Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008389_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:8:7021994:7027546:1 gene:Zm00001d008389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine-1-phosphate lyase
Sequence	ATGGAGGCGGCGGCGGAGCTGGCGCTGCGCCTCCGGGCGGCCGCCAACGACCGCCTCGCT CGCTACGAGCCGCTGGCGCTCGTCGCCGCGCCGCTCCTGGCGCTCCTCGTCGCGCGGACC CTCCACGCCACGGCCAGCGCCGTCGCCGACCGGGGGCTCGTCGCCATCGCCATCGCCGCC GTCAAGTCAGCGTTCCCCCCGTCCTTCTTGCTTGATATTCCTTATGCCCGCGTCTGCCCG TTGCTGCCGGGAGTCTCCGGCTACATCGCGGCGGAGAAGAAGAAGGTTGTTGACAAGATG CAATCAGGTGGGGCCAAGAACAATCGGCGAGCTGAGTTGCCAACTATTGGCCTTGCCGAG CAAGTGATAGAGGAACTTGAAACACTGAAAGCCAAAGATGTAGACTGGCAGGGAAAATGC TCTGGCACAGTATATATTGCTGGAAGTGAGTCTGAGGGTCATTTTCAATTGATAAACAAG GCGTACTCTATGTTTTCACACACCAATCCGCTCCATCAAGATGTATTTAAGAGCGTAGCA AACATGGAAGCTGAAGTCGTTGCAATGACAGCGGCTTTACTTGGCAGCAAAGAAAAATCA TCTGGTGGACAAATTTGCGGCAACATGACATCAGGTGGAACTGAAAGCATATTATTAGCA GTCAAAACATCACGTGACTATATGCGATCAAAGAAAGGAATTACAAGGCCTGAAATGATA ATTGCTGAATCAGCACATTCTGCATATGACAAAGCTGCTCAATACTTCAATATTAAAGTG CGGCGTGTACCTGTGAACAAAGAGTTTCTTGCAGATGTGAAAGGATTCAAACGATGCATA AATGGAAACACCATAATGATGGTTGGATCTACACCAGGATTTCCGCATGGTTTAATTGAT CCTATTGAGGAACTTGGGGAACTGGCTTCGCGCTATGACATTTGCTTGCATGTTGATTTA TGCCTTGGTGGCTTTGTGCTGCCTTTTGCTCATAAGCTTGGGTACCCTATTCCTCCCTTT GATTTTTCTGTCAAGGGTGTTACATCCATCTCATCTGATGTTCATAAGTACGGATTAGCA CCAAAAGGCACAAGCATTGTCCTGTACAGAAATCATGAAATTAGAAAGCATCAGTTTGTT GCTGTTACTGAGTGGACCGGTGGCCTTTACGTTTCTCCCACAATTGCTGGAAGCAGGCCA GGTGGATTGATAGCGGGAGCTTGGGCTGCTATGATGTCTCTCGGACTGAACGGCTACTTG GACAGTACAAGCCGTATCATGGATGTTTCAAAGAAAATACAAAGAGGGATTGGAGAGATC CCAGGGTTGTTTGTGATAGGGAAACCGGATATGACCGTTGTGGCGTTCGGCTCAGACGTT GTCGACATATTTGAGGTGAACGACATAATGTCATCAAAAGGTTGGCATCTCAATGCTCTG CAGAGACCTAACAGCTTGCATATCTGTGTGACCCTTCAACACACGACTGTTTACGACCAA TTCCTGAAGGATCTGCAAGACTCTGTCAACACTGTGAAAGCAAACCCAGGCCCGATTAGC GGCGGAAAGGCTCCTATCTACGGCGCCGCAGGGAAGATGCCGGACAGAGGCACGGTGAGG GAGCTGCTCGTGGAGTTCATGGACAGCTCTTGCTGA

Peptide Sequence

PEP ID	Zm00001d008389_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:8:7021994:7027546:1 gene:Zm00001d008389 transcript:Zm00001d008389_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine-1-phosphate lyase
Sequence	MEAAAELALRLRAAANDRLARYEPLALVAAPLLALLVARTLHATASAVADRGLVAIAIAA VKSAFPPSFLLDIPYARVCPLLPGVSGYIAAEKKKVVDKMQSGGAKNNRRAELPTIGLAE QVIEELETLKAKDVDWQGKCSGTVYIAGSESEGHFQLINKAYSMFSHTNPLHQDVFKSVA NMEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRSKKGITRPEMI IAESAHSAYDKAAQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSTPGFPHGLID PIEELGELASRYDICLHVDLCLGGFVLPFAHKLGYPIPPFDFSVKGVTSISSDVHKYGLA PKGTSIVLYRNHEIRKHQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMMSLGLNGYL DSTSRIMDVSKKIQRGIGEIPGLFVIGKPDMTVVAFGSDVVDIFEVNDIMSSKGWHLNAL QRPNSLHICVTLQHTTVYDQFLKDLQDSVNTVKANPGPISGGKAPIYGAAGKMPDRGTVR ELLVEFMDSSC

Transcript Sequence

Transcript ID	Zm00001d008389_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:7021994:7027546:1 gene:Zm00001d008389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine-1-phosphate lyase
Sequence	ATGGAGGCGGCGGCGGAGCTGGCGCTGCGCCTCCGGGCGGCCGCCAACGACCGCCTCGCT CGCTACGAGCCGCTGGCGCTCGTCGCCGCGCCGCTCCTGGCGCTCCTCGTCGCGCGGACC CTCCACGCCACGGCCAGCGCCGTCGCCGACCGGGGGCTCGTCGCCATCGCCATCGCCGCC GTCAAGTCAGCGTTCCCCCCGTCCTTCTTGCTTGATATTCCTTATGCCCGCGTCTGCCCG TTGCTGCCGGGAGTCTCCGGCTACATCGCGGCGGAGAAGAAGAAGGTTGTTGACAAGATG CAATCAGGTGGGGCCAAGAACAATCGGCGAGCTGAGTTGCCAACTATTGGCCTTGCCGAG CAAGTGATAGAGGAACTTGAAACACTGAAAGCCAAAGATGTAGACTGGCAGGGAAAATGC TCTGGCACAGTATATATTGCTGGAAGTGAGTCTGAGGGTCATTTTCAATTGATAAACAAG GCGTACTCTATGTTTTCACACACCAATCCGCTCCATCAAGATGTATTTAAGAGCGTAGCA AACATGGAAGCTGAAGTCGTTGCAATGACAGCGGCTTTACTTGGCAGCAAAGAAAAATCA TCTGGTGGACAAATTTGCGGCAACATGACATCAGGTGGAACTGAAAGCATATTATTAGCA GTCAAAACATCACGTGACTATATGCGATCAAAGAAAGGAATTACAAGGCCTGAAATGATA ATTGCTGAATCAGCACATTCTGCATATGACAAAGCTGCTCAATACTTCAATATTAAAGTG CGGCGTGTACCTGTGAACAAAGAGTTTCTTGCAGATGTGAAAGGATTCAAACGATGCATA AATGGAAACACCATAATGATGGTTGGATCTACACCAGGATTTCCGCATGGTTTAATTGAT CCTATTGAGGAACTTGGGGAACTGGCTTCGCGCTATGACATTTGCTTGCATGTTGATTTA TGCCTTGGTGGCTTTGTGCTGCCTTTTGCTCATAAGCTTGGGTACCCTATTCCTCCCTTT GATTTTTCTGTCAAGGGTGTTACATCCATCTCATCTGATGTTCATAAGTACGGATTAGCA CCAAAAGGCACAAGCATTGTCCTGTACAGAAATCATGAAATTAGAAAGCATCAGTTTGTT GCTGTTACTGAGTGGACCGGTGGCCTTTACGTTTCTCCCACAATTGCTGGAAGCAGGCCA GGTGGATTGATAGCGGGAGCTTGGGCTGCTATGATGTCTCTCGGACTGAACGGCTACTTG GACAGTACAAGCCGTATCATGGATGTTTCAAAGAAAATACAAAGAGGGATTGGAGAGATC CCAGGGTTGTTTGTGATAGGGAAACCGGATATGACCGTTGTGGCGTTCGGCTCAGACGTT GTCGACATATTTGAGGTGAACGACATAATGTCATCAAAAGGTTGGCATCTCAATGCTCTG CAGAGACCTAACAGCTTGCATATCTGTGTGACCCTTCAACACACGACTGTTTACGACCAA TTCCTGAAGGATCTGCAAGACTCTGTCAACACTGTGAAAGCAAACCCAGGCCCGATTAGC GGCGGAAAGGCTCCTATCTACGGCGCCGCAGGGAAGATGCCGGACAGAGGCACGGTGAGG GAGCTGCTCGTGGAGTTCATGGACAGCTCTTGCTGAATTCATTATGGCTTGTGAGAAGAA TTTGTTCTTGTACATGAAACTTCTATTTCTTTTTCAACTGAAAAGGCAGAGCTCCTACCA TTTGTTTAAAAAAAAAACATTATGGCTTGTGAAAAACAGTCGCAGGGCTGTGATTTGTTG GCCTAGGTATACAAAGTTGTCATTAGGAAAAGCGGGGAAAGTCATTGAGGCGATACAACC ACATGTATTCACGATTACAAGAAGTTTGTCCGTATGATTGTATATCAATATCACAGCATG CATACGCAATGTGTCTGGTT