Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008739_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:18568768:18573047:-1 gene:Zm00001d008739 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-hydroxyacyl-CoA lyase
Sequence	ATGCCTAAACAAGCCGCACTCGGCTGCGCCTATGCGCTGCGTCGGGCAGAGACGAAGACA AGCAGGACGTCTTTTCGGCGGACAGCGGACTTCACCGCATACACCGCTACCCGCGCGCAG CCGCGCAGGTGCATCTGCGCCGCCGCCGGCCCGCCGCACCCGCACGTCTCCTTATACCCA TCCGGCCATCTACACACTGCAGTCCACGCTCGTGGCACCGCACTCACTCCGAATTCTGAA GCAACAAACACCAGAAGCGCACCAACTCCCCAACCACCGGAGACCGCACCCCAGCAAAGG ATGGCATCTGACTCCACGGCCGCCGTGACGGTGGACGGCAGCGCGCTTGCGGGGCGCGCG CTGGCCGCGGCGGGCACGCGGCACATGTTCGGGGTGGTGGGCATCCCCGTCACCTCCCTC GCGTCCCGTGCCGCCGCGGCCGGGGTCCGCTTCCTCGCCTTCCGCAACGAGCAGTCCGCG GGGTACGCCGCCGCCGCCTACGGCTTCCTCACGGGCTCCCCGGGCGCCCTACTCACCGTC TCCGGCCCAGGATGCGTCCACGGGCTCGCGGGCCTCTCCCACGCCACCGCCAACGCCTGG CCGCTCCTCATGATCTCCGGATCCTGCGACCAGGCTGACGCCGGCAGGGGCGACTTCCAG GAGCTCGACCAGATCGCCGCCACTAAGCCCTTCGTCAAGCTCGCCGTCAAGGCAACAACC ATCGCCGACATCCCGCGCCTCGTCTTCCAGGCCCTCGCCGCCGCCGTGTCCGGCCGTCCC GGAGGGTGCTACCTCGATATCCCGTCCGATGTCCTCCACCAAACCCTCCCTGAATCCGAG GCCGCGGCTCTCATAGCAGCAGCAGCCGCCAATTCGGCCGCATCCGATCCTTCCCCGTCA AAGCACAAGACTCTTGACGAGGGAATCGCGAAAGCTGCGGACCTGCTCCGGTGTGCGGAG CGGCCTCTTGTTGTGATTGGGAAGGGTGCGGCGTATGCGCGCGCGGAGGAGGCGATTCGG AAGCTGGTGGACACCACGGGCATCCCCTTCCTCCCGACGCCGATGGGGAAAGGGGTCGTG CCTGACTCGCATCCACTCTCCGCCACGGCGGCACGCTCACTCGCCATCGGGCAGTGTGAT GTGGCTCTGGTCATCGGTGCTAGGCTTAATTGGTTGCTTCACTTTGGCGAGCCACCCAAG TGGTCCAAGGATGTTAAGTTCATTCTTGTTGACGTCTCCGAGGAGGAGATTGAGCTCCGG AAGCCACATGTGGGGATTGTTGGGGACGCGAAGAGAGTAACTGAGCTGATCAACCGGGAG ATCAAGGACAATCCATTCTGCCTGGCAAGGTCGCACCCATGGGTCGAAGCGATCACTAAG AAGGCCAATGACAATGTTCTTAAGATGGAGGCGCAGCTAGTGAAGGATGTTGTGCCATTC AATTTCATGACACCATTGCGGATCATCCGGGATGCGATCCTTGCCGAGGGGAGTCCTGCT CCAATAGTGGTCTCAGAAGGGGCAAATACCATGGATGTTGGCAGGGCTGTGCTTGTGCAG AATGAACCAAGGACAAGACTGGATGCAGGGACATGGGGGACGATGGGGGTTGGATTGGGG TACTGTATTGCGGCTGCAGCAGCTGAACCTGAACGACTCGTGGTTGCTGTGGAGGGCGAT TCTGGATTTGGCTTCAGTGCAATGGAGGTTGAGACGTTGGTGAGGTACCAGCTGCCTGTT GTTGTAATCGTTTTCAACAACAACGGTGTCTACGGCGGGGACCGGAGAAGCCCTGACGAG ATAACCGGACCCTACAAAGGTGACCCAGCCCCAACCTCATTTGTTCCGGCAGCAGGGTAC CATAAGATGATGGAGGCTTTTGGAGGGAAAGGGTATCTTGTGGAGACACCAGACGAGCTC AAATCTGCCCTTTCAGAATCGTTCCGCGCCAGGAAACCGGCGGTGATTAATGTTATCATT GATCCTTACGCCGGCGCAGAGAGCGGTCGAATGCAGCACAAGAACTGA

Peptide Sequence

PEP ID	Zm00001d008739_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:18568768:18573047:-1 gene:Zm00001d008739 transcript:Zm00001d008739_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-hydroxyacyl-CoA lyase
Sequence	MPKQAALGCAYALRRAETKTSRTSFRRTADFTAYTATRAQPRRCICAAAGPPHPHVSLYP SGHLHTAVHARGTALTPNSEATNTRSAPTPQPPETAPQQRMASDSTAAVTVDGSALAGRA LAAAGTRHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQSAGYAAAAYGFLTGSPGALLTV SGPGCVHGLAGLSHATANAWPLLMISGSCDQADAGRGDFQELDQIAATKPFVKLAVKATT IADIPRLVFQALAAAVSGRPGGCYLDIPSDVLHQTLPESEAAALIAAAAANSAASDPSPS KHKTLDEGIAKAADLLRCAERPLVVIGKGAAYARAEEAIRKLVDTTGIPFLPTPMGKGVV PDSHPLSATAARSLAIGQCDVALVIGARLNWLLHFGEPPKWSKDVKFILVDVSEEEIELR KPHVGIVGDAKRVTELINREIKDNPFCLARSHPWVEAITKKANDNVLKMEAQLVKDVVPF NFMTPLRIIRDAILAEGSPAPIVVSEGANTMDVGRAVLVQNEPRTRLDAGTWGTMGVGLG YCIAAAAAEPERLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNNGVYGGDRRSPDE ITGPYKGDPAPTSFVPAAGYHKMMEAFGGKGYLVETPDELKSALSESFRARKPAVINVII DPYAGAESGRMQHKN

Transcript Sequence

Transcript ID	Zm00001d008739_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:18568768:18573047:-1 gene:Zm00001d008739 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-hydroxyacyl-CoA lyase
Sequence	GAGACGTTGACCCGTTTTGACCGGAGAAGCAAACTATGCCTAAACAAGCCGCACTCGGCT GCGCCTATGCGCTGCGTCGGGCAGAGACGAAGACAAGCAGGACGTCTTTTCGGCGGACAG CGGACTTCACCGCATACACCGCTACCCGCGCGCAGCCGCGCAGGTGCATCTGCGCCGCCG CCGGCCCGCCGCACCCGCACGTCTCCTTATACCCATCCGGCCATCTACACACTGCAGTCC ACGCTCGTGGCACCGCACTCACTCCGAATTCTGAAGCAACAAACACCAGAAGCGCACCAA CTCCCCAACCACCGGAGACCGCACCCCAGCAAAGGATGGCATCTGACTCCACGGCCGCCG TGACGGTGGACGGCAGCGCGCTTGCGGGGCGCGCGCTGGCCGCGGCGGGCACGCGGCACA TGTTCGGGGTGGTGGGCATCCCCGTCACCTCCCTCGCGTCCCGTGCCGCCGCGGCCGGGG TCCGCTTCCTCGCCTTCCGCAACGAGCAGTCCGCGGGGTACGCCGCCGCCGCCTACGGCT TCCTCACGGGCTCCCCGGGCGCCCTACTCACCGTCTCCGGCCCAGGATGCGTCCACGGGC TCGCGGGCCTCTCCCACGCCACCGCCAACGCCTGGCCGCTCCTCATGATCTCCGGATCCT GCGACCAGGCTGACGCCGGCAGGGGCGACTTCCAGGAGCTCGACCAGATCGCCGCCACTA AGCCCTTCGTCAAGCTCGCCGTCAAGGCAACAACCATCGCCGACATCCCGCGCCTCGTCT TCCAGGCCCTCGCCGCCGCCGTGTCCGGCCGTCCCGGAGGGTGCTACCTCGATATCCCGT CCGATGTCCTCCACCAAACCCTCCCTGAATCCGAGGCCGCGGCTCTCATAGCAGCAGCAG CCGCCAATTCGGCCGCATCCGATCCTTCCCCGTCAAAGCACAAGACTCTTGACGAGGGAA TCGCGAAAGCTGCGGACCTGCTCCGGTGTGCGGAGCGGCCTCTTGTTGTGATTGGGAAGG GTGCGGCGTATGCGCGCGCGGAGGAGGCGATTCGGAAGCTGGTGGACACCACGGGCATCC CCTTCCTCCCGACGCCGATGGGGAAAGGGGTCGTGCCTGACTCGCATCCACTCTCCGCCA CGGCGGCACGCTCACTCGCCATCGGGCAGTGTGATGTGGCTCTGGTCATCGGTGCTAGGC TTAATTGGTTGCTTCACTTTGGCGAGCCACCCAAGTGGTCCAAGGATGTTAAGTTCATTC TTGTTGACGTCTCCGAGGAGGAGATTGAGCTCCGGAAGCCACATGTGGGGATTGTTGGGG ACGCGAAGAGAGTAACTGAGCTGATCAACCGGGAGATCAAGGACAATCCATTCTGCCTGG CAAGGTCGCACCCATGGGTCGAAGCGATCACTAAGAAGGCCAATGACAATGTTCTTAAGA TGGAGGCGCAGCTAGTGAAGGATGTTGTGCCATTCAATTTCATGACACCATTGCGGATCA TCCGGGATGCGATCCTTGCCGAGGGGAGTCCTGCTCCAATAGTGGTCTCAGAAGGGGCAA ATACCATGGATGTTGGCAGGGCTGTGCTTGTGCAGAATGAACCAAGGACAAGACTGGATG CAGGGACATGGGGGACGATGGGGGTTGGATTGGGGTACTGTATTGCGGCTGCAGCAGCTG AACCTGAACGACTCGTGGTTGCTGTGGAGGGCGATTCTGGATTTGGCTTCAGTGCAATGG AGGTTGAGACGTTGGTGAGGTACCAGCTGCCTGTTGTTGTAATCGTTTTCAACAACAACG GTGTCTACGGCGGGGACCGGAGAAGCCCTGACGAGATAACCGGACCCTACAAAGGTGACC CAGCCCCAACCTCATTTGTTCCGGCAGCAGGGTACCATAAGATGATGGAGGCTTTTGGAG GGAAAGGGTATCTTGTGGAGACACCAGACGAGCTCAAATCTGCCCTTTCAGAATCGTTCC GCGCCAGGAAACCGGCGGTGATTAATGTTATCATTGATCCTTACGCCGGCGCAGAGAGCG GTCGAATGCAGCACAAGAACTGAAGGCGCTTGCTTGGCTTTTGTACCATACCATAGCAGG ATGCAGATGCGACTTGATACAAATAAGCAGCAACCGTCAATCAATCCTTTTGTTTCTTTT TTACGACCTCGCTTCGTTGTTCGTGATACAGACGTGGGGCGCTTTTAATTGGAAGTCCCA TTTGAAGGCATGTGAATGTGTTATGATTATCTAAATGCCACGATGCAAACTTTAAAGGCA TGTTGATGAGGATGTGTAGAAAACCTGTGCCCATATATGAGCCGGTATAATTATTTCTCA AAGTAATAAAGTCAGCGTTTTAAGGCCTGT