Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008322_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:5172219:5181074:1 gene:Zm00001d008322 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 328 description:Zinc finger CCCH domain-containing protein 58
Sequence

ATGGAGCCGCCGCACGCCGAGCAGGCCGTCGCCGCTGTAGCAGCAGGAGGAGAGGGCGGC
ACCGCAAGCCCGGGCACCGGCCTCGAAGGGCCGGTGCTTAGGCGGGGGCTGGACGGCGGT
GGGGAAGGGGAGGACGGGGAGCTGGGGGCGGGGCAGGAGGCGAACGCACGGCTACCAGAG
CGGCCTGGCGAGGCGGACTGTGGCTACTACCTCCGCACGGGCGCCTGCGGCTTCGGGGAG
CGTTGCCGCTACAACCATCCCCGCGATCGTGGCGGCACTGAGTTTGGTGGAGGTGCCAAG
AATGGCGCAGCACAAGACTTTCCAGAACGACAGGGCCAACCTGTATGCGAGTATTATTTG
AAGACTGGAACTTGTAAATTTGGTTCCAATTGCAAATATCACCATCCTAAGCAAGATGGA
TCTGTGCAGTCTGTTATATTAAACAACAATGGATTCCCTCTACGCCTGGGTGAGAAAGAA
TGCTCCTACTATATGAAGACTGGGCAATGCAAGTTTGGTTCTACATGTAAATTTCATCAT
CCAGAATTTGGTGGTATTCCGGTGACCCCTGGAATATATCCACCATTACAATCACCTTCT
GTGCCCTCCCCTCATACATATGCTCCAAATTGGCAAATGGGAAGATCACCTGCAGTTCCT
GGATCATATATACCAGGCTCATACACTCCAATGATGATCTCATCTGGAATGGTTCCATTG
CAAGGATGGAGCCCTTATCCGGCATCGGTAAATCCTGTGGCATCAGGTGGAGCACAACAA
ACTGTTCAAGCTGGACCATTATATGGTATAGGACACCATGGATCTTCCACCGCAATTGCT
TATGGTGGTACATACTTGCCATATTCTTCCTCAGCTGGACAATCGAGCAATAATCATCAA
GAACATGGATTTCCTGAGCGACCAGGGCAGCCTGAGTGTCAATATTATATGAGGACTGGC
GATTGCAAATTTGGAACTACGTGTAAATATAACCATCCTCGAGATTGGAGCACTCCTAAG
TCCAATTACATGTTCAGCCATCTATGCCTTCCACTTCGTCCGGGTGCTCAGCCTTGTGCG
TACTATGCCCAAAATGGATATTGCAGATATGGAGTTGCATGCAAATATGATCACTCAATG
GGTACACTAGGCTACAGTTCATCTGCTTTGCCACTATCTGACATGCCAATTGCTCCCTAT
CCTATTAGCTTCTCCGTTGCCACGTTGGCTCCATCTTCGTCTTCCCCAGAATATATTTCA
ACTAAAGATCCATCTATCAATCATGTAGTATCACCAGTGGCAGGACCCGCGCCTGTTGGA
GCAATCTTGCCAAAAGGGGTATTCCATCATGATACCATTATGCAAACTCAGACTCCTACA
AGTGCCGGCAGTTCAAGCCCTGGTGGTGGGCGCTGA

Peptide Sequence

PEP ID

Zm00001d008322_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:5172219:5181074:1 gene:Zm00001d008322 transcript:Zm00001d008322_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 328 description:Zinc finger CCCH domain-containing protein 58
Sequence

MEPPHAEQAVAAVAAGGEGGTASPGTGLEGPVLRRGLDGGGEGEDGELGAGQEANARLPE
RPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVCEYYL
KTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRLGEKECSYYMKTGQCKFGSTCKFHH
PEFGGIPVTPGIYPPLQSPSVPSPHTYAPNWQMGRSPAVPGSYIPGSYTPMMISSGMVPL
QGWSPYPASVNPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSSSAGQSSNNHQ
EHGFPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKSNYMFSHLCLPLRPGAQPCA
YYAQNGYCRYGVACKYDHSMGTLGYSSSALPLSDMPIAPYPISFSVATLAPSSSSPEYIS
TKDPSINHVVSPVAGPAPVGAILPKGVFHHDTIMQTQTPTSAGSSSPGGGR

Transcript Sequence

Transcript ID

Zm00001d008322_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:5172219:5181074:1 gene:Zm00001d008322 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 328 description:Zinc finger CCCH domain-containing protein 58
Sequence

GAGACAGCGCGAGACAGAGGCAGCGGAAAAATAGCTAGACAAAGACAAGAGAGAGGAAGG
AAATAGTGTCCTGCCCCACACCACAGTGGTGGAAGGAAAGGAAACGGGAGGGAGAGAAAA
ACCCAGGCCCCCCGATCTCCTCCTCCCACTCCGATCGCCCGACCGATCGCCGAGCTTCCC
TGTTCCCTCCCCGCCCCCGCGACGCCGCGACGCCATGGAGCCGCCGCACGCCGAGCAGGC
CGTCGCCGCTGTAGCAGCAGGAGGAGAGGGCGGCACCGCAAGCCCGGGCACCGGCCTCGA
AGGGCCGGTGCTTAGGCGGGGGCTGGACGGCGGTGGGGAAGGGGAGGACGGGGAGCTGGG
GGCGGGGCAGGAGGCGAACGCACGGCTACCAGAGCGGCCTGGCGAGGCGGACTGTGGCTA
CTACCTCCGCACGGGCGCCTGCGGCTTCGGGGAGCGTTGCCGCTACAACCATCCCCGCGA
TCGTGGCGGCACTGAGTTTGGTGGAGGTGCCAAGAATGGCGCAGCACAAGACTTTCCAGA
ACGACAGGGCCAACCTGTATGCGAGTATTATTTGAAGACTGGAACTTGTAAATTTGGTTC
CAATTGCAAATATCACCATCCTAAGCAAGATGGATCTGTGCAGTCTGTTATATTAAACAA
CAATGGATTCCCTCTACGCCTGGGTGAGAAAGAATGCTCCTACTATATGAAGACTGGGCA
ATGCAAGTTTGGTTCTACATGTAAATTTCATCATCCAGAATTTGGTGGTATTCCGGTGAC
CCCTGGAATATATCCACCATTACAATCACCTTCTGTGCCCTCCCCTCATACATATGCTCC
AAATTGGCAAATGGGAAGATCACCTGCAGTTCCTGGATCATATATACCAGGCTCATACAC
TCCAATGATGATCTCATCTGGAATGGTTCCATTGCAAGGATGGAGCCCTTATCCGGCATC
GGTAAATCCTGTGGCATCAGGTGGAGCACAACAAACTGTTCAAGCTGGACCATTATATGG
TATAGGACACCATGGATCTTCCACCGCAATTGCTTATGGTGGTACATACTTGCCATATTC
TTCCTCAGCTGGACAATCGAGCAATAATCATCAAGAACATGGATTTCCTGAGCGACCAGG
GCAGCCTGAGTGTCAATATTATATGAGGACTGGCGATTGCAAATTTGGAACTACGTGTAA
ATATAACCATCCTCGAGATTGGAGCACTCCTAAGTCCAATTACATGTTCAGCCATCTATG
CCTTCCACTTCGTCCGGGTGCTCAGCCTTGTGCGTACTATGCCCAAAATGGATATTGCAG
ATATGGAGTTGCATGCAAATATGATCACTCAATGGGTACACTAGGCTACAGTTCATCTGC
TTTGCCACTATCTGACATGCCAATTGCTCCCTATCCTATTAGCTTCTCCGTTGCCACGTT
GGCTCCATCTTCGTCTTCCCCAGAATATATTTCAACTAAAGATCCATCTATCAATCATGT
AGTATCACCAGTGGCAGGACCCGCGCCTGTTGGAGCAATCTTGCCAAAAGGGGTATTCCA
TCATGATACCATTATGCAAACTCAGACTCCTACAAGTGCCGGCAGTTCAAGCCCTGGTGG
TGGGCGCTGATTTTACTGAGCTGGTGGGAGTGATCCTCTCATCATAAATTTTCTATCACT
TGACACAGTTCTGATAGGCCTCTCCAATGTGAATAAGCTGTGGTCTCTGTAGAGAAGCTG
CGGCGAGGGTGGGTTTCTTTACCATCAGAATAAGAGAGCATTGATAGGTCACACGCAAGC
TCGATTCACTAGCAATTTTGGGTTCTTCCGTTCATGTCCAAAACGGGAAAAAGGAAAGGT
TTTTGAATGTCAGGTTCCGTAGAGCATATTGGGCGCCTTGGTGGGGCTCAGGTCCATACC
CTCGGTAAATAATTCTCAGGCAAGAAAATTTTCGTTGTTATCAAGAAAATTTTCACATGC
AGAGTTACTGGGTTCCTCCACCTTTCAATTTTTCTCTTTCCTTTTGTTTTCTGTATTTCG
TCATACTGGGAGCAAGGCGCATTGTAATGGATAAAAAATGCTTAATTGAAGAGATCTTGC
TGTCAATACTGAAATGGCTCTATTCACGAGCTCGACTTGACACTTATATATTACGTCCAT
GTCCATT