Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008310_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:8:4832736:4841589:1 gene:Zm00001d008310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-1-monophosphatase

Sequence

ATGCTCTCCTCTTCCTCCTCCACCCACTCGGCCACCTCGCCCTTCCCCGGCCTCGCCTCC
GCAAACCCTAACCCCCGCTCTCGCCTCCTCCGCCTCCGCGCCGCCTCGCCCGTGTCGTCC
GCGGTCTTGAGCGCGAGTGGGCGCCAGCCGATGAGTACGGTTAGGGCCTCGTTCGCCGCT
GGGGCGGCCGGCCGGAGAGCTGCGGCAGTGGGGGAGTTGGCGACGGAGCGGCTGGTGGAG
GTGGCGCAGCGGGCGGCGGACGCTGCTGGGGAGGTGCTCAGGAAGTACTTCCGCCAGCGG
GTTGAGATCATCGACAAAGAGGACCACAGTCCTGTTACAATTGCAGATAGAGAAGCAGAA
GAAGCAATGGTGTCAGTTATACTGAAGAGCTTCCCTACTCATGCCATTTTTGGCGAGGAG
AATGGTTGGAGATGTGCAGAGAATTCTGCTGATTTTGTTTGGGTTTTGGATCCAATAGAT
GGAACGAAAAGTTTCATAACTGGCAAGCCTCTTTTTGGGACGCTTATAGCACTTTTGCAC
AATGGGAAGCCGGTTATTGGTGTCATTGACCAGCCAATCTTGCGAGAAAGATGGATTGGG
GTGGATGGAAAACAAACAACTTTGAACGGACAAGAAATATCTGTTCGCTCTTGTAATTTA
CTTGCACAAGCTTACTTATATACAACAAGCCCACATCTCTTTGAAGCAGATGCTGAAGAT
GCATTTATTCGTGTAAGGAATAAGGTGAAAGTCCCACTTTATGGCTGTGATTGTTATGCT
TATGCTCTTCTGGCTTCTGGTTTTGTGGATATTGTTGTTGAATCTGGTTTGAAGCCATAT
GATTTCCTCTCGCTGGTACCTGTCATTGAAGGAGCTGGAGGGTCAATAACTGATTGGAGA
GGGGACAAGCTCCATTGGCCTGTTACTGCAGAATCACGGCCCACAAGTTTTAACGTGGTA
GCAGCTGGGGATGCCCGTGTCCACAAAGAGGCCCTTGATGCGTTGCGGTGGCGCTAG

Peptide Sequence

PEP ID

Zm00001d008310_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:8:4832736:4841589:1 gene:Zm00001d008310 transcript:Zm00001d008310_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-1-monophosphatase

Sequence

MLSSSSSTHSATSPFPGLASANPNPRSRLLRLRAASPVSSAVLSASGRQPMSTVRASFAA
GAAGRRAAAVGELATERLVEVAQRAADAAGEVLRKYFRQRVEIIDKEDHSPVTIADREAE
EAMVSVILKSFPTHAIFGEENGWRCAENSADFVWVLDPIDGTKSFITGKPLFGTLIALLH
NGKPVIGVIDQPILRERWIGVDGKQTTLNGQEISVRSCNLLAQAYLYTTSPHLFEADAED
AFIRVRNKVKVPLYGCDCYAYALLASGFVDIVVESGLKPYDFLSLVPVIEGAGGSITDWR
GDKLHWPVTAESRPTSFNVVAAGDARVHKEALDALRWR

Transcript Sequence

Transcript ID

Zm00001d008310_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:4832736:4841589:1 gene:Zm00001d008310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inositol-1-monophosphatase

Sequence

CGTAAACAAAACCCACCACGTCGGCGTCGGCGCACCGCTGCTAGAGTGCTAGGTGCTCCG
AGCGTCATTCTCCGCCCCGACATTTAAACCTTGCTCCCGACAACCGCCGCCGACTCCTCC
CCAATGCTCTCCTCTTCCTCCTCCACCCACTCGGCCACCTCGCCCTTCCCCGGCCTCGCC
TCCGCAAACCCTAACCCCCGCTCTCGCCTCCTCCGCCTCCGCGCCGCCTCGCCCGTGTCG
TCCGCGGTCTTGAGCGCGAGTGGGCGCCAGCCGATGAGTACGGTTAGGGCCTCGTTCGCC
GCTGGGGCGGCCGGCCGGAGAGCTGCGGCAGTGGGGGAGTTGGCGACGGAGCGGCTGGTG
GAGGTGGCGCAGCGGGCGGCGGACGCTGCTGGGGAGGTGCTCAGGAAGTACTTCCGCCAG
CGGGTTGAGATCATCGACAAAGAGGACCACAGTCCTGTTACAATTGCAGATAGAGAAGCA
GAAGAAGCAATGGTGTCAGTTATACTGAAGAGCTTCCCTACTCATGCCATTTTTGGCGAG
GAGAATGGTTGGAGATGTGCAGAGAATTCTGCTGATTTTGTTTGGGTTTTGGATCCAATA
GATGGAACGAAAAGTTTCATAACTGGCAAGCCTCTTTTTGGGACGCTTATAGCACTTTTG
CACAATGGGAAGCCGGTTATTGGTGTCATTGACCAGCCAATCTTGCGAGAAAGATGGATT
GGGGTGGATGGAAAACAAACAACTTTGAACGGACAAGAAATATCTGTTCGCTCTTGTAAT
TTACTTGCACAAGCTTACTTATATACAACAAGCCCACATCTCTTTGAAGCAGATGCTGAA
GATGCATTTATTCGTGTAAGGAATAAGGTGAAAGTCCCACTTTATGGCTGTGATTGTTAT
GCTTATGCTCTTCTGGCTTCTGGTTTTGTGGATATTGTTGTTGAATCTGGTTTGAAGCCA
TATGATTTCCTCTCGCTGGTACCTGTCATTGAAGGAGCTGGAGGGTCAATAACTGATTGG
AGAGGGGACAAGCTCCATTGGCCTGTTACTGCAGAATCACGGCCCACAAGTTTTAACGTG
GTAGCAGCTGGGGATGCCCGTGTCCACAAAGAGGCCCTTGATGCGTTGCGGTGGCGCTAG
CGTGCTCTTTAGATAAGCATTATACTAATAACCAACTATTTAGACATTTACATGTGATAT
TTGTATGAACAATAATAAGCTTTACCTGTATGCTTGTTGGTTGGCCTCAACCTTTGCACT
AATAATAGATAGCTTGGTTGTAAACTACCAAGCAGTGGCTTGCTGTTTGCATCAAGCAGA
TATTATGTCTTGGGAATG