Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008649_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:8:15902710:15910406:-1 gene:Zm00001d008649 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGCTAGAAATAATGAGGGTCATCTCCAGCTGCCAGAGATGGATCATATTCAACCCAAG AACACCCCGCACAATGAACCACTGCCTCTAGGCCAGAAGCTTATGCTGCATCATGGAAGT GATGCACCCCTTAGAATTGGTCATTCAAGTCATGAGAATATGAGACTTAGATCAAATGAT CTTCCACCTTTAAGTCACACTGTGCAAACTCAAGGTTATAGAGTTGGGAACCCAGGAGCC TCGCATGCTCCTTTTGTTCATTGTCATGCTGGAAGTTCCAGTAGTCATTTACCAGAACCT GCTGTGAATTATCCACATAGGTCGGAGGAAGGCTTTGCTCCAGTGGGTTCCCATATGGAC AACAGAAGGGCTGCAACGAAGCGAAAAGATCCTATTGTGCACCCTGCTGGGATCAGTGCT ACTGGTTATTATGTTGGAAGTTCTTCCAATACTCAGCTATCTAACTCTGTGCAGCCAAAT CCTGCTCCACTTTCTGAGCCCTTACTTCGTCAAATACCTTTAAGCATTGACCGAAGTGGT TGGGATGGCCTACACTTAATTCATCAAGAAGGATTTCAGAGGAATGTGAGAGCACGCCAG CGCCACAGCCATAATATTTCATTAGAGCCCAGAACAGCTTCAACCTACCCACTAAACAGT GTTCATGTGCCATCATTTGGTTCAACTACAAGTGCTTCCTTAAGTATGTCAGTGGAAAGG AACCAAGCATCTGTTTCTGTGCCAACAAGAAATGTACCATCAGGTGCACCAGGTATCACT AGCAGGTCCCTGACAAGGAGGGCTTACTATCCTGTGGTTGGAAGTAGCAACTCAAGCGTT GATGTCGTTCCAACTATCTGTGGATCATCTGGCGCAGCAATATTTGCTAATGGTGGCTAT GCTCTTAATGCTGATGCTGGAACTGTTTCTATCTACCCTAATCCAGCTCCTGCTACTTCA TCTGGCTCTATAACCATGCCCATGCCCATGCTCCATCAGATGGTCATTCAGAGCCATCCA CCTGCTACCTCTGCAGCAACCTCTACATCCATGTGGATCGCTCAACCATTACCTGCCAGA ACTGCTGCGGCTTCTAGACATGCAAGACGCGTATCAGCAGGGCTTGCCAACAATGGAAGG TACAGAAGGGCTAGGAGCTCTTACTACAGCCTTCATCCACTGATGATGGTAGAGGCAGAG CGGTTCATGATGGACCAGTTGGTCTTTTACGAATCAAGAGCAGCAGCCGCTGACCCCCAC AGGGACATGAGACTGGACATCGACAACATGAGCTACGAGGACCTGTTGGCTTTGGGAGAA TCTATGGGCAATGTCAACACAGGCTTGGCCGATGAGAAAATTTCGAAGTGCGTGAAAGAA GTGGTCTGCTGCAGTTCCGACCAGATGCAAACCGATCAAGATGACCAGGATGACGACGGA AGCTGCGTCATCTGCCTGGAGGGTTACAGAGACAAGGATATGCTGGGGATACTGAAATGC AGGCACGACTTCCACGCCGGCTGCATCAAGAAGTGGCTGCAGACGAAGAACTCGTGCCCG GTGTGCAAAGCCGCCGCCGCCTAG

Peptide Sequence

PEP ID	Zm00001d008649_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:8:15902710:15910406:-1 gene:Zm00001d008649 transcript:Zm00001d008649_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MARNNEGHLQLPEMDHIQPKNTPHNEPLPLGQKLMLHHGSDAPLRIGHSSHENMRLRSND LPPLSHTVQTQGYRVGNPGASHAPFVHCHAGSSSSHLPEPAVNYPHRSEEGFAPVGSHMD NRRAATKRKDPIVHPAGISATGYYVGSSSNTQLSNSVQPNPAPLSEPLLRQIPLSIDRSG WDGLHLIHQEGFQRNVRARQRHSHNISLEPRTASTYPLNSVHVPSFGSTTSASLSMSVER NQASVSVPTRNVPSGAPGITSRSLTRRAYYPVVGSSNSSVDVVPTICGSSGAAIFANGGY ALNADAGTVSIYPNPAPATSSGSITMPMPMLHQMVIQSHPPATSAATSTSMWIAQPLPAR TAAASRHARRVSAGLANNGRYRRARSSYYSLHPLMMVEAERFMMDQLVFYESRAAAADPH RDMRLDIDNMSYEDLLALGESMGNVNTGLADEKISKCVKEVVCCSSDQMQTDQDDQDDDG SCVICLEGYRDKDMLGILKCRHDFHAGCIKKWLQTKNSCPVCKAAAA

Transcript Sequence

Transcript ID	Zm00001d008649_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:15902710:15910406:-1 gene:Zm00001d008649 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	GATGGCGCTGCAGCTAGCCTTATTACTTGCCGGCCCGTCACTCACCCCTCTCTCTCCCGC CGGCCCCGTTCCTCTACTAGTCCTTCTCCTCTCTCTTTCACACACACACACGCGGCCAAA TTCCGCTCTCTGCTTTGTTTACGCAGGCGACGCAAGCCACGCAGCGCGCCGCCGCCGCCG CGTCTCCTCTCCGCCCCGCGAAGCTTCCGGGGGGCCCTCTTCCTTCCTCCGCCCCAGCCC TCGAGTCGGTCTCCACCGGCGGCAGCGGGCTTCCGCGCCGGCGCCGGACTGGGTCGGCCC GGCCACGAGATTATTAAGGGCAGGCAGACATTACTTGTTTTATGGCTAGAAATAATGAGG GTCATCTCCAGCTGCCAGAGATGGATCATATTCAACCCAAGAACACCCCGCACAATGAAC CACTGCCTCTAGGCCAGAAGCTTATGCTGCATCATGGAAGTGATGCACCCCTTAGAATTG GTCATTCAAGTCATGAGAATATGAGACTTAGATCAAATGATCTTCCACCTTTAAGTCACA CTGTGCAAACTCAAGGTTATAGAGTTGGGAACCCAGGAGCCTCGCATGCTCCTTTTGTTC ATTGTCATGCTGGAAGTTCCAGTAGTCATTTACCAGAACCTGCTGTGAATTATCCACATA GGTCGGAGGAAGGCTTTGCTCCAGTGGGTTCCCATATGGACAACAGAAGGGCTGCAACGA AGCGAAAAGATCCTATTGTGCACCCTGCTGGGATCAGTGCTACTGGTTATTATGTTGGAA GTTCTTCCAATACTCAGCTATCTAACTCTGTGCAGCCAAATCCTGCTCCACTTTCTGAGC CCTTACTTCGTCAAATACCTTTAAGCATTGACCGAAGTGGTTGGGATGGCCTACACTTAA TTCATCAAGAAGGATTTCAGAGGAATGTGAGAGCACGCCAGCGCCACAGCCATAATATTT CATTAGAGCCCAGAACAGCTTCAACCTACCCACTAAACAGTGTTCATGTGCCATCATTTG GTTCAACTACAAGTGCTTCCTTAAGTATGTCAGTGGAAAGGAACCAAGCATCTGTTTCTG TGCCAACAAGAAATGTACCATCAGGTGCACCAGGTATCACTAGCAGGTCCCTGACAAGGA GGGCTTACTATCCTGTGGTTGGAAGTAGCAACTCAAGCGTTGATGTCGTTCCAACTATCT GTGGATCATCTGGCGCAGCAATATTTGCTAATGGTGGCTATGCTCTTAATGCTGATGCTG GAACTGTTTCTATCTACCCTAATCCAGCTCCTGCTACTTCATCTGGCTCTATAACCATGC CCATGCCCATGCTCCATCAGATGGTCATTCAGAGCCATCCACCTGCTACCTCTGCAGCAA CCTCTACATCCATGTGGATCGCTCAACCATTACCTGCCAGAACTGCTGCGGCTTCTAGAC ATGCAAGACGCGTATCAGCAGGGCTTGCCAACAATGGAAGGTACAGAAGGGCTAGGAGCT CTTACTACAGCCTTCATCCACTGATGATGGTAGAGGCAGAGCGGTTCATGATGGACCAGT TGGTCTTTTACGAATCAAGAGCAGCAGCCGCTGACCCCCACAGGGACATGAGACTGGACA TCGACAACATGAGCTACGAGGACCTGTTGGCTTTGGGAGAATCTATGGGCAATGTCAACA CAGGCTTGGCCGATGAGAAAATTTCGAAGTGCGTGAAAGAAGTGGTCTGCTGCAGTTCCG ACCAGATGCAAACCGATCAAGATGACCAGGATGACGACGGAAGCTGCGTCATCTGCCTGG AGGGTTACAGAGACAAGGATATGCTGGGGATACTGAAATGCAGGCACGACTTCCACGCCG GCTGCATCAAGAAGTGGCTGCAGACGAAGAACTCGTGCCCGGTGTGCAAAGCCGCCGCCG CCTAGGACGACACCAGAGGAGCGAGCAACTATTTTGTGCTCCTCCTCGATCCATTCATTT TTTAGGCTCAGGTCGAATTATATATGCCGTTCCATTCTTTTGATTCCTGGCAGTCGTGTA AATAAATGCTCTGTGTTGGTTATTTTAGTTATCACTTGGGTTACATTAGCCCAAATTCTC CTGTTGCATTGTAAACAATCCAGTGGTGAAGGCAATTGATCAAGTGGTTGCAAG