Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008331_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:5481789:5500666:1 gene:Zm00001d008331 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence

ATGGCCGAGGCAGCTGCTGAGAAGCTGGTCTGCGTGACCGGAGCTGGAGGCTTCATCGGG
TCATGGCTGGTCAAGGAGCTGCTCCAACGCGGCTACGTTGTGAGGGGCACCGCGAGGCAC
CCTGAGGACCCCAAGAATGCCCATCTGCTGGCACTGGATGGAGCTCAAGAACGGCTATCT
CTGTACCATGCTGACGTGCTGGACTACATGTCGCTTTGTCGTGCGTTCAGCTTATGTCAT
GGTGTCTTCCATGTTGCCTCCCCGGTGTCGAATGATCCTAACCTTGTGCCGGTTGCTGTT
GAGGGAACAAAGAACGTTCTGAACGCTGCAGCAGACATGGGAGTGCAACGTGTGGTGTTC
ACCTCATCTTACGGAGCTATCCACATGAACCCTAACAGGAGCCCTGACCAGACTCTGGAC
GAGGGTTGTTGGAGTGACCCTGAATTCTGCAAACAAACACAGAACTGGTATTGCTATGCA
AAGATGGCTGCTGAAAACACTGCAATGGAAGAGGCATTAAAGAGAGGGATACAACTACTA
ATAGTTGTCCCATCAGTGACAATAGGTAGAATGCTACAACCAACATTAAACATAAGTTTA
GCCAATGTTGCTGCCTACATGATGGGCACAAAGAAGGCATACTCAAATGTAATTGGCGGA
TATGTCGATGTGCAAGACGTTGCCCTTGCCCATATTTTGGTGTATGAAGATTTACGCACG
CATGGGCGGTACCTCTGCATAGGTGACATGCTACATCTATCAAAGTATGTTCAAATGATG
AGAGAACTCTTCCCACAATACCCGATCACCAACAAATGCAAGGATGAAAACAAGCCAATG
GTTAAGCCTTACAAGTTCTCCACAAAACGCCTTGGTGCTTTGGGTATGAAGTTCACTACT
TTGAAAGAGAGTTTATACAACACAGTGGTCAGCCTACAGGAGAATGGTCATATCCCAATA
TTGCTACATAAGTCATCCCTATGA

Peptide Sequence

PEP ID

Zm00001d008331_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:5481789:5500666:1 gene:Zm00001d008331 transcript:Zm00001d008331_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence

MAEAAAEKLVCVTGAGGFIGSWLVKELLQRGYVVRGTARHPEDPKNAHLLALDGAQERLS
LYHADVLDYMSLCRAFSLCHGVFHVASPVSNDPNLVPVAVEGTKNVLNAAADMGVQRVVF
TSSYGAIHMNPNRSPDQTLDEGCWSDPEFCKQTQNWYCYAKMAAENTAMEEALKRGIQLL
IVVPSVTIGRMLQPTLNISLANVAAYMMGTKKAYSNVIGGYVDVQDVALAHILVYEDLRT
HGRYLCIGDMLHLSKYVQMMRELFPQYPITNKCKDENKPMVKPYKFSTKRLGALGMKFTT
LKESLYNTVVSLQENGHIPILLHKSSL

Transcript Sequence

Transcript ID

Zm00001d008331_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:5481789:5500666:1 gene:Zm00001d008331 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cinnamoyl-CoA reductase 1
Sequence

AATTAAGTTGAGCCACAAGAGCTAGAGCAGAGGAGCACCAGTGTTCACAGCATCAACCGA
TCGATTGTCGGAGCCACGACCATGGCCGAGGCAGCTGCTGAGAAGCTGGTCTGCGTGACC
GGAGCTGGAGGCTTCATCGGGTCATGGCTGGTCAAGGAGCTGCTCCAACGCGGCTACGTT
GTGAGGGGCACCGCGAGGCACCCTGAGGACCCCAAGAATGCCCATCTGCTGGCACTGGAT
GGAGCTCAAGAACGGCTATCTCTGTACCATGCTGACGTGCTGGACTACATGTCGCTTTGT
CGTGCGTTCAGCTTATGTCATGGTGTCTTCCATGTTGCCTCCCCGGTGTCGAATGATCCT
AACCTTGTGCCGGTTGCTGTTGAGGGAACAAAGAACGTTCTGAACGCTGCAGCAGACATG
GGAGTGCAACGTGTGGTGTTCACCTCATCTTACGGAGCTATCCACATGAACCCTAACAGG
AGCCCTGACCAGACTCTGGACGAGGGTTGTTGGAGTGACCCTGAATTCTGCAAACAAACA
CAGAACTGGTATTGCTATGCAAAGATGGCTGCTGAAAACACTGCAATGGAAGAGGCATTA
AAGAGAGGGATACAACTACTAATAGTTGTCCCATCAGTGACAATAGGTAGAATGCTACAA
CCAACATTAAACATAAGTTTAGCCAATGTTGCTGCCTACATGATGGGCACAAAGAAGGCA
TACTCAAATGTAATTGGCGGATATGTCGATGTGCAAGACGTTGCCCTTGCCCATATTTTG
GTGTATGAAGATTTACGCACGCATGGGCGGTACCTCTGCATAGGTGACATGCTACATCTA
TCAAAGTATGTTCAAATGATGAGAGAACTCTTCCCACAATACCCGATCACCAACAAATGC
AAGGATGAAAACAAGCCAATGGTTAAGCCTTACAAGTTCTCCACAAAACGCCTTGGTGCT
TTGGGTATGAAGTTCACTACTTTGAAAGAGAGTTTATACAACACAGTGGTCAGCCTACAG
GAGAATGGTCATATCCCAATATTGCTACATAAGTCATCCCTATGAGGAACAAGGATACAA
AAGATAGATTTCAACAAGATGGTGTTAATGCCTCAGTTGGTATACATGGACTATGTATGA
ACATGAGAAATATGATTCTAAAAGTGAATAACCACTCAAATTGTCCAATAAATAAAATAT
GGCAAACTTGAAGTTGTTGTTCAATGTCTTTTTTTGGAAGAAGTTGGTGAGCATATATTC
CTATTTTTCTGAAAGTATCCTTCAATATGAGTATATCACAATGTAATGTCCAACCATATG
AGCACTCAACTTTTTTATAATTCAAACCAATAATCAAATGTTCTTGT