Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008316_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:4970720:4972237:-1 gene:Zm00001d008316 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGTCCCCGCCACTGTCGCCTGCGCTTCATCGTCTCCTCTCCTTCCTCCCGCGT CTCGCCTCCCCACGGCACCTACTGCAGGCGCACGCCTTCCTCCTTCCCCGCGGCGGCCAA CGCGACCCGCGTCTCCTTTCCGCGCTCCTCCTCGCTTCCCTCTGCCTCGTGCCTCACTCG CAGCAAACCAGTGACCACGCCGCCGCGCTCCTCCGTCGTGTATACCCCTCTGTATACCTC AGGGACGTCGCGCGCCTCCCGCCGCATCTCCTCCGCAGGAGCCTCCTCGGCCAGCTCCAC TCCCTGCTCCTCCGCACCGGCCACGTGGCCTCCGACGCTCACGTCTCCTCCAGCCTCGTC CAACTGTACTGCACCTGCGGACATGTCGCCGACGCGCGCAGCGTGTTCGACGAGATGGCC GTCAGGGACGTTGTGGCCTGGAACGTTATGATCGCCGGCTATGTGAAGGCTGGGGACCAG GCCCACGCGCGGGAGCTGTTTGATGCTATGCCGGAGCGGAATGTGGTGTCGTGGACGACG GTGATCGGGGGGTACGCGCAGATGAAGCGTCCGGAGAAGGCAGTAGAGGTGTTTCGAAGG ATGCAGGTGGAGGGCATCGAGGCTGACGGTGTGGCGTTGCTGTCGGTTCTGGCGGCATGT GGGGATCTGGGTGCGGTTGATTTAGGGGAGTGGGTGCACAGGTTTGTGGTCAGGCGGGGC TTGTGCCAGGAGATACCACTGATGAATTCGATCATAGACATGTACATGAAATGTGGGTGT ATTGAGAAAGCAGTGGAGGTGTTTGAGGGTATGGAGGAGAAGAGTGTCGTGACTTGGACG ACACTAATTGCTGGATTTGCATTGCATGGCCTCGGTTTGCAAGCTGTCGAGATGTTTTGC CGGATGGAGAGGGAGAATATGGCGCCGAATGCTGTTACTTTTCTTGCAATCTTGTCAGCG TGTAGTCATGTTGGACTAACTGATCTGGGTCGTTGGTATTTCAATATCATGGTCTCCCAG TACAGGATTAAGCCACGAGTTGAACATTATGGATGCATGGTTGATCTACTTGGTCGTGCT GGTTGTTTAAAGGAGGCCCAGGATTTAGTTAAGAACATGCCTTTGAAGGCAAATGCAGCA ATATGGGGAGCTCTTCTTGCTGCAGCTAGGACCCATGGTGATGCTGGCCTTGGAGAACAA GCCTTGCTGCACCTAATTGAGCTTGAGCCTAACAACAGTGGGAACTACATACTCCTGTCG AATATTTTTGCAGAACAGGAAAGGTGGGGTGATGTGAGCAAACTTCGAAAGGCTATGAGA GAAAGGGGACTGAGAAATGTGCCAGGGGCGAGTTCCATTGAAGTTGATGGCATGGTTCAT GAGTTCACTTCCAGGGATTGGTCTCATCCTTTCATACATACAATATGTGAAGTGTTATGT GAGATCGACACTAACATGAAATCTGTTGGTTTTGCTTCTGTTTTCCCTGAAGTACTACAT GTTATTGAAGAAGGCTAA

Peptide Sequence

PEP ID	Zm00001d008316_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:4970720:4972237:-1 gene:Zm00001d008316 transcript:Zm00001d008316_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPPSPPLSPALHRLLSFLPRLASPRHLLQAHAFLLPRGGQRDPRLLSALLLASLCLVPHS QQTSDHAAALLRRVYPSVYLRDVARLPPHLLRRSLLGQLHSLLLRTGHVASDAHVSSSLV QLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPERNVVSWTT VIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVRRG LCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFC RMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRA GCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEPNNSGNYILLS NIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWSHPFIHTICEVLC EIDTNMKSVGFASVFPEVLHVIEEG

Transcript Sequence

Transcript ID	Zm00001d008316_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:4970720:4972237:-1 gene:Zm00001d008316 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGTCCCCGCCACTGTCGCCTGCGCTTCATCGTCTCCTCTCCTTCCTCCCGCGT CTCGCCTCCCCACGGCACCTACTGCAGGCGCACGCCTTCCTCCTTCCCCGCGGCGGCCAA CGCGACCCGCGTCTCCTTTCCGCGCTCCTCCTCGCTTCCCTCTGCCTCGTGCCTCACTCG CAGCAAACCAGTGACCACGCCGCCGCGCTCCTCCGTCGTGTATACCCCTCTGTATACCTC AGGGACGTCGCGCGCCTCCCGCCGCATCTCCTCCGCAGGAGCCTCCTCGGCCAGCTCCAC TCCCTGCTCCTCCGCACCGGCCACGTGGCCTCCGACGCTCACGTCTCCTCCAGCCTCGTC CAACTGTACTGCACCTGCGGACATGTCGCCGACGCGCGCAGCGTGTTCGACGAGATGGCC GTCAGGGACGTTGTGGCCTGGAACGTTATGATCGCCGGCTATGTGAAGGCTGGGGACCAG GCCCACGCGCGGGAGCTGTTTGATGCTATGCCGGAGCGGAATGTGGTGTCGTGGACGACG GTGATCGGGGGGTACGCGCAGATGAAGCGTCCGGAGAAGGCAGTAGAGGTGTTTCGAAGG ATGCAGGTGGAGGGCATCGAGGCTGACGGTGTGGCGTTGCTGTCGGTTCTGGCGGCATGT GGGGATCTGGGTGCGGTTGATTTAGGGGAGTGGGTGCACAGGTTTGTGGTCAGGCGGGGC TTGTGCCAGGAGATACCACTGATGAATTCGATCATAGACATGTACATGAAATGTGGGTGT ATTGAGAAAGCAGTGGAGGTGTTTGAGGGTATGGAGGAGAAGAGTGTCGTGACTTGGACG ACACTAATTGCTGGATTTGCATTGCATGGCCTCGGTTTGCAAGCTGTCGAGATGTTTTGC CGGATGGAGAGGGAGAATATGGCGCCGAATGCTGTTACTTTTCTTGCAATCTTGTCAGCG TGTAGTCATGTTGGACTAACTGATCTGGGTCGTTGGTATTTCAATATCATGGTCTCCCAG TACAGGATTAAGCCACGAGTTGAACATTATGGATGCATGGTTGATCTACTTGGTCGTGCT GGTTGTTTAAAGGAGGCCCAGGATTTAGTTAAGAACATGCCTTTGAAGGCAAATGCAGCA ATATGGGGAGCTCTTCTTGCTGCAGCTAGGACCCATGGTGATGCTGGCCTTGGAGAACAA GCCTTGCTGCACCTAATTGAGCTTGAGCCTAACAACAGTGGGAACTACATACTCCTGTCG AATATTTTTGCAGAACAGGAAAGGTGGGGTGATGTGAGCAAACTTCGAAAGGCTATGAGA GAAAGGGGACTGAGAAATGTGCCAGGGGCGAGTTCCATTGAAGTTGATGGCATGGTTCAT GAGTTCACTTCCAGGGATTGGTCTCATCCTTTCATACATACAATATGTGAAGTGTTATGT GAGATCGACACTAACATGAAATCTGTTGGTTTTGCTTCTGTTTTCCCTGAAGTACTACAT GTTATTGAAGAAGGCTAA