCACTGGAAC
GCTGCTATCCACGACTGGCAGAACTCGAAGCACCTCTTCCCGGGCTCCTCCCGCGTCGAC
GTCGAGGAGCTGAAGCTGCGGGACGCCGCGGGCGCAGCGCAGCACGCCGCCGCCATGGCG
AGGCTCAAGAGGGAGAAGGCCCACTGCCTGATGCAGAAGGCTGACCTCGCCCTCCACAGG
GCCACGGTAGCCCTCATGATTGCCGACGCGATCAAATCATCTGGCAGGGACACGACCCGG
GACGGCCGAAGGGATTCGAGGAACGAGGAGCGCTGACTCCCCTATTTTTTTGGGCCTTTT
GCCGTGAGCCCTTGGCGCATGCATGCATACAGCTTGATCTCGACTCATCGTTTCCTGATG
GTAGGAGTGCCATTTGGTCGAGTCAGTAGATAGCATCATTTCCCCTTTTGTTTTCTCCTT
TGAATCTCCAGTGTCCTGTACATAGTATTTTTTTCCCCTTCCTTTTTGCCCTTTTTAGAC
CTCCCGGTTAATCTTTTTGCCCGGTGAAGAATGGGCCAGGGTGTAGGTTCAGCTATCTGT
TGGTACAATCTAGCGTTTTGTCTGAATAGCGGCTATGTTGTCTCATGGTTGAGTCACCCC
ATAGACTGGCTTCGTTTGGGCCTTTGGGAGAGATGAATGAAAGGCACACAGTATAGTACA
GGATGTTAGTGCCTTC