Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008592_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:13776013:13777908:1 gene:Zm00001d008592 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative lipid phosphate phosphatase 3 chloroplastic
Sequence

ATGATCTCTATACTCTGTCCCTGGCTCGTCTTCATATCCATATATGTTGCCAGGAGAGAC
GTTTATGATCTGCATCACGCTGCACTAGGTGTTCTTTTCGCTGTGCTGATAACTGCAGTT
TTTACCGATGTGATAAAGACTGCAGTAGGGAGACCGAGGCCAGACTTCTTCTGGCGATGC
TTTCCTGATGGAAAGCAGTTATACGATCAGGTGATTGGCGATGTGATTTGCCATGGTGAT
AAAAACTTCTTAAAAGATGGGCGCAAGAGCTTTCCTAGTGGCCACACTTCGTGGTCTTTT
GCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTAAGGCCTTCAATCGCCAA
GGTCACGTGGCCAAACTTTGCATAGTGATCCTTCCGCTTCTTCTTGCTTCACTCGTTGGG
GTTTCAAGAGTAGATGATTATCGACACCACTGGGAGGATGTGTTTGTTGGCGGTCTTATT
GGATTTATCATGGCAGTGCTATGTTACCTGCATTTCTTTCCTCCTCCATACCATGATCAA
GGTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCAAGCGGCAAATTCAAAC
AACGCACAAAACCAACAGTCCACAGGTGATCATCGCATTGGCATGTCCGAGCAGCAGCAT
AACAGGACATCAAGAAACGATTTGGAATCTGGAACCGTGTAA

Peptide Sequence

PEP ID

Zm00001d008592_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:13776013:13777908:1 gene:Zm00001d008592 transcript:Zm00001d008592_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative lipid phosphate phosphatase 3 chloroplastic
Sequence

MISILCPWLVFISIYVARRDVYDLHHAALGVLFAVLITAVFTDVIKTAVGRPRPDFFWRC
FPDGKQLYDQVIGDVICHGDKNFLKDGRKSFPSGHTSWSFAGLGFLSLYLSGKIKAFNRQ
GHVAKLCIVILPLLLASLVGVSRVDDYRHHWEDVFVGGLIGFIMAVLCYLHFFPPPYHDQ
GCRPYAYFHMLEELQAANSNNAQNQQSTGDHRIGMSEQQHNRTSRNDLESGTV

Transcript Sequence

Transcript ID

Zm00001d008592_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:13776013:13777908:1 gene:Zm00001d008592 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative lipid phosphate phosphatase 3 chloroplastic
Sequence

CTCCAATTCTGTTGTCTGATGCAAGCTCGAACTCACTCTATTCAGCACTGATGTGGGGCG
TTCGACCTTTTGCTAGATGATCTCTATACTCTGTCCCTGGCTCGTCTTCATATCCATATA
TGTTGCCAGGAGAGACGTTTATGATCTGCATCACGCTGCACTAGGTGTTCTTTTCGCTGT
GCTGATAACTGCAGTTTTTACCGATGTGATAAAGACTGCAGTAGGGAGACCGAGGCCAGA
CTTCTTCTGGCGATGCTTTCCTGATGGAAAGCAGTTATACGATCAGGTGATTGGCGATGT
GATTTGCCATGGTGATAAAAACTTCTTAAAAGATGGGCGCAAGAGCTTTCCTAGTGGCCA
CACTTCGTGGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTAA
GGCCTTCAATCGCCAAGGTCACGTGGCCAAACTTTGCATAGTGATCCTTCCGCTTCTTCT
TGCTTCACTCGTTGGGGTTTCAAGAGTAGATGATTATCGACACCACTGGGAGGATGTGTT
TGTTGGCGGTCTTATTGGATTTATCATGGCAGTGCTATGTTACCTGCATTTCTTTCCTCC
TCCATACCATGATCAAGGTTGTAGACCGTATGCATACTTCCATATGCTGGAAGAACTTCA
AGCGGCAAATTCAAACAACGCACAAAACCAACAGTCCACAGGTGATCATCGCATTGGCAT
GTCCGAGCAGCAGCATAACAGGACATCAAGAAACGATTTGGAATCTGGAACCGTGTAACA
TGCCTCCTGCACTTTTACTGAAGTAGCAGCAGCGATGTACATTGGACAGTAAGTGCAACC
TAACCTAGTATGCGTGTACTCGACATGTGTTACAATCTATATAATTAGAGGTATATAGTT
TCTCCTTACCCAGTGTTAGCCTGCTTCATCTTGTGTGAAATCAGAAGGCAGTAAGGCCTA
ACCCTAGATGTTCTAGGTCTACCTGTGGCCAAATTAGTTGTAAGAGTTGCTAGTGGAGGC
ACTGATAAGGAACTTATTCCAGTAATAGAAAAACCAGCAGAAAGTAGAGTAGAAAGAAAA
TGACAGGCACATCTCCTAAACATCGTGGTGCATGTTGCACCGTCCAATGGGTTCCAAGAC
TCGTTCTGTTCGTATATCGAAGGGAAAAATACACATCTGTTTTGTCTC