Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008623_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:15007294:15014756:1 gene:Zm00001d008623 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
Sequence	ATGTCGGCCGCCGGCTCGGCGGCTCTACCTCTCCGTCTACAACTGGGTCGTCTTCTCCGT CTACAACAGCCGCCATCATGGAGTACTGATCTTTCTGTGTTTTTTTTTTCTGGTGGTGGC GGTGTTGGTGCTTCAGATTCTTCATGGGCTTGTAGGGTTGGTGAGGTCTCCAGTCTCTGC AACTCTTCCACAAATTGGATCCAGATTATTCCTCACGTGAGGTGTCTTGTGGAGTTTTCC CGAGGTCTAAAAGCATTTGCTAGAACTAGAGAACATGCAGTAGATGGCTATGTGACTTTC AGGACGTTAAGATTAGTCAATTATTCAATTTTTAAGTCCGATAATGGAACCCAGTCACAT CTTCTTGCTACTGCCCTGATCATAAGCTGGTCTGTCACTGAGATCATCAGGTACTCTTTC TTTGCAATGAAGGAGGCATTTGGATCTGCACCTTCCTGGTTATCATGGCTTTGCTCTCCG AGCCATAAGATGCGCAACACATGGAACTTGTCATACGACTACTTGTACCCATCTGTTCTT GCCCTCCTGGTTTATGTTCCAGGTAAGCCTTTCCCTTCTCTCGGCTGCTGCTGTACCGCT TTACTTAGATCTAGCAAACAATGTATGATTATCCTGTGTCCAGGAACATTTTTTATTATG GCAGTTCATCATGCCGTCAAAGCCACCACCTTAAAGCCATGGGCAGCAGCATCTCAGGGT CTTCGTCTTCCTCCCTGCAGCGCTTCAATGGCGGCGGGTGACGACGGGTCGGCGGTTCGG CGGCTCTACCTCTCCGTGTACAACTGGGTTAGCTTCTTCGGATGGTTGCAGGTGCTGTAC CACGTGACCTTGGCGCTGTTGGGTAGCGGCCATCAGGCCGTCTACGCTGCTGTCAAACTG CCACTCCTGTTCTCACAAACTGCTGCCCTAGCAGAGATTCTTCATTCTATTACAGGGCTC GTGAGATCTCCAATCAGCGCAACTCTTCCACAAGTTGGTGCGAGGATATTTGTTACCTGG TGCATCGTCTGGAGTTTTCCTGAGACACAGTCCCATGTCCTCGTTACTTCCTTGGTCCTA AGCTGGTCTATCACTGAGGTCATCAGATACCCTTTCTTTGGCTTGAGGGAGGCATTTGGG ATCACACCTTCCTGGCTCCTATGGCTCAGGTACAGCACGTTCACTGTACTCTACCCTGTT GGGCTGATCAGTGAGCTCGGCTTAATCTTCACTGCCATGCCTCACATGAAGGGAAGGTCC TTCTACATCTGCGCTGCACTGACCACTATCTACATTCCAGGATCAGGATCTGACATGACA TGGCGCGCTCTGCTGCATGCTGCTTCTTTTTGGCTCTCAGCGTTCCCGCACATGTACGGT CACATGCTCGCCCAGAGGAAGAAGAACCTGTCCAAGGCGAAAGCCGCATGA

Peptide Sequence

PEP ID	Zm00001d008623_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:15007294:15014756:1 gene:Zm00001d008623 transcript:Zm00001d008623_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
Sequence	MSAAGSAALPLRLQLGRLLRLQQPPSWSTDLSVFFFSGGGGVGASDSSWACRVGEVSSLC NSSTNWIQIIPHVRCLVEFSRGLKAFARTREHAVDGYVTFRTLRLVNYSIFKSDNGTQSH LLATALIISWSVTEIIRYSFFAMKEAFGSAPSWLSWLCSPSHKMRNTWNLSYDYLYPSVL ALLVYVPGKPFPSLGCCCTALLRSSKQCMIILCPGTFFIMAVHHAVKATTLKPWAAASQG LRLPPCSASMAAGDDGSAVRRLYLSVYNWVSFFGWLQVLYHVTLALLGSGHQAVYAAVKL PLLFSQTAALAEILHSITGLVRSPISATLPQVGARIFVTWCIVWSFPETQSHVLVTSLVL SWSITEVIRYPFFGLREAFGITPSWLLWLRYSTFTVLYPVGLISELGLIFTAMPHMKGRS FYICAALTTIYIPGSGSDMTWRALLHAASFWLSAFPHMYGHMLAQRKKNLSKAKAA

Transcript Sequence

Transcript ID	Zm00001d008623_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:15007294:15014756:1 gene:Zm00001d008623 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
Sequence	CTGGAGGCTGCTGCAACAGTGGCAATAACTCCCGCTGCCCACCGGCTCACCTGTCCTTCA TCCGCCCCGATCCGAACCCATTCAATTCCAAATTCACAACCCTGCCAGTGGTTGGCCCGC CGCTGCCAAATCGAATCGGACTCCGATCCGTGCAGCCCACCGGCGAGACGGCGAGACGCC GAAGCTAGCACACTTCATGCCATCTGTCTGACGTGATGCGTGTGGCCTCTCTGCTTTTAC TGGATCCCTAGCCAGCTCAGGAGAAACTCAGAATAGTACTATAGCCAAGTCCATCCAGTC CTTTCGCGGCGTCTTCCTTGCTCACCGCGGCTCCGGCGATGTCGGCCGCCGGCTCGGCGG CTCTACCTCTCCGTCTACAACTGGGTCGTCTTCTCCGTCTACAACAGCCGCCATCATGGA GTACTGATCTTTCTGTGTTTTTTTTTTCTGGTGGTGGCGGTGTTGGTGCTTCAGATTCTT CATGGGCTTGTAGGGTTGGTGAGGTCTCCAGTCTCTGCAACTCTTCCACAAATTGGATCC AGATTATTCCTCACGTGAGGTGTCTTGTGGAGTTTTCCCGAGGTCTAAAAGCATTTGCTA GAACTAGAGAACATGCAGTAGATGGCTATGTGACTTTCAGGACGTTAAGATTAGTCAATT ATTCAATTTTTAAGTCCGATAATGGAACCCAGTCACATCTTCTTGCTACTGCCCTGATCA TAAGCTGGTCTGTCACTGAGATCATCAGGTACTCTTTCTTTGCAATGAAGGAGGCATTTG GATCTGCACCTTCCTGGTTATCATGGCTTTGCTCTCCGAGCCATAAGATGCGCAACACAT GGAACTTGTCATACGACTACTTGTACCCATCTGTTCTTGCCCTCCTGGTTTATGTTCCAG GTAAGCCTTTCCCTTCTCTCGGCTGCTGCTGTACCGCTTTACTTAGATCTAGCAAACAAT GTATGATTATCCTGTGTCCAGGAACATTTTTTATTATGGCAGTTCATCATGCCGTCAAAG CCACCACCTTAAAGCCATGGGCAGCAGCATCTCAGGGTCTTCGTCTTCCTCCCTGCAGCG CTTCAATGGCGGCGGGTGACGACGGGTCGGCGGTTCGGCGGCTCTACCTCTCCGTGTACA ACTGGGTTAGCTTCTTCGGATGGTTGCAGGTGCTGTACCACGTGACCTTGGCGCTGTTGG GTAGCGGCCATCAGGCCGTCTACGCTGCTGTCAAACTGCCACTCCTGTTCTCACAAACTG CTGCCCTAGCAGAGATTCTTCATTCTATTACAGGGCTCGTGAGATCTCCAATCAGCGCAA CTCTTCCACAAGTTGGTGCGAGGATATTTGTTACCTGGTGCATCGTCTGGAGTTTTCCTG AGACACAGTCCCATGTCCTCGTTACTTCCTTGGTCCTAAGCTGGTCTATCACTGAGGTCA TCAGATACCCTTTCTTTGGCTTGAGGGAGGCATTTGGGATCACACCTTCCTGGCTCCTAT GGCTCAGGTACAGCACGTTCACTGTACTCTACCCTGTTGGGCTGATCAGTGAGCTCGGCT TAATCTTCACTGCCATGCCTCACATGAAGGGAAGGTCCTTCTACATCTGCGCTGCACTGA CCACTATCTACATTCCAGGATCAGGATCTGACATGACATGGCGCGCTCTGCTGCATGCTG CTTCTTTTTGGCTCTCAGCGTTCCCGCACATGTACGGTCACATGCTCGCCCAGAGGAAGA AGAACCTGTCCAAGGCGAAAGCCGCATGACGCTCCAGACGAGCCTAGGCCTCACTGTCCC AGACGGAGAGTAACCACTGTCTCTAACCACGGGATGTCAGAGTGCACTACTCTTATCAGG TGGCAATAACACCGGGGTTGTACCAAGGAATATACTGGATAGCTCTTCCATGGGCAAATC AATAATAAATAAAATCACCATTTATATAA