Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008631_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:15272221:15287303:1 gene:Zm00001d008631 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGCCGCTGCTTGAGTTCGCGATCCTCGCCACTGCCTGCAGGTTCAGCAAGCCC CTTACCGTTCTCAGGAGGCTTGGCGTTCTTGGCCCACCAACCGTTCGACGCAATGCCGCA GAGGCGTTCGTGCCTTCACCGTTTCGCCAGGTTGTCGTTCAGAGTGGAAAGCTTCTTGGG ACACCAAGGTTCTGCCACACCACTGCCGGCATGTCAGAATGTCTCCCGGACGTCTACGCC AGTCAGGTACTGAAGGTTCTCAAGTCCACCAGTGCTGACAACACGGATCTCAGCGGTGCT CTTCATCAGTTCGCGGTCCACATGGATGAGGATATTATCCTCATGGTCCTCCAGAAGCAG CGGTCCAACTGGCAGGTCGCCCTGGCATTCTTCAACTGGGCGGCAACCCTGCCGGGGTAT GCCCACGGGTCAAGGGCCTACACCGAGATGCTGGACATTCTTGGGCGGATGAAGAAGGTC AGACACATGAGGCAGCTGTTTGACGAGATTCCTGAGGAGCGACGTCAGGTGGTCGTGACG AATAAGATGTTTGCCGTGCTGTTGAACCGGTACGCTGGTGCGCACAAGGTGCAGGAGGCG ATAGAGGTGTTCTACTTGAGGAAGGATTACGGGTTTGAGCTTGACTTGGTCGGGTTCCAG ATACTACTGATGTCGCTGTGCAGGTATAAGCATGTCGAGGAGGCGGAGGCGCTGTTCCGT GAGAAGAAAGATGAGTTCCCGCATGTCACAAAGAGCTGGAACATTATACTAAATGGTTGG TGTGTCAAGGGAAGCCTGAGGGACGCTCAAAGGATTTGGAATGATATCATTGCATCTAAG GTTGAACGAGACCTATTCACCTTTGGTACGTTCATAAACGCATTGGCCAAAAATGGCAGA ATTAGTGCCGCGGTGAAGCTGTTCAAACAGATGTGGGAGAAAGGGATCAATCCTGATGTT GCGATTTGCAATTGTATCATCGACCAGCTGTGCTTCAAGAAAAAGATTCCAGAAGCACTT GAGATTTTTGGTGAGATGAATGACCGGCTTTGTCAAGCCGATGTGGCTACCTACAACACT TTGATAAAATACATGTGTAAGATAAAAAGGATGGAGAAAGTTTATGAACTTTTGGATGAC ATGGAAGCAAAGGGCTGCCCTCCAAACAATAGGACATACTCCTACATTCTGAAGACGACT GAGAAACCCAAAGATGTCATTGCCTTGATGCAGAGGATGGAGCGAACCGGCTGCAAATTG GATTCTGATATATACAACTTGATATTGAACCTTTATATCAAATGGAAATATGAGAAGGGG ATGCAACAGATATGGGATGAGATGGAGAGAAGAGGGTCAGGCCCAGATCAGCGGTCGTTT ACTATTATGGTTCATGGTCTTCATTCCCAAGGCAAGCTCGATGAGGCTCTGCAGTATTAC ACAACAATGAAGTCTAGAGGGATGATTCCAGAACCTAGGACCAAGATACTGGTGAAAGCT ATGCACATGAAGAAGGACGGGGCTGCCACTGAAGATGACTCGGCAAGTATGGCAGGGAAG CATCTAAAATTGGATCATCGTTCAAGACTATTCAATGTTCATAGATAG

Peptide Sequence

PEP ID	Zm00001d008631_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:15272221:15287303:1 gene:Zm00001d008631 transcript:Zm00001d008631_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MPPPLLEFAILATACRFSKPLTVLRRLGVLGPPTVRRNAAEAFVPSPFRQVVVQSGKLLG TPRFCHTTAGMSECLPDVYASQVLKVLKSTSADNTDLSGALHQFAVHMDEDIILMVLQKQ RSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVT NKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFR EKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGR ISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNT LIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKPKDVIALMQRMERTGCKL DSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYY TTMKSRGMIPEPRTKILVKAMHMKKDGAATEDDSASMAGKHLKLDHRSRLFNVHR

Transcript Sequence

Transcript ID	Zm00001d008631_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:15272221:15287303:1 gene:Zm00001d008631 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	AGAGATCTCGGACGTTGGACCTGAGGCCCGAGCCGGGTAGCCGAGCAAAGCGAGAGCTCC CCTCTCCCTGTCTCCTCGTCTGTGACTGTGCGCCGCCATCGCCCGTCGACCAGCGCCGTC CGCCCGCTCGAAAACTGAGACGCACGCTGCCCGCGCATCGCCGTGGCCTGCTCCAGTCTG TGGAAAAGTGACGAACCAACTCGGGGAATTCTACTCTCGAGGCCGCCACCTCCGCCTCCG CCTCCAGCCCTCCACCGACTACTGTCTGGAACTGGAAGTGTACCACTACTATTCAATTGG CCCTAGCCCTCGCATAGCACGATGCCGCCGCCGCTGCTTGAGTTCGCGATCCTCGCCACT GCCTGCAGGTTCAGCAAGCCCCTTACCGTTCTCAGGAGGCTTGGCGTTCTTGGCCCACCA ACCGTTCGACGCAATGCCGCAGAGGCGTTCGTGCCTTCACCGTTTCGCCAGGTTGTCGTT CAGAGTGGAAAGCTTCTTGGGACACCAAGGTTCTGCCACACCACTGCCGGCATGTCAGAA TGTCTCCCGGACGTCTACGCCAGTCAGGTACTGAAGGTTCTCAAGTCCACCAGTGCTGAC AACACGGATCTCAGCGGTGCTCTTCATCAGTTCGCGGTCCACATGGATGAGGATATTATC CTCATGGTCCTCCAGAAGCAGCGGTCCAACTGGCAGGTCGCCCTGGCATTCTTCAACTGG GCGGCAACCCTGCCGGGGTATGCCCACGGGTCAAGGGCCTACACCGAGATGCTGGACATT CTTGGGCGGATGAAGAAGGTCAGACACATGAGGCAGCTGTTTGACGAGATTCCTGAGGAG CGACGTCAGGTGGTCGTGACGAATAAGATGTTTGCCGTGCTGTTGAACCGGTACGCTGGT GCGCACAAGGTGCAGGAGGCGATAGAGGTGTTCTACTTGAGGAAGGATTACGGGTTTGAG CTTGACTTGGTCGGGTTCCAGATACTACTGATGTCGCTGTGCAGGTATAAGCATGTCGAG GAGGCGGAGGCGCTGTTCCGTGAGAAGAAAGATGAGTTCCCGCATGTCACAAAGAGCTGG AACATTATACTAAATGGTTGGTGTGTCAAGGGAAGCCTGAGGGACGCTCAAAGGATTTGG AATGATATCATTGCATCTAAGGTTGAACGAGACCTATTCACCTTTGGTACGTTCATAAAC GCATTGGCCAAAAATGGCAGAATTAGTGCCGCGGTGAAGCTGTTCAAACAGATGTGGGAG AAAGGGATCAATCCTGATGTTGCGATTTGCAATTGTATCATCGACCAGCTGTGCTTCAAG AAAAAGATTCCAGAAGCACTTGAGATTTTTGGTGAGATGAATGACCGGCTTTGTCAAGCC GATGTGGCTACCTACAACACTTTGATAAAATACATGTGTAAGATAAAAAGGATGGAGAAA GTTTATGAACTTTTGGATGACATGGAAGCAAAGGGCTGCCCTCCAAACAATAGGACATAC TCCTACATTCTGAAGACGACTGAGAAACCCAAAGATGTCATTGCCTTGATGCAGAGGATG GAGCGAACCGGCTGCAAATTGGATTCTGATATATACAACTTGATATTGAACCTTTATATC AAATGGAAATATGAGAAGGGGATGCAACAGATATGGGATGAGATGGAGAGAAGAGGGTCA GGCCCAGATCAGCGGTCGTTTACTATTATGGTTCATGGTCTTCATTCCCAAGGCAAGCTC GATGAGGCTCTGCAGTATTACACAACAATGAAGTCTAGAGGGATGATTCCAGAACCTAGG ACCAAGATACTGGTGAAAGCTATGCACATGAAGAAGGACGGGGCTGCCACTGAAGATGAC TCGGCAAGTATGGCAGGGAAGCATCTAAAATTGGATCATCGTTCAAGACTATTCAATGTT CATAGATAGTCTGCTTCCAGGTCTTTGTTCTATAATCTGAGCAGGGGATGCTGTCCATAT AGGTTTATGGGTTGAAAGAAAGAAAAACAGTTCTTTTTTCTATGGGTGTCTAAATCACAA TGGCTGCACCTTGGGCTAAAAAGAATCATCAGCATAGATTCATTGGCAATATGATTTCTC AGTAACTTTTGCTCAGACTTTCAGTGCCAGGATCATCAGTCAGCTGTGAAAACGTTTTCC TAGCAGGTGAAATTGGGAGTTCAAGGTGCGTACCGATATCCAAATTTATTTAATGTGTTG CGCAAGAAACAAACAAATGTGGTGGGAGCACTTAAATTCTACACCTTTTAATGTGGAATG GCAAAGTTTTATTTATTAGATTAAACAAGGATATGGATATTTTTATCTAGAACCTAAATA AAAACGGCTTGTTCTCTATGAGGTCCATGTGTTACTGTTTTTGCTACTTCAAACACTCGT TTGCCAGTGCGCTGAAATGTGATTCTGTAGGGCTACAAAATTGGAACACTATGTTCGTAC ACACATTTCCACTTTTGGGTACTCTAGTATTCACTCTCAGTACATATAGATTAGAGTACC AAAACAAAGCCGTATACACGGTCTCAGGCTTCTTACACAGTTACCTAGATGCAGTAGGTT TAGGCATCATTTGCGGTGTGGAAGTTTAAGAATGCGGAAGAAGCCGTGATTTATCGACTC CGGCATGGACATTGTTGTTTTGCTATTCCGGTGCTTCAAATGTAAACATATGCAGACTGT TAAAGGAGTGACAATGATTTTGAGTCACTCATCTAACTTAATGAACAATCTCCACAGAAA GGAGTGATGTATTATGTTTTTCACTTAGATTCCTTCATAATAATTTGCGTAGCAACTAAC TGAACTACTAAGCACAAGATTTATTAACTAACAGTAAGATGATTCAGCTGAAGCGTATTT TAAGCAAGAGATGTTTCTGCTACTCGAGTTCTGTGACAAGAGATCTGGCAAACTTGCAGT AGGAATCTCTGATATCATGCATTTGGATGGCTGCGACCTGTATCGGCGTCCTCTCTCTTG GCTGCTTCTTTGAGCAAGAAACTCCGAGAGCGACGACAGAAACCAAGCAGTTCTCAGTTT CAGCTGTGGCGACATGGTTGGTGTTTGTGTGCAACCACATTTTTGCATCGGCTATCTCCC AGATTCTCTCTGGGAGAGCATCCTCTGAAAACCTGTGCAAGTCCAATGATCCTCTGAACA TCTCATCAGTTGGGCTCCTTCCCGTGAACATCTCAAGCAACAGTATGCCCACGCTATAAA CATCTCCAAGAGTCGAAACACAAGACCCTTCACCGTACTCTGTTATATATATTACGGAAA AAAGAATCGATCAAAAACCAACCAGTTTTATACAAGAAACAAGGAACAATGAATAGAAAC CCAAACACACGTATAGTTTCAGTCACCTGGAGCAACGTAGCCGATGGAGCCTCTTATTCC AGCTGTGCTGCTTGAATTCTGCAGGGTGTTACTTCTTGCAATCTCTGGAAGGATCCTTGA TATGCCAAAGTCTCCGACCCGGGCACTCATGTCCTGTGCGAGAAGGATGTTGCTTGGCTT GAGATCGCAGTGAACGATTGGTGGCTGACAGTGGTTGTGAAGGTAATCCAGACCGTCCAT GACATCTACAGCAACGTTGAGCCTCTGTACGATGCTAAGAGTGTTACTCACTGTGGGCAT GCTGCTAGTGCTAGGTTTTGGATGAAGCCAGTCACCTAGGCTACCATTTGGCATGAACTC AAAAACCAGAGCCTTGAACTCCCGGCCCTGGCGGTCGATGCTCGAGCAACACGTGATGAT CTTCATGAGGCAACGGTGACGCACCCTTCGCAGCGCCTCGCACTCGGCCACAAAGCTTCT ACTAGATCCAGATTGCTCGAGGTCGAAAACCTTGACCGCGGCAAGAGTAGTCCCCTCCTC GTCTTGAAAGGAGCATCTATAGACTGTCCCAAAGCTTCCTCTACCGAGCAAGTTGGTCTC TGAAAACCCGCCGGTTCCGTTTTCTAATGCATGGTAAGAAACCTTTTCGTACTGTTCCTC GATCATTGGTGGCCGGAACGAGCTCTGCTTGACCCTTTGTCGTCTGCGCTTCCAGTAGAT CAACCCAAAGACAAGTGCCATAAAGGCCAGAAACAGGAACGCTGATGTTGTTGCTAGAGC TATCGTAAGAGACTTGACCCGCCTCTTCTTGCTTCCTTTCTTCAGAGAGTTCTTGCGGCA TGGCTGTAAACGAAGCTGAGGTATGCCGCCACAAAGCCCACTGTTCCCGGCGACTGAAAA GTTTCGGGAAATCCTGAATATTCCTCCCTCTGGCACTTGGCCTTGTAGACTGTTGAAGGA CAGATCTAACTCTGACAGTGATGTCAAGTTCTGCAACGACGTTGGGATCGGCCCTGACAA GTTGTTGTGTGCTAGATCCAGTTGCTGAAGGTTGCGAATGGCACCGATGCCTTCTGGAAT AGTGCCGGATAGCTTGTTCATGGACAGGTTGAGTGCGAGTAGATCCGTCATATTCTTGAG AGACTGGGGTATCTCCCCCTCCAATGAGTTATCCTCCAACCAAAGCCCCTGCAGCATGAT GCACTCCCCGATGCTGTCAGGTAGCTCGCCGGATAGCTGGTTTCCAGATAGATCCATGCT GTTAAGGTTCACCAAGCTACCGACTTGAGGAGGAAGAGGGCCTGACAGCGAGTTAGACGA CAAGTCCAAGTACTTGGAGAGGAGTGGCAGTTCGAAAACCTCTGCGGGGATCGAACTGTT GAGACGGTTATTAGCTAGATCAAGGGATATTAGGTTCTTCAGCTGTCCGAAGCTCGTTGG AATTGCGCCCTCCAGGTTGGCATGCTGCGCGTACAGCTCAATCAACCTCGAGAGGTTTCC GATGGATGTCGGTATGAGGCCTGACACCTGAGTGTTGTACAGACCTAACCGAGCCAAGTT TCCTAGCTTGCCCATGCTGTCCGGAAGCACGCCGGAGACGGACGTGAACCCCAGACCGAG GAGTTCAAGGCTGGCCAGGTTGCCGATGGCTGAGGGGATGCTTCCGGATATCCCGTCGTT GTATTCTAAACGGAGGATCTGCAGGGCCGTCGTCGAGAGGTTGCCTACCGAACCTGGCAG CCGCCCTGTGAAGCTGTTGTCGGCGATGTTTAGATCCTGGAGCTGGGTACAGTTTGACAG GGAAGCCATGAATTCCCACCCGTTTCTGTCGTCTGCTTCCAGCTCGTTTTGGAACAAGTA CAGGAGCTGCAGACCTCTGAGTCTCCCCAGCGCCGGAGGCACGCGCCCGTGGAGCATGTT TACAGAGAGCTCGACCCGCTGGAGCGTCGTGAGGTTAGTGAGCGAAGCGGGGATGGATCC CGTGAACTGGTTCCAAGAGAGGCTAAGGATCGACATGCTGGGAAATCTGCTGCCGATCTC GGCGGGGATGGTACCATTGAGCTTGTTCGCTTGGATCTGCAGTCTTTCCAGCGACGACAG GTTGTACAGAGAGCGTGGGGGCTCGCCGGAGAGGTAGTTGAAGGCGAGGTCAAGTCTCGT GAGGCCTACGATGCTGCCGAGGCTACGAGGGATGGCGCCCTGTAGCTGGTTGAATGCGAG GGACATGACACGAAGCGACGACAGGTTGCCTATGGACTCCGGTACGGTGCCAGTGAGGTT GTTTCGAAACAGTATGAGCTCCTCGAGGCGTGCGAGCTTGTTGCCGAGCTCAGAGGGCAG GCCTCCGCGGAGGTGGTTGGACTGGAGGCGCAAGTCCACCAGGCTGGTGCATGAGCTTAG GTTGGCGGCGGAGAGCTTACCGGAGAAGGCGTTGTAGCTTAGGTCAAGCGCACGGAGGTG GCGCAGGCGGCCGAGGCTCGCGGGGATGGCGCCGCTGAGGGCGTTGGAGCTCAGGTTGAG AAGCCTCAGGGACGAAAGGTTACCAACCGCCGGGGAGAGGACGCCGGTGAGCCCGCGAGA GGGTAGGAACAGCGCCACCACTCGACGCCGCCTGCCGCTGCCTCGGCACCTCACCCCTTC CCAGCTGCAGTACCCGCCGCCGCCGCCTGCGCTACCGTTCCACGAGGCAAGTACGTCTCC ATAGCCGCCAGGCCCGCCATGGACCGCCGCGACCTTGATGGCGTCAAGTGCGGCCTCGTC GTTGGCCTGTGTGGCCGCCGCGAGAGTCCAAAGCAGGCACATGGAGGCGGACAGCACCAG CAGGTTCACTGGGTCTCGGTGCTTTACCATGTCAGCCGGCGTCGAGTATTGACTGAGACT GACTGGGTGATTGACTGGGTGTGCGGAGACGGAGAGGGTCCGCTGCGCTCCAAGATGGTA TGCGAGCTGCTCTAAATATATAGGTGTGCGCCTGCATTGTCAAAGTGGTGGGGACCTACA TGCATTTACCAGGATCGAACGTCGAATCCATTTAGATTTTAAAGAAATGAAATTCATTAG CCCACTCGGCTCCGATTGTCTTCGTTAAAAAAAAACTAGCCAATTCAATAACAAATTGAC TAGTCATCTACGGCAGCCAGGAGCGGAGCCAGGATTATAGTATAAAAGGGGTCGAACAAT TCATCAAATATTATAAGATAAAAAAATATTATAGAATATATAAACATGTGCATACTAATT TACGTATAGCATAGATAATAAATTAATAAAAAAAGACTTACACCATATAATTGTATATTA ATTAACTCCAACAAAGGTCAATTAATTTGCTTTTACGATGATCATTCAAATTAAAAGCTT TGATTATATCACGAGAGTTGATTATAGCTATCAATTCCATATGAATATAGATTATGAAGT AACTTCACACAAAATAATCTTCCATTTATTTCGTAGATGTGTCTTCATAAGTTTTGTAGC TAAAAGGCTCTCTTCGTGATTGCAGTTGAGACCAGAAGAGTGTCCATTAACCTTAATAAT CCATAAACTATTTTATATATGAAATTTTTACACAATTTGACAAGACTTTTTATCAAATCG ACAAGTGATCATAATGTATTTGGTTTTAGATGGTTATATATTCAAGGTGAAGCACAAAAT TTGACGTGCACATCAACTATCCACTGACAACTTTGGGCTGAAATTTGCGACAAATTTTAT GCTTAAAATATGTGATTTTTTTTACTTGGATACAAATTTATTTTAACAAAAAAATCTATA TTTCATATTGTGTCATTATAAATATATAGTAAATTTTATTGCTCGCCCCCTTGTCTCCGG ATCCATAAACATGTTATGTTATGCCAAGGATAACCCATATAAGGCTAAAAATCTTACTAG CCGTAGAGTATTACATGTAGCATAGTTTCAAAGAAAACATATATAACGATATCGTTTTAA AAGCTCAAACAATATGTAAAAATTGATGCTAGAAAAAGTACCAAATAAAGAGTCTTAGAC GATAAAAAAAATATATCTTAATCATCTTACACCATTTGTGCCGACATCTTTGGTATAAAA AACATGCGGTCCTTTTTGTTGATCCACATCTTTTAATTAGTTTTGGCATTACTCTTTGAC GTGTCTTTCTTATCATATATTTTCTATTCTAGCGATGTACCTTATGTAACCTAAGATATA GAATGTTGTATTGCAAAGCAAGTTCAATGGATAATGAAAACCATCAAATTCAATCCTTCT TGTCGTTGTGAACGTCACTGTTGGGGGCCTTCGGCTTCCGAAGGACCTCAAAAACATGAT TTAACAATGTTTCTGGAGTAAAGTACATTAACAGGTATCTTCGGACTCGGATCAGAGCCA CGGTATGAAGAAGCACAAAGAACACGAAGGTTGGCGCAAAGCCGAAGCTGCGTGTAGAAG AGCTTCGGGACAGCGGCGGAAAAGGAAACCGACTTAAAGATGAAAAACCATATTAGACCT CGAAGAATTATCATAGAGTTATTGATAAATGTAAAGGGTATTAATGTAATTTTGCATGGG CTGTGACCCGTGTCTATAAATAGGTGAATAGTATCCCCGTACTGTTCACGCTGAC