Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008334_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:5578197:5580631:1 gene:Zm00001d008334 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase

Sequence

ATGGCGTCGTCGTCGTCTACGACCGCTACTACCAGCTGCTGCCCCCTACTGCTGGCGCTC
TTATGGGTCCTCATGGCGGCACACCGCGGCCACGCCGCCGCCGTGTTCACCGGCCTGGTC
TTCGAGAGCCCGGGTGAGGCGGAGGCCTTCGAGGACGCGCTGCTGCGCCAGGCCTGCTTC
AACGTCTCCTTCTTCTTGTCCGCGGGTGGCCGCCGCGAGGCCTGCGTGTCGCGGCTCGAC
ACGGCGCGGGGAGGCGCGGGCAGCGGGCCCGTGCCCGTGCTCCGCGCCGCGCTGCGCGAC
ACGCTCGGCGAGGCCGTGGGCGCCGCGGGAGCGGTCCGGGGGCTCGCCTCGCTGTCCAAC
CACGCGCGCGAGGAGGTAGCGCTGCGCGACTGCGTCGAGCTGCTGGGATACTCCGTCGAC
GAGCTCGGGTGGGCGCTGGACGCTATGGCCGCCGACGACACCGACGACGGCGGCGGCCTG
GAGCTGCTGGACTCGCCCGGCCGCCGCAGCGCCTCAAGCCGCGCCGAGAACGACATCCAC
GCGTGGCTCAGCGCGGCGCTGGGCAACCAGGACACCTGCGTGGCCGGCTTCCACGGCACC
GACGGCCGCCTGCTGCGCCGCGTCGAGGCCGCCGTAGCGCAGCTCACGCAGCTGGTCAGC
AACCTGCTTGCCATGCACAAGCGCCTGCGCAGCATCACGCCGCTGCGCCACGGACCTCCT
AAAAGTAACAGCGCCTCCTCCGGCGCCGGCGACGACGAGCTGCCGCCGTGGGTGATGGAC
GTCGAGGACGAGGAGGAGCTCGTCGCCAAGCGCGCCCGCCGCGCAGGCAGGACGTCGTCG
ACGCGCGTGGACGTCGTGGTGGCGCAGGACGGCAGCGGGCGCTACCGCACCGTCAGCGAG
GCGGTGGCACGGGCGCCCAGCCACAGCAAGAGGAAGTACGTGATCTACGTCAAGCGAGGG
GAGTACCACGAGAACGTGGAAGTCAGGAAGAAGAAGACCAACATCGTCATCGTCGGCGAG
GGCATGGGCGAGACGGTGATCTCCGGCAGCCGGAGCTTCTCCAGCGGCTGGACCACCTTC
CGCAGCGCCACCTTCGCGGTGTCCGGCGCCGGGTTCATCGCGCGGGACCTGACGTTCCGC
AACACGGCGGGTCCGGCGGCGCACCAGGCGGTGGCGCTGCGCGTGGACTCGGACCGCTCC
GCCTTCTTCCGCGTGGCCGTGGAGGGGCACCAGGACACGCTGTACGCGCACTCGCTCCGG
CAGTTCTACCGCGACTGCCGCATCGCCGGCACCGTGGACTTCGTCTTCGGCAACGGCATC
GTCGTGGTGCAGCGCAGCCTCGTCGCCACGCTGCCGCTGGCGCCCGGCCAGACGGGCAGC
GTCACCGCGCAGGGCCGCAAGGACCCCAACCAGAACACGGGCTTCTCCTTCCACGGCTGC
GTGCTGGAGGCCAAGTACCCGACGTACCTGGGCCGCCCGTGGAAGCCCTTCTCGCGGGTC
GTGGTCATGGAGTCCTACCTGGGCTCTGGCATCCAGGCCCGCGGGTGGCTCGAGTGGGCA
GCTGCTGGCTCGGGGGACCACAGCCCGGGCCTCGCCACGCTGTTCTACGGAGAGTACAGG
AACTACGGGCCCGGTGCGGGCGTCGCGGGCCGAGTGAAGTGGCCTGGCTACCACGTGATC
ATGGACGCCGCCGTCGCCAGCCGGTTCACCGTCAGGCGATTCATCGACGGGCTTGCGTGG
TTGCCCGGCACCGGCATCACCTTCACGGCGGATCTATTCAGGAGATGA

Peptide Sequence

PEP ID

Zm00001d008334_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:5578197:5580631:1 gene:Zm00001d008334 transcript:Zm00001d008334_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase

Sequence

MASSSSTTATTSCCPLLLALLWVLMAAHRGHAAAVFTGLVFESPGEAEAFEDALLRQACF
NVSFFLSAGGRREACVSRLDTARGGAGSGPVPVLRAALRDTLGEAVGAAGAVRGLASLSN
HAREEVALRDCVELLGYSVDELGWALDAMAADDTDDGGGLELLDSPGRRSASSRAENDIH
AWLSAALGNQDTCVAGFHGTDGRLLRRVEAAVAQLTQLVSNLLAMHKRLRSITPLRHGPP
KSNSASSGAGDDELPPWVMDVEDEEELVAKRARRAGRTSSTRVDVVVAQDGSGRYRTVSE
AVARAPSHSKRKYVIYVKRGEYHENVEVRKKKTNIVIVGEGMGETVISGSRSFSSGWTTF
RSATFAVSGAGFIARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHSLR
QFYRDCRIAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFHGC
VLEAKYPTYLGRPWKPFSRVVVMESYLGSGIQARGWLEWAAAGSGDHSPGLATLFYGEYR
NYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGITFTADLFRR

Transcript Sequence

Transcript ID

Zm00001d008334_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:5578197:5580631:1 gene:Zm00001d008334 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase

Sequence

GCACTCCTCGCGGACACTGGCAAGACGCATGCAGTGCAGCTTCAGCAATGGCGTCGTCGT
CGTCTACGACCGCTACTACCAGCTGCTGCCCCCTACTGCTGGCGCTCTTATGGGTCCTCA
TGGCGGCACACCGCGGCCACGCCGCCGCCGTGTTCACCGGCCTGGTCTTCGAGAGCCCGG
GTGAGGCGGAGGCCTTCGAGGACGCGCTGCTGCGCCAGGCCTGCTTCAACGTCTCCTTCT
TCTTGTCCGCGGGTGGCCGCCGCGAGGCCTGCGTGTCGCGGCTCGACACGGCGCGGGGAG
GCGCGGGCAGCGGGCCCGTGCCCGTGCTCCGCGCCGCGCTGCGCGACACGCTCGGCGAGG
CCGTGGGCGCCGCGGGAGCGGTCCGGGGGCTCGCCTCGCTGTCCAACCACGCGCGCGAGG
AGGTAGCGCTGCGCGACTGCGTCGAGCTGCTGGGATACTCCGTCGACGAGCTCGGGTGGG
CGCTGGACGCTATGGCCGCCGACGACACCGACGACGGCGGCGGCCTGGAGCTGCTGGACT
CGCCCGGCCGCCGCAGCGCCTCAAGCCGCGCCGAGAACGACATCCACGCGTGGCTCAGCG
CGGCGCTGGGCAACCAGGACACCTGCGTGGCCGGCTTCCACGGCACCGACGGCCGCCTGC
TGCGCCGCGTCGAGGCCGCCGTAGCGCAGCTCACGCAGCTGGTCAGCAACCTGCTTGCCA
TGCACAAGCGCCTGCGCAGCATCACGCCGCTGCGCCACGGACCTCCTAAAAGTAACAGCG
CCTCCTCCGGCGCCGGCGACGACGAGCTGCCGCCGTGGGTGATGGACGTCGAGGACGAGG
AGGAGCTCGTCGCCAAGCGCGCCCGCCGCGCAGGCAGGACGTCGTCGACGCGCGTGGACG
TCGTGGTGGCGCAGGACGGCAGCGGGCGCTACCGCACCGTCAGCGAGGCGGTGGCACGGG
CGCCCAGCCACAGCAAGAGGAAGTACGTGATCTACGTCAAGCGAGGGGAGTACCACGAGA
ACGTGGAAGTCAGGAAGAAGAAGACCAACATCGTCATCGTCGGCGAGGGCATGGGCGAGA
CGGTGATCTCCGGCAGCCGGAGCTTCTCCAGCGGCTGGACCACCTTCCGCAGCGCCACCT
TCGCGGTGTCCGGCGCCGGGTTCATCGCGCGGGACCTGACGTTCCGCAACACGGCGGGTC
CGGCGGCGCACCAGGCGGTGGCGCTGCGCGTGGACTCGGACCGCTCCGCCTTCTTCCGCG
TGGCCGTGGAGGGGCACCAGGACACGCTGTACGCGCACTCGCTCCGGCAGTTCTACCGCG
ACTGCCGCATCGCCGGCACCGTGGACTTCGTCTTCGGCAACGGCATCGTCGTGGTGCAGC
GCAGCCTCGTCGCCACGCTGCCGCTGGCGCCCGGCCAGACGGGCAGCGTCACCGCGCAGG
GCCGCAAGGACCCCAACCAGAACACGGGCTTCTCCTTCCACGGCTGCGTGCTGGAGGCCA
AGTACCCGACGTACCTGGGCCGCCCGTGGAAGCCCTTCTCGCGGGTCGTGGTCATGGAGT
CCTACCTGGGCTCTGGCATCCAGGCCCGCGGGTGGCTCGAGTGGGCAGCTGCTGGCTCGG
GGGACCACAGCCCGGGCCTCGCCACGCTGTTCTACGGAGAGTACAGGAACTACGGGCCCG
GTGCGGGCGTCGCGGGCCGAGTGAAGTGGCCTGGCTACCACGTGATCATGGACGCCGCCG
TCGCCAGCCGGTTCACCGTCAGGCGATTCATCGACGGGCTTGCGTGGTTGCCCGGCACCG
GCATCACCTTCACGGCGGATCTATTCAGGAGATGACGATGGCCAGCGCTAATGCAGTTGC
TTGATTGGGTTACAGTATTTTTTTTGAAGGGTGCACAAAATAAGGATATTTTAGTATCAT
ATTATAAAGATCATAAGTATTGCTAACCACAAAATAAGGACATATTATATTATAATGATG
AATATAAAATTGCCTTTTTTTTGGGACATAGGGATATAAGGTGTTAACTTTGTGCGTTTT
TCCTTGAGTTGATATCACTTTGGTAAGTAATTAGGGTTGTAATGTGTTGCAAACTAAGTA
TGTACGTAAAAACGTAATTGTGTTATATTGGTACAGAAAGACCCTAAGATGTAAACTGAA
CAAGTATATAATTGTTCTATTTTATGAGATAACTAGATATGTGTCCGTGCGTTGCCATGA
GGCGATGGGAGCATGGGTTTCCGT