Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008700_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:17394724:17398865:-1 gene:Zm00001d008700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vanishing tassel2 description: vanishing tassel2
Sequence	ATGCCTTCGGCGGCATTAAATCTCGGCACGGCGGTCGAGGGCAGCTTCCAAGGCGCCGGC GGCGGCATGGTGCCGTCCGCGCGCCTCCTCACCGCTAACGGCGGCGGCGCGCCGAGCCGT CGGGAGGAGACGGCCAACGGCGGAGGGCCTGGCTCTGACCTGGCCGCGCTCCGGCCCACC AAAAGGCCGCGCGGGAAAGCCCAGCTGGCCGGGAAGCCCAGGAGGCGGGCGCCGATCTGG AACCTGCAGGCCGCCGTCTTCGTCTCTGTCGTCCTCAACGTCGGCCTCCTCCTCCAGCAC CACGTCAACAGCACAGCTCCGTCGCACCACGACCACGACCACGGGCACCGGCAGGAGCAC CAGGCCTGCCCGACGCATCTAGACGGTGGCGGCGTCAGCCGCAGCAGTAGGGGGAGGCAG GAGGTGGAGGCGGCGGCGTCGGCGGCGTCCGTGCCCAAGGCCGCCGGGGCGCCGTCCACC GGCAAGCCGCCGGTGACGCCGGACTCGGTGATCAACCTCGACCACGGCGACCCGACCATG TTCGAGGAGTTCTGGCGGGGGACGGGGGCCGCCGCGGAGATCGTGATCCCGGGGTGGCAG ACCATGAGCTACTTCTCGGACGTGGGCAACGTGTGCTGGTTCCTGGAGCCCGGGCTGGAC CACGAGGTGCGGCGGCTGCACCGCCTGGTCGGCAACGCCGCCGTGGACGACGGCTACCAC GTCCTCGTCGGCACCGGCTCCACGCAGCTCTTCATGGCCGCGCTCTACGCGCTGTCGCCG CCCGCCGCCGCGCCCATGAGCGTCGTGTCCGCGGCGCCGTACTACTCGTCCTACCCGGCC GTGACGGACTTCCTCCAGTCGGGGCTGTTCCGGTGGGCCGGCGACGCCAGCTCGTTCACG GGCGACGCCTACATCGAGCTGGTGTGCTCGCCGAACAACCCCGACGGCGCCATCCGCGAG GCCGTCCTGCCCTCCGGCGGCTCCGGCGTAGCGGTCCACGACCTGGCCTACTACTGGCCG CAGTACACGGCCATCACCAGACGGGCCGACCACGACATCATGCTCTTCACCGTGTCCAAG AGCACGGGCCACGCCGGCACGCGGATCGGGTGGGCGCTGGTGAAGGACCGCGACGTCGCC AAGAGGATGGCCAAGTTCATCGAGCTCAACACGATCGGGGTCTCCAAGGACTCGCAGCTG CGCGCCGCCAAGGTGCTCGGCGCGGTCTCCGACGCCTACGAGCTCCCGGAGGCGGCCCAG CACCGCCTGTTCGACTACGGGCGGCGCAAGATGGTGGAGCGCTGGCGCGTGCTGCGCGAG GCGGCCGCCGCCTCGGGCGCCTTCAGCCTGCCCCACGAGACCTCGGCCTTCTGCAACTTC ACCAAGGAAACGGCTGCCACTAACCCCGCGTTCGCGTGGCTGCGCTGCGACAGGGAGGAC GTGGAGGACTGCGCGAGCTTCCTGCGCGGCCACGGGATCCTGACGCGGAGCGGGAGCCAG TTCGGCGCGGACCCGAGGTACGTCCGGGTCAGCATGCTCGACCGGGACGATGCCTACGAC ATCTTCGTCAAGCGCCTCTCCTCCCTGCACTGA

Peptide Sequence

PEP ID	Zm00001d008700_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:17394724:17398865:-1 gene:Zm00001d008700 transcript:Zm00001d008700_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vanishing tassel2 description: vanishing tassel2
Sequence	MPSAALNLGTAVEGSFQGAGGGMVPSARLLTANGGGAPSRREETANGGGPGSDLAALRPT KRPRGKAQLAGKPRRRAPIWNLQAAVFVSVVLNVGLLLQHHVNSTAPSHHDHDHGHRQEH QACPTHLDGGGVSRSSRGRQEVEAAASAASVPKAAGAPSTGKPPVTPDSVINLDHGDPTM FEEFWRGTGAAAEIVIPGWQTMSYFSDVGNVCWFLEPGLDHEVRRLHRLVGNAAVDDGYH VLVGTGSTQLFMAALYALSPPAAAPMSVVSAAPYYSSYPAVTDFLQSGLFRWAGDASSFT GDAYIELVCSPNNPDGAIREAVLPSGGSGVAVHDLAYYWPQYTAITRRADHDIMLFTVSK STGHAGTRIGWALVKDRDVAKRMAKFIELNTIGVSKDSQLRAAKVLGAVSDAYELPEAAQ HRLFDYGRRKMVERWRVLREAAAASGAFSLPHETSAFCNFTKETAATNPAFAWLRCDRED VEDCASFLRGHGILTRSGSQFGADPRYVRVSMLDRDDAYDIFVKRLSSLH

Transcript Sequence

Transcript ID	Zm00001d008700_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:17394724:17398865:-1 gene:Zm00001d008700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vanishing tassel2 description: vanishing tassel2
Sequence	CTCGTCTAGCTGGTCCCTGCTGCAGCACTAAGCTTAGCTTAGCTTTGAGAGCTTCTCCAT TGTTTGCAGCACTGCTAATAAAGTGCTGCCGCTCTTTTCTCTCCTCTCCTCTGCTCTCCT AGCTATACGTTCTTTCTTCCTTACAGTACCCACTGCTGCTGTTCAGCTGAGCTAATGCAG TGTTAAGCTCAGTTACTGTCGTCGGTTTCAGCAAAAGCCTCGCAGTGTACTTGCGCCTGA ACCTGACGAGAAAGAGAGCGAGGTCAAAACAGAGGGGAACCAAAGCTCCAAGAAAGGGGA GGGACCTTCTTCGACCCGCTTCCATCCAGCATCTCGCTCGTCCGCCGCTCGAGGTCCTTC CTAATCGGCGGCCAGCCAGCCAGCCGCAGCCGCCTCCTTTGGCAAGAAGGACACTAGTTC CACCTGTTTTCTTGCAAAAGAGCTTTTTTTTTTCTTCCATCCCTCTCTTTTTCTTCCCCA TCGTTCGTGTGCTGCCCCCAAGAAGCCGGGAGCTAGCTAGCTAGCGAGCGGCCCACCGGC CGAGTTTGGAGCTAGCACGAGCAGGCTGCTGTAGGCGTTGGCAGCACGCTCTCTTTCTTT CCCTCTCGGCGGCATGCCTTCGGCGGCATTAAATCTCGGCACGGCGGTCGAGGGCAGCTT CCAAGGCGCCGGCGGCGGCATGGTGCCGTCCGCGCGCCTCCTCACCGCTAACGGCGGCGG CGCGCCGAGCCGTCGGGAGGAGACGGCCAACGGCGGAGGGCCTGGCTCTGACCTGGCCGC GCTCCGGCCCACCAAAAGGCCGCGCGGGAAAGCCCAGCTGGCCGGGAAGCCCAGGAGGCG GGCGCCGATCTGGAACCTGCAGGCCGCCGTCTTCGTCTCTGTCGTCCTCAACGTCGGCCT CCTCCTCCAGCACCACGTCAACAGCACAGCTCCGTCGCACCACGACCACGACCACGGGCA CCGGCAGGAGCACCAGGCCTGCCCGACGCATCTAGACGGTGGCGGCGTCAGCCGCAGCAG TAGGGGGAGGCAGGAGGTGGAGGCGGCGGCGTCGGCGGCGTCCGTGCCCAAGGCCGCCGG GGCGCCGTCCACCGGCAAGCCGCCGGTGACGCCGGACTCGGTGATCAACCTCGACCACGG CGACCCGACCATGTTCGAGGAGTTCTGGCGGGGGACGGGGGCCGCCGCGGAGATCGTGAT CCCGGGGTGGCAGACCATGAGCTACTTCTCGGACGTGGGCAACGTGTGCTGGTTCCTGGA GCCCGGGCTGGACCACGAGGTGCGGCGGCTGCACCGCCTGGTCGGCAACGCCGCCGTGGA CGACGGCTACCACGTCCTCGTCGGCACCGGCTCCACGCAGCTCTTCATGGCCGCGCTCTA CGCGCTGTCGCCGCCCGCCGCCGCGCCCATGAGCGTCGTGTCCGCGGCGCCGTACTACTC GTCCTACCCGGCCGTGACGGACTTCCTCCAGTCGGGGCTGTTCCGGTGGGCCGGCGACGC CAGCTCGTTCACGGGCGACGCCTACATCGAGCTGGTGTGCTCGCCGAACAACCCCGACGG CGCCATCCGCGAGGCCGTCCTGCCCTCCGGCGGCTCCGGCGTAGCGGTCCACGACCTGGC CTACTACTGGCCGCAGTACACGGCCATCACCAGACGGGCCGACCACGACATCATGCTCTT CACCGTGTCCAAGAGCACGGGCCACGCCGGCACGCGGATCGGGTGGGCGCTGGTGAAGGA CCGCGACGTCGCCAAGAGGATGGCCAAGTTCATCGAGCTCAACACGATCGGGGTCTCCAA GGACTCGCAGCTGCGCGCCGCCAAGGTGCTCGGCGCGGTCTCCGACGCCTACGAGCTCCC GGAGGCGGCCCAGCACCGCCTGTTCGACTACGGGCGGCGCAAGATGGTGGAGCGCTGGCG CGTGCTGCGCGAGGCGGCCGCCGCCTCGGGCGCCTTCAGCCTGCCCCACGAGACCTCGGC CTTCTGCAACTTCACCAAGGAAACGGCTGCCACTAACCCCGCGTTCGCGTGGCTGCGCTG CGACAGGGAGGACGTGGAGGACTGCGCGAGCTTCCTGCGCGGCCACGGGATCCTGACGCG GAGCGGGAGCCAGTTCGGCGCGGACCCGAGGTACGTCCGGGTCAGCATGCTCGACCGGGA CGATGCCTACGACATCTTCGTCAAGCGCCTCTCCTCCCTGCACTGAACAGGCCGGGTCGG CTACACGCATGCATGGCATGGAGATGGGAGGAGGATCGATGCCATGCCGCCCGGCCGGCG TCGGCATTGCCGGTCCGTGGAACAGTGTGAGCATGCGCCATGATCGAGTAGTAGAGGGCA GCAGTGTTGGTACTTGGTAGGAACAAGGGCAGGAGGAGCAACGCTTTGTTTTGCTCTTTT CTCCTCTATATGCTGTGTGTTGTTCGGGATCCTTATAATGGTTTCATTTTTTT