Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008743_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:8:18842097:18850938:1 gene:Zm00001d008743 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase
Sequence	ATGGACCTGCAGCAGCTAGACAATGGTGTTATTGTGCCTCCTACTGGATGGAAGTGTAGC AAATGCGATAAAACTGAGAACCTCTGGCTGAATTTAACTGATGGTATGATCCTTTGTGGG AGGAAGCTCTGGGATGGAAGTGGTGGGAATAATCATGCCATTGAACATTATGAACAGACT AAATACCCTCTTGCGGTGAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGATGTT TTCTCGTACCCTGAAGATGATAGTGTTGAAGATCCGCTATTAGCTCAGCACTTATCACAT TTTGGTATCGATTTTTCTTCACTCCAAAAGACTGAGATGACTACTGCTGAGAGGGAACTT GATGCTAACACAAATTATGACTGGAATAGAATACAAGAAAGTGGAAAAGACGCTGAGCTT CTGTTTGGACCCGGCTATACTGGTCTTGCGAATCTTGGGAATAGTTGCTATATGGCTTCA ATAATGCAAGTCATGTTTTCAATCCATCCTTTCATATCAAGGTACTTCGAGAAACAGAGT TTGAAAGCTGCATTTGCAACTGCACCCGCTGATCCAACAGTAGACCTAAACATGCAACTG ACAAAACTAGCGCATGGTTTGCTCTCTGGTAAATATTCTGCTCCAGCAAAGGAGGGGCAA GAAGGGATACGTTCTCGCATGTTTAAGTCAGTTATCACTGCGAACCATCCTGAATTTTCA AGCATGAGACAACAGGATGTCCTTGAATTCTTCCTTCACCTTATTGACAGAGTTGAGAAG GCAAACCCTGGAGACCGTGAGCTAAATCCTTTTTCCGGTTTCAAGTTTGTTGTTGAAGAG AGGGTTCAGTGCCCTTCTGGGAAGGTTTCTTACAACAAACGATCTGACAACGTTCTTTCT TTGAGCATACCACTGCATGAGGCAACTAATAAAGAGCAGCTAGAAGCTTTTAATGAGAAG AAAGCTGCAATGAACTTGGATGGAAAAGAAGTGTCTAATGAGGATATTGTCAGGCCTAGA GTCCCATTGGAGGCATGCTTGTCAAGTTTTTCAGGGCCAGAGGAGATTCCAGATTTTTAT AGCACTGCATTAAATTCAAAGACTACCGTCACTAAGACAGCTGGTTTCACTACCTTTCCT GATTACCTTGTGCTGCACATGCGTAAGTTTGTAATGGAAACAGGATGGGTGCCAAAGAAA CTCGATGTTTATATAGATGTGCCAGATACAATTGATATCACACATATGCGCAGCAAAGGA TTACAGCCTGGGGAAGAGCTGCTACCTGAAGGAGGTTCTGGTGACGACAGTGCCGAGCCT GCTAATCCTGTTGCCAGTGAGGATATTGTAACCCAGCTTGCAAGCATGGGCTTCAACTAC CTTCATTGTCAGAAAGCTGCTATTAACACATCAAACACAGGAGTTGAGGAAGCGATGAAT TGGCTCCTCTCGCACATGGATGATCCAGATATAAACGACCCAATATCAAAAGATTCACGT GCTTATGAGCCATCTGTTGACGAAGCAAGTGTTCAAACTCTCATCTCCTTTGGATTCCAG GAAGACATTGCCATAAAGGCCCTGAAAGCTTCTGGTGGTAATATCGAGAAAGCTACAGAC TGGATTTTCAGCCACCCCGAAGCATCTACCTCAGCATCTGCTGATTCTTCCACTAGCAAT GTAAATGCTGATGACACATATATTCCAGATGGAAGTGGCAGATACAAGCTGATGGCGTTC GTGAGCCATATGGGCACCTCTACCCACTGCGGGCACTACGTAGCTCATGTCCTCAAAGAC GGGAGGTGGACAATCTTTAACGACAGCAAGGTCGCAGTATCTGTTGACCTGCCCAAGGAA ATGGGCTACCTCTATTTCTTTCAGAGGATTAGCAACTAG

Peptide Sequence

PEP ID	Zm00001d008743_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:8:18842097:18850938:1 gene:Zm00001d008743 transcript:Zm00001d008743_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase
Sequence	MDLQQLDNGVIVPPTGWKCSKCDKTENLWLNLTDGMILCGRKLWDGSGGNNHAIEHYEQT KYPLAVKLGTITADLEAADVFSYPEDDSVEDPLLAQHLSHFGIDFSSLQKTEMTTAEREL DANTNYDWNRIQESGKDAELLFGPGYTGLANLGNSCYMASIMQVMFSIHPFISRYFEKQS LKAAFATAPADPTVDLNMQLTKLAHGLLSGKYSAPAKEGQEGIRSRMFKSVITANHPEFS SMRQQDVLEFFLHLIDRVEKANPGDRELNPFSGFKFVVEERVQCPSGKVSYNKRSDNVLS LSIPLHEATNKEQLEAFNEKKAAMNLDGKEVSNEDIVRPRVPLEACLSSFSGPEEIPDFY STALNSKTTVTKTAGFTTFPDYLVLHMRKFVMETGWVPKKLDVYIDVPDTIDITHMRSKG LQPGEELLPEGGSGDDSAEPANPVASEDIVTQLASMGFNYLHCQKAAINTSNTGVEEAMN WLLSHMDDPDINDPISKDSRAYEPSVDEASVQTLISFGFQEDIAIKALKASGGNIEKATD WIFSHPEASTSASADSSTSNVNADDTYIPDGSGRYKLMAFVSHMGTSTHCGHYVAHVLKD GRWTIFNDSKVAVSVDLPKEMGYLYFFQRISN

Transcript Sequence

Transcript ID	Zm00001d008743_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:18842097:18850938:1 gene:Zm00001d008743 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase
Sequence	GGTTAGGCTTGCGGTTGATAAAGTTTTACTTGCTGAAAGTGCTGATAGAAAAGAACAACT GGCTGCTTGGGTTGCTGACAAAAAGAACATTAGTGCATATGCTATGGACCTGCAGCAGCT AGACAATGGTGTTATTGTGCCTCCTACTGGATGGAAGTGTAGCAAATGCGATAAAACTGA GAACCTCTGGCTGAATTTAACTGATGGTATGATCCTTTGTGGGAGGAAGCTCTGGGATGG AAGTGGTGGGAATAATCATGCCATTGAACATTATGAACAGACTAAATACCCTCTTGCGGT GAAGCTTGGAACAATTACTGCTGATTTGGAAGCGGCAGATGTTTTCTCGTACCCTGAAGA TGATAGTGTTGAAGATCCGCTATTAGCTCAGCACTTATCACATTTTGGTATCGATTTTTC TTCACTCCAAAAGACTGAGATGACTACTGCTGAGAGGGAACTTGATGCTAACACAAATTA TGACTGGAATAGAATACAAGAAAGTGGAAAAGACGCTGAGCTTCTGTTTGGACCCGGCTA TACTGGTCTTGCGAATCTTGGGAATAGTTGCTATATGGCTTCAATAATGCAAGTCATGTT TTCAATCCATCCTTTCATATCAAGGTACTTCGAGAAACAGAGTTTGAAAGCTGCATTTGC AACTGCACCCGCTGATCCAACAGTAGACCTAAACATGCAACTGACAAAACTAGCGCATGG TTTGCTCTCTGGTAAATATTCTGCTCCAGCAAAGGAGGGGCAAGAAGGGATACGTTCTCG CATGTTTAAGTCAGTTATCACTGCGAACCATCCTGAATTTTCAAGCATGAGACAACAGGA TGTCCTTGAATTCTTCCTTCACCTTATTGACAGAGTTGAGAAGGCAAACCCTGGAGACCG TGAGCTAAATCCTTTTTCCGGTTTCAAGTTTGTTGTTGAAGAGAGGGTTCAGTGCCCTTC TGGGAAGGTTTCTTACAACAAACGATCTGACAACGTTCTTTCTTTGAGCATACCACTGCA TGAGGCAACTAATAAAGAGCAGCTAGAAGCTTTTAATGAGAAGAAAGCTGCAATGAACTT GGATGGAAAAGAAGTGTCTAATGAGGATATTGTCAGGCCTAGAGTCCCATTGGAGGCATG CTTGTCAAGTTTTTCAGGGCCAGAGGAGATTCCAGATTTTTATAGCACTGCATTAAATTC AAAGACTACCGTCACTAAGACAGCTGGTTTCACTACCTTTCCTGATTACCTTGTGCTGCA CATGCGTAAGTTTGTAATGGAAACAGGATGGGTGCCAAAGAAACTCGATGTTTATATAGA TGTGCCAGATACAATTGATATCACACATATGCGCAGCAAAGGATTACAGCCTGGGGAAGA GCTGCTACCTGAAGGAGGTTCTGGTGACGACAGTGCCGAGCCTGCTAATCCTGTTGCCAG TGAGGATATTGTAACCCAGCTTGCAAGCATGGGCTTCAACTACCTTCATTGTCAGAAAGC TGCTATTAACACATCAAACACAGGAGTTGAGGAAGCGATGAATTGGCTCCTCTCGCACAT GGATGATCCAGATATAAACGACCCAATATCAAAAGATTCACGTGCTTATGAGCCATCTGT TGACGAAGCAAGTGTTCAAACTCTCATCTCCTTTGGATTCCAGGAAGACATTGCCATAAA GGCCCTGAAAGCTTCTGGTGGTAATATCGAGAAAGCTACAGACTGGATTTTCAGCCACCC CGAAGCATCTACCTCAGCATCTGCTGATTCTTCCACTAGCAATGTAAATGCTGATGACAC ATATATTCCAGATGGAAGTGGCAGATACAAGCTGATGGCGTTCGTGAGCCATATGGGCAC CTCTACCCACTGCGGGCACTACGTAGCTCATGTCCTCAAAGACGGGAGGTGGACAATCTT TAACGACAGCAAGGTCGCAGTATCTGTTGACCTGCCCAAGGAAATGGGCTACCTCTATTT CTTTCAGAGGATTAGCAACTAGGCACGTCACACACAATGGAAAGAATGGTGGGCTGTTAG GATACTGTCTTGCTGATTTTAAAGCGAACGTTTACTCACATCCTGCCATGCTGGTTACTG AATGGTCAACCGGGATATTTGCTTTTTTGTTCCTTGAGACCTCGATTGGCATCTTCCGGT TACATCTGTGTTTTTTTTATTACTGATTTGCATTGGTGGTTGTCTTGTGTT