Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008564_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:13133398:13137232:1 gene:Zm00001d008564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Surfeit locus protein 5

Sequence

ATGAGCAAAGCAGGCGGCGGCCCCGGCTCGGCCCCGGGCCCGACGGCCGCGGCCGCGGCG
GCCGCGGTGCAGAAGCAGAAGTCGCTGCTGCAGAAGGCGGACGCCGACGTCTCCAGCCTC
GTCGACAATTTCTCCTCCCTCATCAACATCGCCCGAGTCAACGATCCGCCAGTGCGCAAC
TCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGGTACATTCAGCAGACTCT
CTGTTGAAATTAGTGTCGGAACTTAAGAGGACAGCCATCTTTTCTGGGCTTGCTTCATTG
AATGAGAATGTGGATAGGAGGATCGAAGTGCTGGGTCAGCAAGCTGAGGGAACTGAGAGA
ATGCTGGAGAGGATTGGGCAGGAGGCAGCAGCAAGCCTCAAGGAGCTAGAGGCACACTAC
TACTCATCTGTTGTGCGGTCACCATCCTATGATTGA

Peptide Sequence

PEP ID

Zm00001d008564_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:13133398:13137232:1 gene:Zm00001d008564 transcript:Zm00001d008564_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Surfeit locus protein 5

Sequence

MSKAGGGPGSAPGPTAAAAAAAVQKQKSLLQKADADVSSLVDNFSSLINIARVNDPPVRN
SQEAFQMEMRAARMVHSADSLLKLVSELKRTAIFSGLASLNENVDRRIEVLGQQAEGTER
MLERIGQEAAASLKELEAHYYSSVVRSPSYD

Transcript Sequence

Transcript ID

Zm00001d008564_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:13133398:13137232:1 gene:Zm00001d008564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Surfeit locus protein 5

Sequence

AATGCCATGCTGGTTGGCGACTCTTTGGCGCAGCGGCAGCCAGGTCGAAGCGGCACCCAC
CCGCAATGAGCAAAGCAGGCGGCGGCCCCGGCTCGGCCCCGGGCCCGACGGCCGCGGCCG
CGGCGGCCGCGGTGCAGAAGCAGAAGTCGCTGCTGCAGAAGGCGGACGCCGACGTCTCCA
GCCTCGTCGACAATTTCTCCTCCCTCATCAACATCGCCCGAGTCAACGATCCGCCAGTGC
GCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGGTACATTCAGCAG
ACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACAGCCATCTTTTCTGGGCTTGCTT
CATTGAATGAGAATGTGGATAGGAGGATCGAAGTGCTGGGTCAGCAAGCTGAGGGAACTG
AGAGAATGCTGGAGAGGATTGGGCAGGAGGCAGCAGCAAGCCTCAAGGAGCTAGAGGCAC
ACTACTACTCATCTGTTGTGCGGTCACCATCCTATGATTGAGGGTTATCCCAGGTTATCT
GTTAGGCGGTTTGCTCTTCAGGGTTATCTCAGGGTTTTTTATTTCACCTTGAATATTGCC
TACTGACATTACCATTACCTTTTTGTTGGGACTAAAGTTTAGTAGATTCGTCTTATTGTT
TAGTCCTTATCTGTATAATTAGTTTATAATTAGATTATATGTAATACTTCTAAATATCAT
TCAAATATTTGATGTTCTAAATATCATTCAAATATTTGATGTGAAGGAATCTTCGGAAAT
ATGGATTAGGCACACCGTCCTGCCATCTGGCAATTCATTAGGGTGCCAATTGATGTAGCT
GTTTGGTTCACATATTGTAACGTTGTAACGTGATGGGTATATTGTAACGTTGTAACGTGA
TGGGTGACAAATAACATTAAACCATATTTATTTAAGTTTAACCGTAATCAGATACTACAT
TAGAGAATGATATCAGCCTAT