Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008525_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:11668954:11672834:1 gene:Zm00001d008525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase 1
Sequence

ATGATGAACATGAAGGAGTATGATGGAGTTAGTGAAGTAAAATCCACTTTGCAATCAGCT
TTTGCTAAGCTAATGACAGCAAGTAAAGACATGGTTTCTGAAGCAGTTGCAAAACTGATC
AGTCGCCTGAATACTGAGAGCAAGATTAGGACCTTAACAGACAAAGAACAGCTGCTTTTG
TCCTTGGAGAGACAATATCAAGACGATGTTGGTGTTCTAGCAGCACTTTTTTTTAACTAT
GTCAAGCTCAGTCCTGGCGAAGCGCTTTATATTGGTGCAAATGAACCGCATGCATACCTC
TCGGGGGAATGCATTGAATGTATGGCCACCTCAGACAACGTTGTACGCGCTGGTTTGACA
CCTAAATACAGAGACGTGCAAACTCTCTGCTCAATGCTAACATACAAACAGGCTTTCCCA
GAAATTTTGCGCGGAGTTCCTGTGCAGCCACACGTAAGGCGCTACACCCCTCCATTTAAC
GAGTTCGAGGTCGATCGCTGCTTGGTGCCTCCAGGTGGATCGCTGGTTGTCGTACCCCCG
GTACCAGGTCCATCCATCTTTCTCGTAATGACCGGGGCAGGCGAGATTCAGTTGGATTCT
GCGTCAGATGGAGAAAAGGCAGACGAAGGTGATGTTTTCTTCGTCCCAGCATACACTGAG
GTTAAGATCTCTGCGTGTGGCCCCGAGTCTCTGCAGCTGTACAGGGCCGGGGTAAACAGC
AGGTTCTTCAGCTAA

Peptide Sequence

PEP ID

Zm00001d008525_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:11668954:11672834:1 gene:Zm00001d008525 transcript:Zm00001d008525_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase 1
Sequence

MMNMKEYDGVSEVKSTLQSAFAKLMTASKDMVSEAVAKLISRLNTESKIRTLTDKEQLLL
SLERQYQDDVGVLAALFFNYVKLSPGEALYIGANEPHAYLSGECIECMATSDNVVRAGLT
PKYRDVQTLCSMLTYKQAFPEILRGVPVQPHVRRYTPPFNEFEVDRCLVPPGGSLVVVPP
VPGPSIFLVMTGAGEIQLDSASDGEKADEGDVFFVPAYTEVKISACGPESLQLYRAGVNS
RFFS

Transcript Sequence

Transcript ID

Zm00001d008525_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:11668954:11672834:1 gene:Zm00001d008525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase 1
Sequence

TTTGTACCATTCTGAAGGAGCTCAAGGATGTCCTGAGGACAATTCCTGAAATCCAAGGCC
TAGTTGGGCATGAAGATACTGGCAAGATGATGAACATGAAGGAGTATGATGGAGTTAGTG
AAGTAAAATCCACTTTGCAATCAGCTTTTGCTAAGCTAATGACAGCAAGTAAAGACATGG
TTTCTGAAGCAGTTGCAAAACTGATCAGTCGCCTGAATACTGAGAGCAAGATTAGGACCT
TAACAGACAAAGAACAGCTGCTTTTGTCCTTGGAGAGACAATATCAAGACGATGTTGGTG
TTCTAGCAGCACTTTTTTTTAACTATGTCAAGCTCAGTCCTGGCGAAGCGCTTTATATTG
GTGCAAATGAACCGCATGCATACCTCTCGGGGGAATGCATTGAATGTATGGCCACCTCAG
ACAACGTTGTACGCGCTGGTTTGACACCTAAATACAGAGACGTGCAAACTCTCTGCTCAA
TGCTAACATACAAACAGGCTTTCCCAGAAATTTTGCGCGGAGTTCCTGTGCAGCCACACG
TAAGGCGCTACACCCCTCCATTTAACGAGTTCGAGGTCGATCGCTGCTTGGTGCCTCCAG
GTGGATCGCTGGTTGTCGTACCCCCGGTACCAGGTCCATCCATCTTTCTCGTAATGACCG
GGGCAGGCGAGATTCAGTTGGATTCTGCGTCAGATGGAGAAAAGGCAGACGAAGGTGATG
TTTTCTTCGTCCCAGCATACACTGAGGTTAAGATCTCTGCGTGTGGCCCCGAGTCTCTGC
AGCTGTACAGGGCCGGGGTAAACAGCAGGTTCTTCAGCTAACAGGCGCGTCGATCTTTGG
GGCTGTCGTAAAGTGACCACACTGTAGTTGTAGGGAAGTTGTCATATACGAGAAATGAAA
CGGTTAGTTAGCAAAAAGGTCTCATATATACTAATGTATAGGGCTGTAGGCTGATGAAAG
AATAATCTGGTTCCTTTCATATCTTCTTGATAATTCACTGTAAAGATGCCTTGCAGTGCA
ATCCACGTTGGATGCGCTAGAAAGAAATAAAGATG