Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008411_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:8:8047906:8050763:1 gene:Zm00001d008411 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	ATGGCAGTCTCTGCTGCCACCAAGCTCCAGCGCCTTAGGCATTTGTCATGGTACTTCAAA CAATCTGCTAAGACTATGGAGCAACAATTCCAAAAGGAGACTAGGTTCTACGGCTCCTTA ATAAGATTGCAGCAGAACTGGAAAGTGAAGCGGCAGCGGGCTGTTGGGAGTCCAGGAAGT GAAGGCTTCATGTTTGATCTAGTTGATAGTTCTCAGCTAGACACAACAACAGTGCTTCGA TTATCACCATTATCTTTAATTCCGATTGATCAAGACTCTTCAGGCACTTTGTCTGTACAA ATTCCACAGAAGTCTTTGCGTTCCTTGAGCCTTAAATTTCATGGAGACATAGTCAATAAT GCAGAAAGCAGTGCTATCAAAAAGAAAGAAGGCACATTAACCAACACTACTGCTGAAGCC GAAAAGGATGTTTTGGCAGATGATGATGTCAATAAGTCTATTAGATATGCACATTCCATC CTTCGTGACATCCACAAGTCCATATTTGAGGAGCAGGTATTTGATATGGTGATCCGGGAG ACGTTTAACCAGTCTCAAGGCATCAATGTTACTGGGATGTGCGAAGATTTTCTCCAATTA GCTATTGGCCAGGAGTGTTCGTTGTGCCTTTCGCTTGAGCTCTCTGGACAGAACAATAAC GCAGGAACAGTAGGACAGCAAGATCATATGGATACAAATTATCCTGGAAATCTTGCAGTA GCCACTGTAAATGGGAAGGAGTCCTCAAATAAGGATGTGAGAGGGTTTCCTAACCCCAAA AGCTTAGAAATCTACCTGCTCCATATGTTCCATGAAATTCTTAGGAAACTCAGGGAGAAA TCTCGTCATGTGGTTCGCTACCAGAGTTCTGCTCAGGCTGCACCTGACGATTGTGGCCTG CTAAGCCATTTTTGCATGACAGTGGCTCACAGGATATTTTCTAACAAAGTACATTTGGAG CTGGAAAGCGTGGTTAGTAGGGTTCCTTATCTCCATCTGCGTTCCCTTCCTACATGGCAT TCTCGAACTTCTTCCTGGTCTCTCTGCTTGAAAGTTCCTCAGCCTATCCTGGCCACCGGT CGAGTCACAAAGCCTTCAGACTATCACGAGCTGAAGTACAAATCCAGGTCGCAGTTTAGT ACAAAGGTGATCTTGAAAGATGGCCAAATTAGTTTAATGGGTGAGGGCTCCCCAAGCATT GTTGGGTCCTTGACTGGGAAGCCATCTGATTCACGTCTGATAAATAGTTACAATTGTGAC TTGGAAGACCTCCCAATGATGCTTCTGCAGCAGGTCGCCAGTCAAGTAATCCACTGGCTC CATGATGAAGCGATGATTCTTGGGATGAACGTGACCAGAGATTTCCTGTGCCTGTACTTT GACCTTGGCCAAGGCGAAACACTTGGTCTATTGGCACATGTCGACCCGGATGACACCTAT GGCTGCATCTCATGGTACCTCACTGTTGAACACCCAATGGAGGAGGGGAAGATGTCAGCT GGCAGTCCAGAGTCAGAGAAGCGAAGGTTTTTGGGGTACCTTTCCCTGGAAGTGCTTTAC TCTACCCTGATGGACCTGATAAAATTGTGCAGCACAAGTGATCAAATTCGTGCCTCTTGA

Peptide Sequence

PEP ID	Zm00001d008411_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:8:8047906:8050763:1 gene:Zm00001d008411 transcript:Zm00001d008411_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	MAVSAATKLQRLRHLSWYFKQSAKTMEQQFQKETRFYGSLIRLQQNWKVKRQRAVGSPGS EGFMFDLVDSSQLDTTTVLRLSPLSLIPIDQDSSGTLSVQIPQKSLRSLSLKFHGDIVNN AESSAIKKKEGTLTNTTAEAEKDVLADDDVNKSIRYAHSILRDIHKSIFEEQVFDMVIRE TFNQSQGINVTGMCEDFLQLAIGQECSLCLSLELSGQNNNAGTVGQQDHMDTNYPGNLAV ATVNGKESSNKDVRGFPNPKSLEIYLLHMFHEILRKLREKSRHVVRYQSSAQAAPDDCGL LSHFCMTVAHRIFSNKVHLELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILATG RVTKPSDYHELKYKSRSQFSTKVILKDGQISLMGEGSPSIVGSLTGKPSDSRLINSYNCD LEDLPMMLLQQVASQVIHWLHDEAMILGMNVTRDFLCLYFDLGQGETLGLLAHVDPDDTY GCISWYLTVEHPMEEGKMSAGSPESEKRRFLGYLSLEVLYSTLMDLIKLCSTSDQIRAS

Transcript Sequence

Transcript ID	Zm00001d008411_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:8047906:8050763:1 gene:Zm00001d008411 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 17
Sequence	GCAGGTTGAGGCTAACGACGCTGTGGCAGTCGCCTCGACAACGAAGCCCAAGTCGCAGCC AAATGAAATACTGGTTGACATGGCAGTCTCTGCTGCCACCAAGCTCCAGCGCCTTAGGCA TTTGTCATGGTACTTCAAACAATCTGCTAAGACTATGGAGCAACAATTCCAAAAGGAGAC TAGGTTCTACGGCTCCTTAATAAGATTGCAGCAGAACTGGAAAGTGAAGCGGCAGCGGGC TGTTGGGAGTCCAGGAAGTGAAGGCTTCATGTTTGATCTAGTTGATAGTTCTCAGCTAGA CACAACAACAGTGCTTCGATTATCACCATTATCTTTAATTCCGATTGATCAAGACTCTTC AGGCACTTTGTCTGTACAAATTCCACAGAAGTCTTTGCGTTCCTTGAGCCTTAAATTTCA TGGAGACATAGTCAATAATGCAGAAAGCAGTGCTATCAAAAAGAAAGAAGGCACATTAAC CAACACTACTGCTGAAGCCGAAAAGGATGTTTTGGCAGATGATGATGTCAATAAGTCTAT TAGATATGCACATTCCATCCTTCGTGACATCCACAAGTCCATATTTGAGGAGCAGGTATT TGATATGGTGATCCGGGAGACGTTTAACCAGTCTCAAGGCATCAATGTTACTGGGATGTG CGAAGATTTTCTCCAATTAGCTATTGGCCAGGAGTGTTCGTTGTGCCTTTCGCTTGAGCT CTCTGGACAGAACAATAACGCAGGAACAGTAGGACAGCAAGATCATATGGATACAAATTA TCCTGGAAATCTTGCAGTAGCCACTGTAAATGGGAAGGAGTCCTCAAATAAGGATGTGAG AGGGTTTCCTAACCCCAAAAGCTTAGAAATCTACCTGCTCCATATGTTCCATGAAATTCT TAGGAAACTCAGGGAGAAATCTCGTCATGTGGTTCGCTACCAGAGTTCTGCTCAGGCTGC ACCTGACGATTGTGGCCTGCTAAGCCATTTTTGCATGACAGTGGCTCACAGGATATTTTC TAACAAAGTACATTTGGAGCTGGAAAGCGTGGTTAGTAGGGTTCCTTATCTCCATCTGCG TTCCCTTCCTACATGGCATTCTCGAACTTCTTCCTGGTCTCTCTGCTTGAAAGTTCCTCA GCCTATCCTGGCCACCGGTCGAGTCACAAAGCCTTCAGACTATCACGAGCTGAAGTACAA ATCCAGGTCGCAGTTTAGTACAAAGGTGATCTTGAAAGATGGCCAAATTAGTTTAATGGG TGAGGGCTCCCCAAGCATTGTTGGGTCCTTGACTGGGAAGCCATCTGATTCACGTCTGAT AAATAGTTACAATTGTGACTTGGAAGACCTCCCAATGATGCTTCTGCAGCAGGTCGCCAG TCAAGTAATCCACTGGCTCCATGATGAAGCGATGATTCTTGGGATGAACGTGACCAGAGA TTTCCTGTGCCTGTACTTTGACCTTGGCCAAGGCGAAACACTTGGTCTATTGGCACATGT CGACCCGGATGACACCTATGGCTGCATCTCATGGTACCTCACTGTTGAACACCCAATGGA GGAGGGGAAGATGTCAGCTGGCAGTCCAGAGTCAGAGAAGCGAAGGTTTTTGGGGTACCT TTCCCTGGAAGTGCTTTACTCTACCCTGATGGACCTGATAAAATTGTGCAGCACAAGTGA TCAAATTCGTGCCTCTTGATCGACATAAGTGGATGAAATGATGTATGTCCGTGCAGTGTT TAAGAGTATGTAAATTGAGGCATTATGTGCACCTTTTGTTTGCTAATAGGATGTTTGGCT TGAAAAATGGAGTCCATCCTCTCACTCTTCAGTATGTTTGTTTGGTTCATGAATGAAATA AGCTGATACATCACCATCTTATTTCACTAAGTTAATAATTAGTATTAGCATGT