Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008532_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:11973173:11975079:1 gene:Zm00001d008532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein JAGGED
Sequence

ATGAGGCAAGACGGGAGCCCATTGGACCTCAACAACTTGCCGGAGGAGTACGGCAAGCAA
GCGGCAGAGAGCTCCACGACCACCGCCACATCAAGCGTTCATGCAGTTATTAGGCCAAAG
AAGACGAAGAGCGGTAGAGGGAAGGATGCTGCTGCGAAGGTGTATGAGTGCCGGTTTTGC
TCCCTCAAGTTCGGCAAGTCTCAAGCGCTTGAGAGGGAGACTGAAACCCTTAACCGTGCC
CGGCAACTCGTCTTCGGCAACGAGAGCCTCGCCGTCGCCGCCGTCGGCGCGCAGATGAGT
TTCAGGGATGTAAATATGGCAGGTGCTGCCCCACCGACCGTACTCGGAGTCGGAGGGAAC
TTCCGGGGAGGCGCCGCCGGTGGCGGCAGCATCGGCGACCTGTGCGTCCCGTTCCGGCCG
GTGCTGTCGCCGCAGCCTTCGTACCATTACCTCTACACGGCGCCATCAACATTGCACCCG
ATGAGCTACCCGGCGACGTACCCTGGCCCACTGCGCCAGCCTGCTGTCGACGACTACATC
ATCGGCCACGCAGTCTCCGCCGGCGGGGACACACTAATGCAATCGACACACCGCGGCAGC
TTCTCCTGCTTCGGAGCTCCACTCACCGCTCCGCCGGTGGCGGCAACGAACGTGCAGGCC
GACAAAGTTATCTGCAACTGCAGCTTCACTTGA

Peptide Sequence

PEP ID

Zm00001d008532_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:11973173:11975079:1 gene:Zm00001d008532 transcript:Zm00001d008532_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein JAGGED
Sequence

MRQDGSPLDLNNLPEEYGKQAAESSTTTATSSVHAVIRPKKTKSGRGKDAAAKVYECRFC
SLKFGKSQALERETETLNRARQLVFGNESLAVAAVGAQMSFRDVNMAGAAPPTVLGVGGN
FRGGAAGGGSIGDLCVPFRPVLSPQPSYHYLYTAPSTLHPMSYPATYPGPLRQPAVDDYI
IGHAVSAGGDTLMQSTHRGSFSCFGAPLTAPPVAATNVQADKVICNCSFT

Transcript Sequence

Transcript ID

Zm00001d008532_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:11973173:11975079:1 gene:Zm00001d008532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein JAGGED
Sequence

ACCATCCGATATATACCCCGTCCTCCACTTCTGTTTTCCCTCGATCTCCTTCAAAATAAA
CCGCCATTGCATCATAGTGTTCATCTGTCACTCCACCATGAGGCAAGACGGGAGCCCATT
GGACCTCAACAACTTGCCGGAGGAGTACGGCAAGCAAGCGGCAGAGAGCTCCACGACCAC
CGCCACATCAAGCGTTCATGCAGTTATTAGGCCAAAGAAGACGAAGAGCGGTAGAGGGAA
GGATGCTGCTGCGAAGGTGTATGAGTGCCGGTTTTGCTCCCTCAAGTTCGGCAAGTCTCA
AGCGCTTGAGAGGGAGACTGAAACCCTTAACCGTGCCCGGCAACTCGTCTTCGGCAACGA
GAGCCTCGCCGTCGCCGCCGTCGGCGCGCAGATGAGTTTCAGGGATGTAAATATGGCAGG
TGCTGCCCCACCGACCGTACTCGGAGTCGGAGGGAACTTCCGGGGAGGCGCCGCCGGTGG
CGGCAGCATCGGCGACCTGTGCGTCCCGTTCCGGCCGGTGCTGTCGCCGCAGCCTTCGTA
CCATTACCTCTACACGGCGCCATCAACATTGCACCCGATGAGCTACCCGGCGACGTACCC
TGGCCCACTGCGCCAGCCTGCTGTCGACGACTACATCATCGGCCACGCAGTCTCCGCCGG
CGGGGACACACTAATGCAATCGACACACCGCGGCAGCTTCTCCTGCTTCGGAGCTCCACT
CACCGCTCCGCCGGTGGCGGCAACGAACGTGCAGGCCGACAAAGTTATCTGCAACTGCAG
CTTCACTTGAATGCCTCCGGCCGGCTCCACTTGAGCAGATGCATGTAGTTAAGTTAGTGT
AAAGAGCCAAGAATTTAAATTAGATGTTGCGTGTTTTGGACATTAAATACAGAATGAAGT
CTTCCGGGTTCTA